Carbidopa (monohydrate)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbidopa (monohydrate) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbidopa (monohydrate)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.288277
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.229546
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.125535
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0815791
ACTG1 actin gamma 1 0.073103
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0710413
NDRG1 N-myc downstream regulated 1 0.0653073
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0592263
EFNA5 ephrin-A5 0.0579787
MMP12 matrix metallopeptidase 12 0.05328
WSB1 WD repeat and SOCS box containing 1 0.0528134
PTMA prothymosin, alpha 0.0510382
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.049395
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0448789
FNDC3B fibronectin type III domain containing 3B 0.0446482
RPS6 ribosomal protein S6 0.0441425
NF1 neurofibromin 1 0.043125
RPL23 ribosomal protein L23 0.0422037
CD109 CD109 molecule 0.0421763
TXNIP thioredoxin interacting protein 0.0409554
TMSB10 thymosin beta 10 0.0405876
GPC6 glypican 6 0.0405496
LIMCH1 LIM and calponin homology domains 1 0.039552
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0392658
RPS20 ribosomal protein S20 0.0360654
BIRC6 baculoviral IAP repeat containing 6 0.0359166
RPS19 ribosomal protein S19 0.0355852
RPL35A ribosomal protein L35a 0.0342651
RPS25 ribosomal protein S25 0.033785
RPL37A ribosomal protein L37a 0.033422
PHIP pleckstrin homology domain interacting protein 0.0330217
PTPRD protein tyrosine phosphatase, receptor type, D 0.0330055
BTG1 B-cell translocation gene 1, anti-proliferative 0.0312013
UGCG UDP-glucose ceramide glucosyltransferase 0.030645
RPLP2 ribosomal protein, large, P2 0.0303914
MT2A metallothionein 2A 0.0302155
FTL ferritin, light polypeptide 0.0292157
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0290441
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0288665
RPS27A ribosomal protein S27a 0.028748
RAB6A RAB6A, member RAS oncogene family 0.0279624
RPS3 ribosomal protein S3 0.0279431
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.027679
RPS23 ribosomal protein S23 0.0276764
RPLP1 ribosomal protein, large, P1 0.0274222
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0273651
PKM pyruvate kinase, muscle 0.0271643
MXI1 MAX interactor 1, dimerization protein 0.0271518
NLGN1 neuroligin 1 0.0267682
ZMYM2 zinc finger, MYM-type 2 0.0267364
WDR45B WD repeat domain 45B 0.0265254
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0265134
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0263607
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.0260777
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 0.0259591
ANO6 anoctamin 6 0.025794
LIMS1 LIM and senescent cell antigen-like domains 1 0.0257243
TRPS1 trichorhinophalangeal syndrome I 0.0256258
SETD5 SET domain containing 5 0.0254726
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0253166
MYOF myoferlin 0.0253075
CENPF centromere protein F, 350/400kDa 0.0249729
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0249689
RPS13 ribosomal protein S13 0.0248901
PNRC1 proline-rich nuclear receptor coactivator 1 0.0248459
NAP1L1 nucleosome assembly protein 1-like 1 0.024584
PTPRG protein tyrosine phosphatase, receptor type, G 0.024367
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.024286
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0242777
RPL19 ribosomal protein L19 0.0241098
ATXN1 ataxin 1 0.024095
SBF2 SET binding factor 2 0.0238669
VDAC1 voltage-dependent anion channel 1 0.0238005
ZNF638 zinc finger protein 638 0.0232296
RPL7A ribosomal protein L7a 0.0227997
RPL5 ribosomal protein L5 0.0226339
ZNF207 zinc finger protein 207 0.0225988
KDM2A lysine (K)-specific demethylase 2A 0.0225339
FBXL20 F-box and leucine-rich repeat protein 20 0.0223594
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0219636
RPL36A ribosomal protein L36a 0.02193
CDK19 cyclin-dependent kinase 19 0.0216864
CDC27 cell division cycle 27 0.0215249
ATXN2 ataxin 2 0.0213674
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.021342
NGLY1 N-glycanase 1 0.0213194
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0212272
KPNB1 karyopherin (importin) beta 1 0.0209504
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0209147
LDHA lactate dehydrogenase A 0.0209065
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa 0.0208346
UBE2K ubiquitin-conjugating enzyme E2K 0.0205598
USP34 ubiquitin specific peptidase 34 0.0202828
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0202071
CCNI cyclin I 0.0201321
NBEAL1 neurobeachin-like 1 0.0201163
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0200562
STC1 stanniocalcin 1 0.0200221
RPS17 ribosomal protein S17 0.0200081
RPLP0 ribosomal protein, large, P0 0.0199101

decreased expression

Symbol Name Standardized Value
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0672209
EXT1 exostosin glycosyltransferase 1 -0.0663006
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0584081
ASPH aspartate beta-hydroxylase -0.0576025
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0548841
JMJD1C jumonji domain containing 1C -0.0509942
RTN4 reticulon 4 -0.0509779
NAMPT nicotinamide phosphoribosyltransferase -0.0509312
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0495766
FRMD6 FERM domain containing 6 -0.0441327
NABP1 nucleic acid binding protein 1 -0.0436522
KYNU kynureninase -0.0408979
WDR43 WD repeat domain 43 -0.0383503
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.037441
HMGA2 high mobility group AT-hook 2 -0.0373879
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0354201
NTM neurotrimin -0.0343998
CALD1 caldesmon 1 -0.03204
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0317244
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0309167
BIRC2 baculoviral IAP repeat containing 2 -0.0302105
CDK6 cyclin-dependent kinase 6 -0.0301903
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0298459
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0296628
DSCAM Down syndrome cell adhesion molecule -0.0296255
PPP1R15A protein phosphatase 1, regulatory subunit 15A -0.0294478
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.029168
AKAP12 A kinase (PRKA) anchor protein 12 -0.0289953
RPS2 ribosomal protein S2 -0.0287329
GLS2 glutaminase 2 (liver, mitochondrial) -0.0282057
RPL4 ribosomal protein L4 -0.0280185
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0275704
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0273401
KIAA1217 KIAA1217 -0.0271921
MCTP1 multiple C2 domains, transmembrane 1 -0.0271083
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0266714
HDAC9 histone deacetylase 9 -0.0265587
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0265395
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0263504
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0262173
PUM2 pumilio RNA-binding family member 2 -0.0254989
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0252082
CD163L1 CD163 molecule-like 1 -0.0250621
ANTXR2 anthrax toxin receptor 2 -0.024842
RASA2 RAS p21 protein activator 2 -0.024657
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0246081
CUL3 cullin 3 -0.0244812
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0244761
RPL6 ribosomal protein L6 -0.0243641
BLZF1 basic leucine zipper nuclear factor 1 -0.0240345
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0239562
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0235991
ADAM19 ADAM metallopeptidase domain 19 -0.0232953
DOCK4 dedicator of cytokinesis 4 -0.0232406
CORO1C coronin, actin binding protein, 1C -0.0232144
CD44 CD44 molecule (Indian blood group) -0.023057
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0229729
EGR1 early growth response 1 -0.0224781
TEX10 testis expressed 10 -0.0221719
ENKUR enkurin, TRPC channel interacting protein -0.0218153
PRRC2B proline-rich coiled-coil 2B -0.0215165
QKI QKI, KH domain containing, RNA binding -0.0214813
CRY1 cryptochrome circadian clock 1 -0.0213352
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0212342
TXNRD1 thioredoxin reductase 1 -0.0210113
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0208602
PRKG1 protein kinase, cGMP-dependent, type I -0.0204427
TNNC1 troponin C type 1 (slow) -0.0204188
TPM3 tropomyosin 3 -0.0201411
WDFY2 WD repeat and FYVE domain containing 2 -0.02008
ZNF804A zinc finger protein 804A -0.0199842
YBX1 Y box binding protein 1 -0.0198958
ZEB1 zinc finger E-box binding homeobox 1 -0.0198882
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0197879
CDK17 cyclin-dependent kinase 17 -0.0196195
PLS3 plastin 3 -0.0195866
MARCHF4 membrane associated ring-CH-type finger 4 -0.0195175
H1-4 H1.4 linker histone, cluster member -0.0194952
TRA2B transformer 2 beta homolog (Drosophila) -0.0191853
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0191657
BCLAF1 BCL2-associated transcription factor 1 -0.0189828
MYO10 myosin X -0.0188686
XRN2 5'-3' exoribonuclease 2 -0.0186936
MACF1 microtubule-actin crosslinking factor 1 -0.0181975
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0181412
TRIO trio Rho guanine nucleotide exchange factor -0.0180379
RAB7A RAB7A, member RAS oncogene family -0.0179736
CCNL1 cyclin L1 -0.0179179
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0179112
IL6ST interleukin 6 signal transducer -0.0178496
EPC2 enhancer of polycomb homolog 2 (Drosophila) -0.0175889
MSN moesin -0.0175612
FN1 fibronectin 1 -0.0173869
SAMD3 sterile alpha motif domain containing 3 -0.0172933
NAV3 neuron navigator 3 -0.0171703
YBX3 Y box binding protein 3 -0.0171332
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0168625
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0168544
MCL1 myeloid cell leukemia 1 -0.0168401
ESM1 endothelial cell-specific molecule 1 -0.0167762