Carbidopa (monohydrate)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbidopa (monohydrate) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbidopa (monohydrate)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.171564
VIM vimentin 0.151595
STC1 stanniocalcin 1 0.142571
TIMP3 TIMP metallopeptidase inhibitor 3 0.118773
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.106074
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0899277
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0812451
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0751613
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0692869
COL1A2 collagen, type I, alpha 2 0.0683648
CD109 CD109 molecule 0.0646885
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0574076
TENT5A terminal nucleotidyltransferase 5A 0.0564474
WSB1 WD repeat and SOCS box containing 1 0.0561708
DLG1 discs, large homolog 1 (Drosophila) 0.0511421
FAM13A family with sequence similarity 13, member A 0.0481465
ZBTB20 zinc finger and BTB domain containing 20 0.0479027
ESYT2 extended synaptotagmin-like protein 2 0.045464
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0445877
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0439915
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0410855
ITCH itchy E3 ubiquitin protein ligase 0.0404248
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0400242
RAB6A RAB6A, member RAS oncogene family 0.0392706
CDK19 cyclin-dependent kinase 19 0.0384902
UBA6 ubiquitin-like modifier activating enzyme 6 0.0379829
ZNF395 zinc finger protein 395 0.0377472
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0375668
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0375074
FNDC3B fibronectin type III domain containing 3B 0.0364525
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 0.036154
SNX14 sorting nexin 14 0.0360058
PGK1 phosphoglycerate kinase 1 0.0350978
TGFBI transforming growth factor, beta-induced, 68kDa 0.0337372
TMEM178B transmembrane protein 178B 0.0337155
CDCP1 CUB domain containing protein 1 0.033151
INSIG2 insulin induced gene 2 0.0319526
MCTP2 multiple C2 domains, transmembrane 2 0.031946
NRP1 neuropilin 1 0.0315773
ELL2 elongation factor, RNA polymerase II, 2 0.030923
JARID2 jumonji, AT rich interactive domain 2 0.0307123
PLIN2 perilipin 2 0.0304609
SETD5 SET domain containing 5 0.0303627
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0299873
IGFBP3 insulin-like growth factor binding protein 3 0.029524
IGFBP5 insulin-like growth factor binding protein 5 0.0294119
TRAM2 translocation associated membrane protein 2 0.0285666
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0282405
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0281984
ZMYND8 zinc finger, MYND-type containing 8 0.0280757
ERRFI1 ERBB receptor feedback inhibitor 1 0.0271136
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.026938
LMAN1 lectin, mannose-binding, 1 0.0262423
ZNF148 zinc finger protein 148 0.0257027
XPO1 exportin 1 0.0252897
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0252325
FBXO42 F-box protein 42 0.0252021
IKBIP IKBKB interacting protein 0.0249373
PDE10A phosphodiesterase 10A 0.0240905
NBEAL1 neurobeachin-like 1 0.0239954
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0238281
EHD2 EH-domain containing 2 0.0236918
ARL4C ADP-ribosylation factor-like 4C 0.0235948
NGLY1 N-glycanase 1 0.0234621
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0231878
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 0.0223532
FAM162A family with sequence similarity 162, member A 0.0222883
ARHGAP35 Rho GTPase activating protein 35 0.0219775
KMT2C lysine (K)-specific methyltransferase 2C 0.0216574
COPA coatomer protein complex, subunit alpha 0.0216385
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0214867
SNX13 sorting nexin 13 0.0213087
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 0.0210498
TMEM158 transmembrane protein 158 (gene/pseudogene) 0.0210101
ANKH ANKH inorganic pyrophosphate transport regulator 0.0209505
SKIC3 SKI3 subunit of superkiller complex 0.0209277
LNPK lunapark, ER junction formation factor 0.0207653
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0207594
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0207043
WDR45B WD repeat domain 45B 0.0202452
INSIG1 insulin induced gene 1 0.0200879
USP34 ubiquitin specific peptidase 34 0.020038
TBC1D20 TBC1 domain family, member 20 0.0199372
CHD1L chromodomain helicase DNA binding protein 1-like 0.0198878
CDC27 cell division cycle 27 0.0198616
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.0197241
PHF20 PHD finger protein 20 0.0196539
NUCB2 nucleobindin 2 0.0195772
SH3PXD2B SH3 and PX domains 2B 0.0195743
LOXL2 lysyl oxidase-like 2 0.0195402
NPEPPS aminopeptidase puromycin sensitive 0.0193556
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0193166
NAV2 neuron navigator 2 0.0189578
ITGA1 integrin, alpha 1 0.0189204
GRB10 growth factor receptor-bound protein 10 0.0189144
CKAP2 cytoskeleton associated protein 2 0.0187779
CCL28 chemokine (C-C motif) ligand 28 0.018739
SDK1 sidekick cell adhesion molecule 1 0.0186649
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0185898
VKORC1 vitamin K epoxide reductase complex, subunit 1 0.0185815

decreased expression

Symbol Name Standardized Value
CXCL8 chemokine (C-X-C motif) ligand 8 -0.166881
FN1 fibronectin 1 -0.141336
CD44 CD44 molecule (Indian blood group) -0.121258
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.104657
NAMPT nicotinamide phosphoribosyltransferase -0.096629
MYH9 myosin, heavy chain 9, non-muscle -0.0924148
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0923223
POTEF POTE ankyrin domain family, member F -0.0895431
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0883336
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0817023
SOD2 superoxide dismutase 2, mitochondrial -0.0797453
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0785617
UBC ubiquitin C -0.0771399
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0729245
AHNAK AHNAK nucleoprotein -0.0618847
RAB7A RAB7A, member RAS oncogene family -0.0608428
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0588195
THBS1 thrombospondin 1 -0.0583158
ANKRD11 ankyrin repeat domain 11 -0.0578823
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0542214
EEF2 eukaryotic translation elongation factor 2 -0.0519596
TFPI2 tissue factor pathway inhibitor 2 -0.0495403
PPP1R15A protein phosphatase 1, regulatory subunit 15A -0.0490543
RPS27A ribosomal protein S27a -0.0485142
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0482282
GLS2 glutaminase 2 (liver, mitochondrial) -0.04815
CLIC4 chloride intracellular channel 4 -0.0474468
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0473712
YBX1 Y box binding protein 1 -0.0464005
ENO1 enolase 1, (alpha) -0.0463038
CUL3 cullin 3 -0.0450709
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0446216
H1-0 H1.0 linker histone -0.0426504
DST dystonin -0.0422024
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0421953
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0414889
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0413891
CCNL1 cyclin L1 -0.0413823
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0413247
PDLIM5 PDZ and LIM domain 5 -0.0409676
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0409226
DSCAM Down syndrome cell adhesion molecule -0.0404604
USP15 ubiquitin specific peptidase 15 -0.0391385
SMAD3 SMAD family member 3 -0.0390921
MCL1 myeloid cell leukemia 1 -0.0387125
RALY RALY heterogeneous nuclear ribonucleoprotein -0.03869
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0386328
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0386116
APP amyloid beta (A4) precursor protein -0.0382873
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0377955
SLIT2 slit homolog 2 (Drosophila) -0.0375681
ACTN4 actinin, alpha 4 -0.0373999
GLIS3 GLIS family zinc finger 3 -0.0373795
COL6A1 collagen, type VI, alpha 1 -0.0372249
EGR1 early growth response 1 -0.0370788
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0368301
IL1B interleukin 1, beta -0.0363418
TOP1 topoisomerase (DNA) I -0.0362225
EXT1 exostosin glycosyltransferase 1 -0.0350891
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0348624
VCL vinculin -0.0346947
ADAM17 ADAM metallopeptidase domain 17 -0.0345262
WDR43 WD repeat domain 43 -0.0342397
ASPH aspartate beta-hydroxylase -0.0339675
FLNA filamin A, alpha -0.0336305
MSN moesin -0.0334374
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0332371
RRBP1 ribosome binding protein 1 -0.0325263
ERBIN erbb2 interacting protein -0.0321528
SFPQ splicing factor proline/glutamine-rich -0.0318995
ZNF644 zinc finger protein 644 -0.0316309
BRD2 bromodomain containing 2 -0.0316089
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0315624
RPL4 ribosomal protein L4 -0.031245
BZW2 basic leucine zipper and W2 domains 2 -0.0311824
DOCK5 dedicator of cytokinesis 5 -0.0306793
CRY1 cryptochrome circadian clock 1 -0.0306348
TSC22D2 TSC22 domain family, member 2 -0.0301786
WNT5A wingless-type MMTV integration site family, member 5A -0.0301458
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0300532
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0298964
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0298574
LDHA lactate dehydrogenase A -0.0296556
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0293119
COL4A2 collagen, type IV, alpha 2 -0.0291733
B2M beta-2-microglobulin -0.0286621
IFRD1 interferon-related developmental regulator 1 -0.0284249
ZEB1 zinc finger E-box binding homeobox 1 -0.0283233
NCOA3 nuclear receptor coactivator 3 -0.0282745
SDC4 syndecan 4 -0.0281012
BHLHE40 basic helix-loop-helix family, member e40 -0.0280019
PUM2 pumilio RNA-binding family member 2 -0.0279578
PKM pyruvate kinase, muscle -0.0279352
FAM20C family with sequence similarity 20, member C -0.027892
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta -0.027683
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0275039
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0274997
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0273449
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0272793
LOC112694756 uncharaterized LOC112694756 -0.0269899