Carbamazepine_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbamazepine perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbamazepine_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.282724
PABPC1 poly(A) binding protein, cytoplasmic 1 0.221093
MYH9 myosin, heavy chain 9, non-muscle 0.220298
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.189315
APLP2 amyloid beta (A4) precursor-like protein 2 0.154114
CALR calreticulin 0.138436
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.116934
PLEC plectin 0.103089
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.100398
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0895975
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0853124
MSN moesin 0.0824226
VEGFA vascular endothelial growth factor A 0.0813036
PTMA prothymosin, alpha 0.0763797
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0673689
TMF1 TATA element modulatory factor 1 0.066275
TPM3 tropomyosin 3 0.0658542
TMSB4X thymosin beta 4, X-linked 0.065454
MYO6 myosin VI 0.0612105
EEF2 eukaryotic translation elongation factor 2 0.0606721
PCBP2 poly(rC) binding protein 2 0.0575917
IGFBP3 insulin-like growth factor binding protein 3 0.0574415
DSPP dentin sialophosphoprotein 0.0564875
G0S2 G0/G1 switch 2 0.0544357
ARRDC3 arrestin domain containing 3 0.0538452
YTHDC1 YTH domain containing 1 0.0534612
HSPA8 heat shock 70kDa protein 8 0.0509537
FLNA filamin A, alpha 0.049793
EEF1G eukaryotic translation elongation factor 1 gamma 0.0487719
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0486432
KRT18 keratin 18, type I 0.0474188
MCL1 myeloid cell leukemia 1 0.04492
CANX calnexin 0.0447384
ACTN4 actinin, alpha 4 0.0444331
RPL19 ribosomal protein L19 0.0435399
UBC ubiquitin C 0.043439
TACSTD2 tumor-associated calcium signal transducer 2 0.0426722
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0424869
LDHA lactate dehydrogenase A 0.042379
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0423068
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0418853
AKAP13 A kinase (PRKA) anchor protein 13 0.0408432
RPL7 ribosomal protein L7 0.0401303
CSNK1A1 casein kinase 1, alpha 1 0.0397531
CTSB cathepsin B 0.0388007
TSC22D2 TSC22 domain family, member 2 0.0386193
RAI14 retinoic acid induced 14 0.038391
RNF145 ring finger protein 145 0.0380574
RCOR1 REST corepressor 1 0.0380107
BHLHE40 basic helix-loop-helix family, member e40 0.037568
SPTBN1 spectrin, beta, non-erythrocytic 1 0.037303
SFTPA2 surfactant protein A2 0.0372506
PRRC2C proline-rich coiled-coil 2C 0.0369829
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.036245
VIM vimentin 0.0361453
LAMB3 laminin, beta 3 0.0357165
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0353043
BRD2 bromodomain containing 2 0.0352805
DDIT4 DNA-damage-inducible transcript 4 0.0350469
CD9 CD9 molecule 0.0350029
COPA coatomer protein complex, subunit alpha 0.0349006
HDGF hepatoma-derived growth factor 0.034821
RNF213 ring finger protein 213 0.0346878
LPP LIM domain containing preferred translocation partner in lipoma 0.034562
CTTN cortactin 0.0341745
FNBP4 formin binding protein 4 0.0339814
RPL3 ribosomal protein L3 0.0336135
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0333405
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0330838
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0328916
SOD2 superoxide dismutase 2, mitochondrial 0.0325405
ZSWIM6 zinc finger, SWIM-type containing 6 0.0322889
IRF6 interferon regulatory factor 6 0.0321057
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0317743
APP amyloid beta (A4) precursor protein 0.0317406
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0315696
MKRN1 makorin ring finger protein 1 0.0308752
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0306588
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0306029
POTEF POTE ankyrin domain family, member F 0.0302197
ADAM9 ADAM metallopeptidase domain 9 0.0300366
SET SET nuclear proto-oncogene 0.0297179
GRB10 growth factor receptor-bound protein 10 0.0296307
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0295114
FLNB filamin B, beta 0.0293555
SFPQ splicing factor proline/glutamine-rich 0.0287801
GPBP1 GC-rich promoter binding protein 1 0.0287195
KDM3A lysine (K)-specific demethylase 3A 0.0286667
CNN3 calponin 3, acidic 0.0285885
CSDE1 cold shock domain containing E1, RNA-binding 0.0284218
TPI1 triosephosphate isomerase 1 0.028277
PDLIM5 PDZ and LIM domain 5 0.0282653
MACF1 microtubule-actin crosslinking factor 1 0.0279905
DUSP5 dual specificity phosphatase 5 0.0277096
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0276804
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0276327
SEC23A Sec23 homolog A (S. cerevisiae) 0.0275804
HLA-A major histocompatibility complex, class I, A 0.0275677
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0275534
HSPA1B heat shock 70kDa protein 1B 0.0275046

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.282621
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.155432
ACTG1 actin gamma 1 -0.104343
TPT1 tumor protein, translationally-controlled 1 -0.0976874
RPL35A ribosomal protein L35a -0.0964486
RPL34 ribosomal protein L34 -0.0796482
TMSB10 thymosin beta 10 -0.067596
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0523279
NDRG1 N-myc downstream regulated 1 -0.0519391
RPS6 ribosomal protein S6 -0.0506418
RPL23 ribosomal protein L23 -0.0505683
RPLP1 ribosomal protein, large, P1 -0.0499366
RPL9 ribosomal protein L9 -0.0494076
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0484418
RPS24 ribosomal protein S24 -0.047151
RPLP0 ribosomal protein, large, P0 -0.0462543
ELL2 elongation factor, RNA polymerase II, 2 -0.0459586
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0451583
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0432132
TXNRD1 thioredoxin reductase 1 -0.0430594
NAMPT nicotinamide phosphoribosyltransferase -0.0423749
RPL32 ribosomal protein L32 -0.0361155
RPL12 ribosomal protein L12 -0.0347665
RPL30 ribosomal protein L30 -0.0345104
RPS21 ribosomal protein S21 -0.0341984
RACK1 receptor for activated C kinase 1 -0.0340542
RPS8 ribosomal protein S8 -0.0336909
ANKRD28 ankyrin repeat domain 28 -0.0331887
CCNI cyclin I -0.0330759
SDC4 syndecan 4 -0.0328262
MT2A metallothionein 2A -0.032274
RPL37 ribosomal protein L37 -0.0319552
RPL38 ribosomal protein L38 -0.0318056
RPL8 ribosomal protein L8 -0.0314154
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.031015
S100A10 S100 calcium binding protein A10 -0.0307251
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0302241
EFNA5 ephrin-A5 -0.0302022
ISG15 ISG15 ubiquitin-like modifier -0.0301931
RPS15 ribosomal protein S15 -0.029077
RPS19 ribosomal protein S19 -0.0288202
CD2AP CD2-associated protein -0.0286398
RUNX1 runt-related transcription factor 1 -0.0285334
RPL11 ribosomal protein L11 -0.0281717
RPS13 ribosomal protein S13 -0.0272706
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0272503
MGST1 microsomal glutathione S-transferase 1 -0.0270456
TM4SF1 transmembrane 4 L six family member 1 -0.0270414
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.026762
KIAA1217 KIAA1217 -0.0265537
RPS23 ribosomal protein S23 -0.0264148
RPS27A ribosomal protein S27a -0.0263807
LOC112694756 uncharaterized LOC112694756 -0.0262119
SYT1 synaptotagmin I -0.0260539
TMEM263 transmembrane protein 263 -0.025394
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.025236
NPEPPS aminopeptidase puromycin sensitive -0.025227
OSMR oncostatin M receptor -0.0250728
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0248838
GNAS GNAS complex locus -0.0248454
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.024744
AHNAK AHNAK nucleoprotein -0.024706
RPS5 ribosomal protein S5 -0.024582
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0243586
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0240491
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0240119
NRIP1 nuclear receptor interacting protein 1 -0.0235934
FAM3C family with sequence similarity 3, member C -0.0235857
S100A9 S100 calcium binding protein A9 -0.0235241
RPL28 ribosomal protein L28 -0.0229784
GNA13 guanine nucleotide binding protein (G protein), alpha 13 -0.0229392
ZFR zinc finger RNA binding protein -0.022877
FHIT fragile histidine triad -0.0228588
CDK17 cyclin-dependent kinase 17 -0.0228464
EGR1 early growth response 1 -0.0225691
GARS1 glycyl-tRNA synthetase 1 -0.0223219
ATXN1 ataxin 1 -0.0221704
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0221097
HMGB1 high mobility group box 1 -0.0219303
WSB1 WD repeat and SOCS box containing 1 -0.0216317
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0214978
RPL31 ribosomal protein L31 -0.0214547
PARD3 par-3 family cell polarity regulator -0.0213728
IL6ST interleukin 6 signal transducer -0.0210814
KRT7 keratin 7, type II -0.0206562
RPS29 ribosomal protein S29 -0.0204532
MATR3 matrin 3 -0.0204366
DLG1 discs, large homolog 1 (Drosophila) -0.020391
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0202217
RPL27 ribosomal protein L27 -0.0201773
CHMP2B charged multivesicular body protein 2B -0.0201257
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0200949
NPC2 Niemann-Pick disease, type C2 -0.0200592
IFI27 interferon, alpha-inducible protein 27 -0.0195808
RPL26 ribosomal protein L26 -0.019485
IFI16 interferon, gamma-inducible protein 16 -0.0194608
FTH1 ferritin, heavy polypeptide 1 -0.0194413
ZNF292 zinc finger protein 292 -0.0193621
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0193079
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0193068