Carbidopa (monohydrate)_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbidopa (monohydrate) perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbidopa (monohydrate)_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GMDS GDP-mannose 4,6-dehydratase 0.132062
PDIA3 protein disulfide isomerase family A, member 3 0.111334
P4HB prolyl 4-hydroxylase, beta polypeptide 0.104503
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.102199
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0934138
MAML2 mastermind-like 2 (Drosophila) 0.0817845
CEMIP cell migration inducing protein, hyaluronan binding 0.0815895
EHBP1 EH domain binding protein 1 0.0787525
TMC5 transmembrane channel-like 5 0.074839
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0639167
BCL2L1 BCL2-like 1 0.0633279
ITGA6 integrin, alpha 6 0.063101
VEGFA vascular endothelial growth factor A 0.0614671
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0588472
RNF213 ring finger protein 213 0.0537849
YAP1 Yes-associated protein 1 0.0536147
ATXN1 ataxin 1 0.0481342
CD46 CD46 molecule, complement regulatory protein 0.04754
PKM pyruvate kinase, muscle 0.0473032
AHR aryl hydrocarbon receptor 0.0441609
AKAP9 A kinase (PRKA) anchor protein 9 0.0441143
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.043358
MAGT1 magnesium transporter 1 0.0426142
CLDN7 claudin 7 0.0425721
AGR2 anterior gradient 2 0.0422202
CCNL1 cyclin L1 0.0417418
PTPRK protein tyrosine phosphatase, receptor type, K 0.0414754
TNS4 tensin 4 0.0410255
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0405974
NDRG1 N-myc downstream regulated 1 0.0392768
ITGB4 integrin, beta 4 0.039052
MCU mitochondrial calcium uniporter 0.0382358
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 0.0376063
ARHGAP32 Rho GTPase activating protein 32 0.0375617
SHROOM3 shroom family member 3 0.037504
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0366939
TNRC18 trinucleotide repeat containing 18 0.0363078
ASPH aspartate beta-hydroxylase 0.0360915
ARHGAP29 Rho GTPase activating protein 29 0.0357877
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.0357167
TNIK TRAF2 and NCK interacting kinase 0.035267
ACTN4 actinin, alpha 4 0.0346327
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0345778
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0344347
CEMIP2 cell migration inducing hyaluronidase 2 0.0341924
SAMD12 sterile alpha motif domain containing 12 0.0341778
PPARG peroxisome proliferator-activated receptor gamma 0.0338043
PDIA6 protein disulfide isomerase family A, member 6 0.0337754
BIRC6 baculoviral IAP repeat containing 6 0.0328916
PTEN phosphatase and tensin homolog 0.0328104
FNDC3B fibronectin type III domain containing 3B 0.0328042
BPTF bromodomain PHD finger transcription factor 0.0327051
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0322428
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0318103
NF1 neurofibromin 1 0.0317046
ATP11A ATPase, class VI, type 11A 0.0309782
MECOM MDS1 and EVI1 complex locus 0.0309599
TMEM123 transmembrane protein 123 0.0308885
NPSR1 neuropeptide S receptor 1 0.030879
MUC17 mucin 17, cell surface associated 0.0305939
MACF1 microtubule-actin crosslinking factor 1 0.0302764
WWC1 WW and C2 domain containing 1 0.0302386
ADAM9 ADAM metallopeptidase domain 9 0.0299031
KMT2E lysine (K)-specific methyltransferase 2E 0.029868
NCOR1 nuclear receptor corepressor 1 0.0294586
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0292819
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.029188
MBNL1 muscleblind-like splicing regulator 1 0.0287658
MTUS1 microtubule associated tumor suppressor 1 0.0286438
ZCCHC7 zinc finger, CCHC domain containing 7 0.0284614
RNF43 ring finger protein 43 0.0284497
TRAK1 trafficking protein, kinesin binding 1 0.0281474
TRAM1 translocation associated membrane protein 1 0.0279903
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0276942
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0276364
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0276254
KDM4C lysine (K)-specific demethylase 4C 0.0274178
NFIB nuclear factor I/B 0.0273485
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.027209
UBE2H ubiquitin-conjugating enzyme E2H 0.0270934
ANKRD17 ankyrin repeat domain 17 0.0270615
IL1RAP interleukin 1 receptor accessory protein 0.0267486
FAM135A family with sequence similarity 135, member A 0.0264702
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.0260356
ENC1 ectodermal-neural cortex 1 (with BTB domain) 0.0259127
ZNF292 zinc finger protein 292 0.0253861
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type 0.0253372
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0252825
LIMA1 LIM domain and actin binding 1 0.0251589
SMC5 structural maintenance of chromosomes 5 0.0251436
AOPEP aminopeptidase O (putative) 0.0251257
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.025036
ZNF652 zinc finger protein 652 0.0250181
SEPTIN9 septin 9 0.0246076
MBNL2 muscleblind-like splicing regulator 2 0.0245259
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0245165
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0244871
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0244859
ATM ATM serine/threonine kinase 0.0244247
ZNF148 zinc finger protein 148 0.0243748

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.140799
TPT1 tumor protein, translationally-controlled 1 -0.102645
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0984363
TMSB10 thymosin beta 10 -0.0864823
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0843173
PDIA4 protein disulfide isomerase family A, member 4 -0.0834227
FTH1 ferritin, heavy polypeptide 1 -0.0722871
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0719332
RPL35A ribosomal protein L35a -0.0710628
RPL23 ribosomal protein L23 -0.0606782
FTL ferritin, light polypeptide -0.0600829
EMP1 epithelial membrane protein 1 -0.0536133
RPL12 ribosomal protein L12 -0.0529733
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0503891
KDM3A lysine (K)-specific demethylase 3A -0.0501899
RPLP1 ribosomal protein, large, P1 -0.048783
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0457847
KRT18 keratin 18, type I -0.0452743
PTMA prothymosin, alpha -0.0436701
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0436473
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0431495
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0429248
HMGB2 high mobility group box 2 -0.0398115
FGFR2 fibroblast growth factor receptor 2 -0.0393935
RPS3 ribosomal protein S3 -0.0371105
RPS27A ribosomal protein S27a -0.0370065
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0366136
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0362356
CALR calreticulin -0.0361901
ANXA1 annexin A1 -0.0359782
EPCAM epithelial cell adhesion molecule -0.0354759
AHNAK AHNAK nucleoprotein -0.0351427
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0347562
TES testin LIM domain protein -0.0343584
RAD21 RAD21 homolog (S. pombe) -0.0343067
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.033507
SQSTM1 sequestosome 1 -0.0332893
HSPA8 heat shock 70kDa protein 8 -0.0328852
RPL34 ribosomal protein L34 -0.0323414
RPS19 ribosomal protein S19 -0.0320267
RPL18 ribosomal protein L18 -0.0306948
RPL26 ribosomal protein L26 -0.030609
RPL11 ribosomal protein L11 -0.0304821
CCDC47 coiled-coil domain containing 47 -0.0303591
EZR ezrin -0.0300195
HLA-C major histocompatibility complex, class I, C -0.0299943
RPL19 ribosomal protein L19 -0.029748
CALU calumenin -0.0295675
HDLBP high density lipoprotein binding protein -0.0291712
EIF4H eukaryotic translation initiation factor 4H -0.0286955
NFE2L1 nuclear factor, erythroid 2-like 1 -0.0284493
SERINC1 serine incorporator 1 -0.0284095
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma -0.0282657
EIF1 eukaryotic translation initiation factor 1 -0.0280673
SRPRA SRP receptor subunit alpha -0.028
RPS25 ribosomal protein S25 -0.0277586
ACTG1 actin gamma 1 -0.0274776
COTL1 coactosin-like F-actin binding protein 1 -0.0273933
CANX calnexin -0.0270737
RPL13A ribosomal protein L13a -0.0269608
RPL36A ribosomal protein L36a -0.0266466
RPLP0 ribosomal protein, large, P0 -0.0265486
DSPP dentin sialophosphoprotein -0.0264427
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0262225
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0259777
GSTP1 glutathione S-transferase pi 1 -0.025623
RPS12 ribosomal protein S12 -0.0253609
LPP LIM domain containing preferred translocation partner in lipoma -0.0249687
RPL35 ribosomal protein L35 -0.0248267
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0244421
RPL31 ribosomal protein L31 -0.024183
RPLP2 ribosomal protein, large, P2 -0.0241448
LAMB3 laminin, beta 3 -0.02378
KRT7 keratin 7, type II -0.0237253
MYH9 myosin, heavy chain 9, non-muscle -0.0235629
TMED2 transmembrane emp24 domain trafficking protein 2 -0.0232942
MYL12B myosin, light chain 12B, regulatory -0.0230207
SPAG9 sperm associated antigen 9 -0.022513
RPS4X ribosomal protein S4, X-linked -0.0225066
RPS24 ribosomal protein S24 -0.0225009
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0224152
VIM vimentin -0.0220863
RPS27 ribosomal protein S27 -0.0217508
CD9 CD9 molecule -0.0217267
ENO1 enolase 1, (alpha) -0.0217254
RPL27 ribosomal protein L27 -0.0217244
WSB1 WD repeat and SOCS box containing 1 -0.0216586
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.02141
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0213169
RPL32 ribosomal protein L32 -0.0212818
ANKRD10 ankyrin repeat domain 10 -0.0210595
STAU1 staufen double-stranded RNA binding protein 1 -0.0210391
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0210315
SUN1 Sad1 and UNC84 domain containing 1 -0.0209546
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.0209177
ATP5F1E ATP synthase F1 subunit epsilon -0.0207598
UBB ubiquitin B -0.020698
HLA-E major histocompatibility complex, class I, E -0.0203839
RPS16 ribosomal protein S16 -0.0202439
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 -0.0201013