Carbamazepine_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbamazepine perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbamazepine_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.10148
FN1 fibronectin 1 0.0965593
COL6A3 collagen, type VI, alpha 3 0.0820282
TGFBI transforming growth factor, beta-induced, 68kDa 0.0770374
SOD2 superoxide dismutase 2, mitochondrial 0.0744722
NAMPT nicotinamide phosphoribosyltransferase 0.0529826
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0517439
TNIP1 TNFAIP3 interacting protein 1 0.0504822
ERRFI1 ERBB receptor feedback inhibitor 1 0.0495016
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0491878
JARID2 jumonji, AT rich interactive domain 2 0.0481151
MSN moesin 0.0462175
CTNND1 catenin (cadherin-associated protein), delta 1 0.0457919
IL6 interleukin 6 0.0451377
TRIO trio Rho guanine nucleotide exchange factor 0.0437761
RPL19 ribosomal protein L19 0.0427673
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0422467
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0413409
CALR calreticulin 0.039187
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0382303
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0359809
RUNX1 runt-related transcription factor 1 0.0346147
IRAK2 interleukin-1 receptor-associated kinase 2 0.034499
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0339415
SETD5 SET domain containing 5 0.0334844
ZC3H11A zinc finger CCCH-type containing 11A 0.0326632
IQGAP1 IQ motif containing GTPase activating protein 1 0.0322612
YTHDC1 YTH domain containing 1 0.031757
ANXA5 annexin A5 0.031131
UBE2B ubiquitin-conjugating enzyme E2B 0.0306061
RNMT RNA (guanine-7-) methyltransferase 0.0305692
CCNL1 cyclin L1 0.0299101
BBX bobby sox homolog (Drosophila) 0.0297379
NAV2 neuron navigator 2 0.0295851
APLP2 amyloid beta (A4) precursor-like protein 2 0.0293801
ARRDC3 arrestin domain containing 3 0.0293248
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0291747
GPR107 G protein-coupled receptor 107 0.0289226
SAMD4A sterile alpha motif domain containing 4A 0.0287886
SEC24B SEC24 family member B 0.0281902
COL6A1 collagen, type VI, alpha 1 0.0280433
NAP1L1 nucleosome assembly protein 1-like 1 0.0280259
ATP13A3 ATPase type 13A3 0.0279746
UBA6 ubiquitin-like modifier activating enzyme 6 0.0279289
LIMS1 LIM and senescent cell antigen-like domains 1 0.0272379
TRA2A transformer 2 alpha homolog (Drosophila) 0.0271743
FMNL2 formin-like 2 0.0271446
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0270075
FBN1 fibrillin 1 0.0263765
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0263118
PLEC plectin 0.0262479
NUP54 nucleoporin 54kDa 0.0261971
TLN1 talin 1 0.0261754
EWSR1 EWS RNA-binding protein 1 0.0258328
SPPL3 signal peptide peptidase like 3 0.0258284
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.025138
PRRC2C proline-rich coiled-coil 2C 0.024606
RNF145 ring finger protein 145 0.0242407
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0241607
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0241219
DST dystonin 0.0240569
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0240472
MCL1 myeloid cell leukemia 1 0.0238764
AVL9 AVL9 homolog (S. cerevisiase) 0.023857
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0236289
FNDC3B fibronectin type III domain containing 3B 0.0234965
RNF114 ring finger protein 114 0.0234731
UBAP2L ubiquitin associated protein 2-like 0.0233501
AMPD3 adenosine monophosphate deaminase 3 0.0230867
GGNBP2 gametogenetin binding protein 2 0.0230416
FAM13A family with sequence similarity 13, member A 0.0229757
RPL37 ribosomal protein L37 0.0227586
IGFBP5 insulin-like growth factor binding protein 5 0.0224767
WDR26 WD repeat domain 26 0.0223853
IGF2 insulin-like growth factor 2 0.0223574
NKTR natural killer cell triggering receptor 0.0223339
WIPF2 WAS/WASL interacting protein family, member 2 0.0222952
MSI2 musashi RNA-binding protein 2 0.0222769
RYBP RING1 and YY1 binding protein 0.0222399
FLNA filamin A, alpha 0.0221275
BTBD9 BTB (POZ) domain containing 9 0.0221143
CYLD cylindromatosis (turban tumor syndrome) 0.0221142
YME1L1 YME1-like 1 ATPase 0.0221082
ABI3BP ABI family, member 3 (NESH) binding protein 0.0220296
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0219754
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.0219041
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0218647
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0217165
HYOU1 hypoxia up-regulated 1 0.0216561
RORA RAR-related orphan receptor A 0.0212935
MMP12 matrix metallopeptidase 12 0.0210435
CTTNBP2NL CTTNBP2 N-terminal like 0.0209983
USP36 ubiquitin specific peptidase 36 0.0208165
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0204174
TPM3 tropomyosin 3 0.0203828
BASP1 brain abundant, membrane attached signal protein 1 0.0203531
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0203514
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0203459
WDR1 WD repeat domain 1 0.0201729
RBM27 RNA binding motif protein 27 0.0200532

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.299969
MT2A metallothionein 2A -0.144813
MAP1B microtubule-associated protein 1B -0.106423
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0947012
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0933239
HLA-B major histocompatibility complex, class I, B -0.0878498
COL1A1 collagen, type I, alpha 1 -0.0816346
TMSB10 thymosin beta 10 -0.078037
POTEF POTE ankyrin domain family, member F -0.0650036
FTH1 ferritin, heavy polypeptide 1 -0.0633335
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.055307
STC1 stanniocalcin 1 -0.0541131
LOC112694756 uncharaterized LOC112694756 -0.051645
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0511794
ELL2 elongation factor, RNA polymerase II, 2 -0.0506457
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0494913
COL1A2 collagen, type I, alpha 2 -0.0466703
MYOF myoferlin -0.0454316
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0451929
CALU calumenin -0.0447901
CANX calnexin -0.0447585
S100A10 S100 calcium binding protein A10 -0.0415921
RRBP1 ribosome binding protein 1 -0.040346
HLA-C major histocompatibility complex, class I, C -0.0402036
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0397338
PSD3 pleckstrin and Sec7 domain containing 3 -0.0395588
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0394957
GLIS3 GLIS family zinc finger 3 -0.0394484
ENO1 enolase 1, (alpha) -0.0394386
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0394031
ANXA2 annexin A2 -0.0387159
KMT2C lysine (K)-specific methyltransferase 2C -0.0376297
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0376009
CCNI cyclin I -0.0367572
GNAS GNAS complex locus -0.0367555
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0359716
CDK6 cyclin-dependent kinase 6 -0.0359489
UGCG UDP-glucose ceramide glucosyltransferase -0.035379
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0349933
AKAP12 A kinase (PRKA) anchor protein 12 -0.0340137
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0339681
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0339439
FAM20C family with sequence similarity 20, member C -0.0332565
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0325531
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0325175
RPL28 ribosomal protein L28 -0.0313343
AHNAK AHNAK nucleoprotein -0.0313303
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0312883
SEPTIN7 septin 7 -0.0312776
SRP54 signal recognition particle 54kDa -0.0309924
MT1X metallothionein 1X -0.0300037
F3 coagulation factor III (thromboplastin, tissue factor) -0.0296792
HMGB1 high mobility group box 1 -0.0295288
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0294349
CD44 CD44 molecule (Indian blood group) -0.0282785
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0281236
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0280113
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.027417
SON SON DNA binding protein -0.0273428
PRSS23 protease, serine, 23 -0.0272154
RPS23 ribosomal protein S23 -0.0270978
GLG1 golgi glycoprotein 1 -0.0270976
SEC24D SEC24 family member D -0.0270876
LMAN1 lectin, mannose-binding, 1 -0.0266828
RAD51B RAD51 paralog B -0.0265166
IGFBP3 insulin-like growth factor binding protein 3 -0.0264767
EXOC4 exocyst complex component 4 -0.026466
TUBA1B tubulin, alpha 1b -0.0259734
TUBB tubulin, beta class I -0.025882
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0256406
RPS21 ribosomal protein S21 -0.0250219
ANKRD17 ankyrin repeat domain 17 -0.0250167
S100A9 S100 calcium binding protein A9 -0.0247328
DIAPH3 diaphanous-related formin 3 -0.0247273
HM13 histocompatibility (minor) 13 -0.0245492
ARF1 ADP-ribosylation factor 1 -0.0244715
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0242987
LDHA lactate dehydrogenase A -0.0239582
FTL ferritin, light polypeptide -0.0237436
PKM pyruvate kinase, muscle -0.0236611
S100A6 S100 calcium binding protein A6 -0.0236147
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0236046
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 -0.0234962
MEF2A myocyte enhancer factor 2A -0.0232986
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0232258
INTS6 integrator complex subunit 6 -0.0230585
H3-3B H3.3 histone B -0.0229401
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0228869
NAV1 neuron navigator 1 -0.0228829
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0226715
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0225634
LARP1B La ribonucleoprotein domain family, member 1B -0.0225366
EIF5B eukaryotic translation initiation factor 5B -0.0224955
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0224909
PTMA prothymosin, alpha -0.0224717
UBC ubiquitin C -0.022372
MON2 MON2 homolog (S. cerevisiae) -0.0221938
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0219988
SEPTIN2 septin 2 -0.0219039
MBD5 methyl-CpG binding domain protein 5 -0.0218241