Carbidopa (monohydrate)_SW480 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbidopa (monohydrate) perturbation in SW480 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbidopa (monohydrate)_SW480 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.112385
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0824911
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0804214
ZNF292 zinc finger protein 292 0.0792588
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0675743
ESYT2 extended synaptotagmin-like protein 2 0.0656798
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0599573
KMT2E lysine (K)-specific methyltransferase 2E 0.0576118
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0559047
KIZ kizuna centrosomal protein 0.053613
PCBP2 poly(rC) binding protein 2 0.0529015
ANLN anillin, actin binding protein 0.0492302
UBA6 ubiquitin-like modifier activating enzyme 6 0.0485117
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0484045
PDGFA platelet-derived growth factor alpha polypeptide 0.046569
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0460175
TXNIP thioredoxin interacting protein 0.044506
CD46 CD46 molecule, complement regulatory protein 0.0439541
TNS4 tensin 4 0.0423779
AKAP9 A kinase (PRKA) anchor protein 9 0.0410855
NDRG1 N-myc downstream regulated 1 0.0409934
DIAPH3 diaphanous-related formin 3 0.0407708
OXR1 oxidation resistance 1 0.0397785
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0389602
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0388844
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0387902
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0370858
PGK1 phosphoglycerate kinase 1 0.0368521
SMC4 structural maintenance of chromosomes 4 0.0362926
XPO1 exportin 1 0.0359036
ABHD2 abhydrolase domain containing 2 0.0348355
AVL9 AVL9 homolog (S. cerevisiase) 0.0346
DDIT4 DNA-damage-inducible transcript 4 0.0343767
PCM1 pericentriolar material 1 0.0335025
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0333657
BIRC6 baculoviral IAP repeat containing 6 0.0331732
USP34 ubiquitin specific peptidase 34 0.0327497
CDK19 cyclin-dependent kinase 19 0.0324955
PHF21A PHD finger protein 21A 0.0324163
PTEN phosphatase and tensin homolog 0.0322641
KMT2C lysine (K)-specific methyltransferase 2C 0.0322588
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0320966
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0318249
NUP58 nucleoporin 58 0.0311146
CDK8 cyclin-dependent kinase 8 0.0310966
FNIP1 folliculin interacting protein 1 0.030166
ZNF638 zinc finger protein 638 0.0300845
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0294049
YEATS2 YEATS domain containing 2 0.0291577
GOLGA4 golgin A4 0.0290613
OGA O-GlcNAcase 0.0287773
KDM7A lysine (K)-specific demethylase 7A 0.0278466
PTBP3 polypyrimidine tract binding protein 3 0.0270652
ERRFI1 ERBB receptor feedback inhibitor 1 0.0269261
ADAM17 ADAM metallopeptidase domain 17 0.0268044
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0266205
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase 0.026219
MED13L mediator complex subunit 13-like 0.0261903
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0260047
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0258655
ETNK1 ethanolamine kinase 1 0.0258491
INSIG2 insulin induced gene 2 0.0256385
PDE8A phosphodiesterase 8A 0.0256094
SBF2 SET binding factor 2 0.0254897
HELZ helicase with zinc finger 0.0253986
RNMT RNA (guanine-7-) methyltransferase 0.0253586
SKIC3 SKI3 subunit of superkiller complex 0.0252869
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.025176
SETD5 SET domain containing 5 0.0247684
RNF24 ring finger protein 24 0.0246659
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0242865
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0242707
BRWD3 bromodomain and WD repeat domain containing 3 0.0241358
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma 0.0240413
N4BP2L2 NEDD4 binding protein 2-like 2 0.023795
PHIP pleckstrin homology domain interacting protein 0.0236294
NIPSNAP2 nipsnap homolog 2 0.0235674
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0235392
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.023053
MIS18BP1 MIS18 binding protein 1 0.0229891
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0228904
KTN1 kinectin 1 (kinesin receptor) 0.0228528
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0226099
COPA coatomer protein complex, subunit alpha 0.0224101
MSN moesin 0.0223602
CBX5 chromobox homolog 5 0.0221407
TPD52 tumor protein D52 0.0220159
USP33 ubiquitin specific peptidase 33 0.0219826
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 0.0219597
WASF2 WAS protein family, member 2 0.0219223
APOLD1 apolipoprotein L domain containing 1 0.0218958
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0218471
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0217233
DYNC2I1 dynein 2 intermediate chain 1 0.0216339
CDCP1 CUB domain containing protein 1 0.0216287
UGCG UDP-glucose ceramide glucosyltransferase 0.0214476
PKM pyruvate kinase, muscle 0.0213827
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0211002
ZMYM2 zinc finger, MYM-type 2 0.0210568
CEP57 centrosomal protein 57kDa 0.0210154

decreased expression

Symbol Name Standardized Value
NKD1 naked cuticle homolog 1 (Drosophila) -0.294368
TPT1 tumor protein, translationally-controlled 1 -0.111387
CDH13 cadherin 13 -0.0978099
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0947336
VCL vinculin -0.0875316
LMO7 LIM domain 7 -0.0825108
TMSB10 thymosin beta 10 -0.0793347
SPATA13 spermatogenesis associated 13 -0.0789994
ANXA2 annexin A2 -0.074637
CCND1 cyclin D1 -0.0742907
RPL35A ribosomal protein L35a -0.0740444
LOC102724023 ES1 protein homolog, mitochondrial -0.0738671
EZR ezrin -0.0735604
ACTG1 actin gamma 1 -0.0641385
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0577457
ACTN4 actinin, alpha 4 -0.056182
SYT1 synaptotagmin I -0.0551462
CDK6 cyclin-dependent kinase 6 -0.0543879
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0535506
GMDS GDP-mannose 4,6-dehydratase -0.0533026
INTS6 integrator complex subunit 6 -0.0524781
NCEH1 neutral cholesterol ester hydrolase 1 -0.0507931
RPLP1 ribosomal protein, large, P1 -0.0505547
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0493718
FRMD5 FERM domain containing 5 -0.0480774
TNS3 tensin 3 -0.0479191
FTL ferritin, light polypeptide -0.0477176
PDE4D phosphodiesterase 4D, cAMP-specific -0.0476907
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0468517
BCL2L1 BCL2-like 1 -0.0467987
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0464496
RPL23 ribosomal protein L23 -0.04565
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0442885
RPL26 ribosomal protein L26 -0.0431428
PTMA prothymosin, alpha -0.0426707
SQSTM1 sequestosome 1 -0.0422492
MTAP methylthioadenosine phosphorylase -0.0413477
DST dystonin -0.041076
RPS24 ribosomal protein S24 -0.0405382
SLC38A2 solute carrier family 38, member 2 -0.0402169
KRT18 keratin 18, type I -0.0386097
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.038332
RPS19 ribosomal protein S19 -0.0382595
RPS8 ribosomal protein S8 -0.037646
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0376052
IARS1 isoleucyl-tRNA synthetase 1 -0.0367068
GCLC glutamate-cysteine ligase, catalytic subunit -0.0364072
EGR1 early growth response 1 -0.0363699
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0363624
AHNAK AHNAK nucleoprotein -0.0360573
PLEC plectin -0.0353896
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0351791
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like -0.035143
RPL4 ribosomal protein L4 -0.0349163
RPL31 ribosomal protein L31 -0.0346886
RAB7A RAB7A, member RAS oncogene family -0.0342191
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.034172
COBL cordon-bleu WH2 repeat protein -0.0337576
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0335706
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0331033
RPL12 ribosomal protein L12 -0.0324619
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0322971
RPL38 ribosomal protein L38 -0.0321329
SMAD3 SMAD family member 3 -0.0317307
RPS27A ribosomal protein S27a -0.0313556
NOP56 NOP56 ribonucleoprotein -0.031205
SLC38A1 solute carrier family 38, member 1 -0.0308082
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0306151
HSPA8 heat shock 70kDa protein 8 -0.0303635
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0303599
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0301579
MYO1E myosin IE -0.0300741
TMEM163 transmembrane protein 163 -0.0299579
FUS FUS RNA binding protein -0.0297974
RPL13A ribosomal protein L13a -0.0294857
SMYD3 SET and MYND domain containing 3 -0.028977
XRN2 5'-3' exoribonuclease 2 -0.0288924
NPAS2 neuronal PAS domain protein 2 -0.0285941
EIF1 eukaryotic translation initiation factor 1 -0.0283861
EMP1 epithelial membrane protein 1 -0.0282398
LAMA4 laminin, alpha 4 -0.0277422
NAV2 neuron navigator 2 -0.02774
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0276975
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 -0.0276045
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0271276
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.027121
RUNX1 runt-related transcription factor 1 -0.0270974
RSL1D1 ribosomal L1 domain containing 1 -0.026334
IER3 immediate early response 3 -0.0263214
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0260934
RPL36A ribosomal protein L36a -0.0258587
WDR43 WD repeat domain 43 -0.0256965
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0255586
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like -0.0254913
IPO7 importin 7 -0.0254372
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.025314
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0249748
EFNB2 ephrin-B2 -0.0248379
RAD51B RAD51 paralog B -0.0247982
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0247038