Carbidopa (monohydrate)_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Carbidopa (monohydrate) perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Carbidopa (monohydrate)_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.161175
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.138332
NDRG1 N-myc downstream regulated 1 0.129559
HMGA2 high mobility group AT-hook 2 0.111111
HLA-B major histocompatibility complex, class I, B 0.104445
JARID2 jumonji, AT rich interactive domain 2 0.0919699
MMP12 matrix metallopeptidase 12 0.0791256
ARHGAP21 Rho GTPase activating protein 21 0.0739639
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0634095
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0629755
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0621086
TRIO trio Rho guanine nucleotide exchange factor 0.0610148
GREM1 gremlin 1, DAN family BMP antagonist 0.0596381
NAV2 neuron navigator 2 0.0591639
ELL2 elongation factor, RNA polymerase II, 2 0.0574653
NGLY1 N-glycanase 1 0.0548013
FAM13A family with sequence similarity 13, member A 0.0530081
FMNL2 formin-like 2 0.0529595
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0521304
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0513541
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0467437
TMEM165 transmembrane protein 165 0.0448338
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit 0.041896
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0408239
KIAA1217 KIAA1217 0.0398927
AFF3 AF4/FMR2 family, member 3 0.0396634
PTMA prothymosin, alpha 0.0390301
ANTXR2 anthrax toxin receptor 2 0.0386043
NBEAL1 neurobeachin-like 1 0.0384025
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0382036
CEMIP cell migration inducing protein, hyaluronan binding 0.0380796
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0377268
TTC3 tetratricopeptide repeat domain 3 0.0369514
DOCK5 dedicator of cytokinesis 5 0.0369171
FNIP1 folliculin interacting protein 1 0.035625
TMEM158 transmembrane protein 158 (gene/pseudogene) 0.0351577
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0341088
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0341056
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0339948
HDAC9 histone deacetylase 9 0.0336745
CA12 carbonic anhydrase XII 0.0333975
STC1 stanniocalcin 1 0.0332721
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.031792
VEGFA vascular endothelial growth factor A 0.0314678
RPS12 ribosomal protein S12 0.0314109
LRRC49 leucine rich repeat containing 49 0.031115
PRELID2 PRELI domain containing 2 0.0307491
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0299768
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0283015
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0279184
APOLD1 apolipoprotein L domain containing 1 0.0274912
MTSS1 metastasis suppressor 1 0.0274035
INTS6 integrator complex subunit 6 0.0272463
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.0269692
RPL26 ribosomal protein L26 0.0269515
RPS8 ribosomal protein S8 0.0268835
SPAG9 sperm associated antigen 9 0.0265555
FGFR1 fibroblast growth factor receptor 1 0.0258368
IGF2 insulin-like growth factor 2 0.0257546
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0254436
WSB1 WD repeat and SOCS box containing 1 0.0247998
ANKRD12 ankyrin repeat domain 12 0.0247161
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0245896
TNS1 tensin 1 0.024406
PTPRM protein tyrosine phosphatase, receptor type, M 0.0243469
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0237537
KDM4C lysine (K)-specific demethylase 4C 0.0237009
INSIG1 insulin induced gene 1 0.0236309
LTBP1 latent transforming growth factor beta binding protein 1 0.0234119
AMPD3 adenosine monophosphate deaminase 3 0.0232638
AKAP9 A kinase (PRKA) anchor protein 9 0.023177
HIPK2 homeodomain interacting protein kinase 2 0.0230457
ZBTB20 zinc finger and BTB domain containing 20 0.022761
MRC2 mannose receptor, C type 2 0.0227349
RAD51B RAD51 paralog B 0.0225029
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.022482
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0221214
COL8A1 collagen, type VIII, alpha 1 0.0220955
ESYT2 extended synaptotagmin-like protein 2 0.0220909
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0220162
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0218679
STC2 stanniocalcin 2 0.0215271
CALR calreticulin 0.0212032
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0211695
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0209712
AEBP2 AE binding protein 2 0.0209582
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.020749
SNX14 sorting nexin 14 0.0206653
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0205815
ATXN1 ataxin 1 0.0204261
MARCHF3 membrane associated ring-CH-type finger 3 0.0201073
N4BP2L2 NEDD4 binding protein 2-like 2 0.0200597
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.019835
BBX bobby sox homolog (Drosophila) 0.0198197
PCDH7 protocadherin 7 0.0197855
DOT1L DOT1-like histone H3K79 methyltransferase 0.0196507
SUCO SUN domain containing ossification factor 0.0196477
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0195987
YEATS2 YEATS domain containing 2 0.0195124
ZNF638 zinc finger protein 638 0.0194777

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.265806
COL6A3 collagen, type VI, alpha 3 -0.193819
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.166606
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.142359
INHBA inhibin, beta A -0.121564
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0900895
MYO10 myosin X -0.0883843
EMP1 epithelial membrane protein 1 -0.0855082
CALD1 caldesmon 1 -0.0739368
FTL ferritin, light polypeptide -0.0730637
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.071009
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0692245
NALF1 NALCN channel auxiliary factor 1 -0.0666814
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0654316
COL1A2 collagen, type I, alpha 2 -0.0624882
LOC112694756 uncharaterized LOC112694756 -0.060196
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0555566
MMP1 matrix metallopeptidase 1 -0.0528709
CAV1 caveolin 1, caveolae protein, 22kDa -0.0498936
SEPTIN11 septin 11 -0.0497782
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0473562
MAP1B microtubule-associated protein 1B -0.046345
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.046312
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0450767
PFN1 profilin 1 -0.0444515
COL5A3 collagen, type V, alpha 3 -0.0426972
FTH1 ferritin, heavy polypeptide 1 -0.0423914
EEF2 eukaryotic translation elongation factor 2 -0.0421578
CALU calumenin -0.0402007
TMSB10 thymosin beta 10 -0.0393853
CLTC clathrin, heavy chain (Hc) -0.0386269
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0384958
EGFR epidermal growth factor receptor -0.03793
TPI1 triosephosphate isomerase 1 -0.0370478
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0370371
LDHA lactate dehydrogenase A -0.0361079
CD44 CD44 molecule (Indian blood group) -0.0348189
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0337466
SLIT2 slit homolog 2 (Drosophila) -0.0332183
RPLP1 ribosomal protein, large, P1 -0.0324709
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0321981
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0318694
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0317733
COL4A1 collagen, type IV, alpha 1 -0.0306666
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0304781
PCBP2 poly(rC) binding protein 2 -0.0301732
CCDC102B coiled-coil domain containing 102B -0.0300498
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0299237
CD59 CD59 molecule, complement regulatory protein -0.0299048
AKAP12 A kinase (PRKA) anchor protein 12 -0.0297793
PDGFRB platelet-derived growth factor receptor, beta polypeptide -0.02827
ACBD3 acyl-CoA binding domain containing 3 -0.0279203
ADGRB3 adhesion G protein-coupled receptor B3 -0.0275322
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.027403
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0273787
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0272406
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0263569
CHSY1 chondroitin sulfate synthase 1 -0.0262541
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0258035
VIM vimentin -0.0257402
PKM pyruvate kinase, muscle -0.0254014
COPB1 coatomer protein complex, subunit beta 1 -0.0253754
COL4A2 collagen, type IV, alpha 2 -0.0253388
ARHGAP24 Rho GTPase activating protein 24 -0.0249369
BAZ1A bromodomain adjacent to zinc finger domain, 1A -0.0248554
MT2A metallothionein 2A -0.0248168
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0245132
VDAC1 voltage-dependent anion channel 1 -0.024433
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.024382
EGR1 early growth response 1 -0.0243654
VCL vinculin -0.0239671
RAB7A RAB7A, member RAS oncogene family -0.0239343
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0235146
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0232078
DLG1 discs, large homolog 1 (Drosophila) -0.0231631
ETV3 ets variant 3 -0.0229669
CLIC4 chloride intracellular channel 4 -0.0228975
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0228151
SRPK2 SRSF protein kinase 2 -0.0227396
JAK1 Janus kinase 1 -0.0226991
S100A6 S100 calcium binding protein A6 -0.0226422
JMJD1C jumonji domain containing 1C -0.0224757
ZNF644 zinc finger protein 644 -0.022442
RAB10 RAB10, member RAS oncogene family -0.022334
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0222634
FAT1 FAT atypical cadherin 1 -0.0221027
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0220934
PLPP3 phospholipid phosphatase 3 -0.0220562
NEK7 NIMA-related kinase 7 -0.021908
OXR1 oxidation resistance 1 -0.0218125
RAI14 retinoic acid induced 14 -0.0216424
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 -0.0216027
AHNAK AHNAK nucleoprotein -0.0215478
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0213226
GRB2 growth factor receptor-bound protein 2 -0.0212742
CDK6 cyclin-dependent kinase 6 -0.021248
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0211698
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0211515
POTEF POTE ankyrin domain family, member F -0.0211502
NPTN neuroplastin -0.0210907