Cepharanthine_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cepharanthine perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cepharanthine_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.298723
AKAP12 A kinase (PRKA) anchor protein 12 0.180388
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.174185
SAMD4A sterile alpha motif domain containing 4A 0.147275
SVIL supervillin 0.12804
SPTBN1 spectrin, beta, non-erythrocytic 1 0.125309
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.109329
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0854716
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.082216
MT2A metallothionein 2A 0.0771496
TNS1 tensin 1 0.0752124
VEGFA vascular endothelial growth factor A 0.0709662
PEG3 paternally expressed 3 0.0663596
FTH1 ferritin, heavy polypeptide 1 0.0597793
MACF1 microtubule-actin crosslinking factor 1 0.0597565
NDRG1 N-myc downstream regulated 1 0.0594072
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0587579
SDC4 syndecan 4 0.0565639
MYH9 myosin, heavy chain 9, non-muscle 0.0558774
GRB10 growth factor receptor-bound protein 10 0.0526998
DSPP dentin sialophosphoprotein 0.0526056
IGFBP1 insulin-like growth factor binding protein 1 0.0522727
SMAD3 SMAD family member 3 0.0504501
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0499775
EEF2 eukaryotic translation elongation factor 2 0.0491001
FAM107B family with sequence similarity 107, member B 0.0475684
ATXN1 ataxin 1 0.0455919
DSCAM Down syndrome cell adhesion molecule 0.0449196
NFE2L1 nuclear factor, erythroid 2-like 1 0.0431106
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0429473
KIAA1217 KIAA1217 0.0425537
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.042063
ASPH aspartate beta-hydroxylase 0.0415072
FOXP1 forkhead box P1 0.0410806
BCL2L1 BCL2-like 1 0.0408034
COL7A1 collagen, type VII, alpha 1 0.0380646
HOOK2 hook microtubule-tethering protein 2 0.0377695
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0377339
ITGB5 integrin, beta 5 0.0370806
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0370647
EIF4B eukaryotic translation initiation factor 4B 0.0363483
KYNU kynureninase 0.0360909
VCL vinculin 0.0359495
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0354578
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0352716
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0351886
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.0348973
ERRFI1 ERBB receptor feedback inhibitor 1 0.0346764
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0343629
FLNA filamin A, alpha 0.0339207
DIAPH1 diaphanous-related formin 1 0.0338446
ALPK2 alpha-kinase 2 0.0336161
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.0334841
ITGAV integrin, alpha V 0.0334734
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0325076
EPAS1 endothelial PAS domain protein 1 0.0324816
CTNND1 catenin (cadherin-associated protein), delta 1 0.0319224
FAT1 FAT atypical cadherin 1 0.0318453
FRMD5 FERM domain containing 5 0.031582
PAWR PRKC, apoptosis, WT1, regulator 0.0313794
ACTG1 actin gamma 1 0.0310807
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0306628
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0306114
DOCK5 dedicator of cytokinesis 5 0.030587
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0302868
DST dystonin 0.0297876
PMM2 phosphomannomutase 2 0.0293757
RUNX1 runt-related transcription factor 1 0.0292769
PLEC plectin 0.0292267
CTSB cathepsin B 0.0282642
CSNK1A1 casein kinase 1, alpha 1 0.0282444
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0280152
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0277939
JAG1 jagged 1 0.0271543
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0267747
FHL2 four and a half LIM domains 2 0.0264485
FLNB filamin B, beta 0.0262176
CLTB clathrin, light chain B 0.0255846
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0255569
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0252985
SRRM2 serine/arginine repetitive matrix 2 0.0252244
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0252057
MYO5B myosin VB 0.0251589
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0246664
STC2 stanniocalcin 2 0.0245852
SHB Src homology 2 domain containing adaptor protein B 0.0241299
PPARD peroxisome proliferator-activated receptor delta 0.0238421
FAM13A family with sequence similarity 13, member A 0.0238394
RPL3 ribosomal protein L3 0.023791
GSE1 Gse1 coiled-coil protein 0.023608
BHLHE40 basic helix-loop-helix family, member e40 0.0232592
SPIRE1 spire-type actin nucleation factor 1 0.0231442
RAD51B RAD51 paralog B 0.0230905
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0226984
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.022348
GCLC glutamate-cysteine ligase, catalytic subunit 0.0223214
EXT1 exostosin glycosyltransferase 1 0.0221641
NABP1 nucleic acid binding protein 1 0.0220659
TBC1D22A TBC1 domain family, member 22A 0.0220274
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0220086

decreased expression

Symbol Name Standardized Value
APOB apolipoprotein B -0.146356
APOA2 apolipoprotein A-II -0.134832
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.104982
GPC3 glypican 3 -0.102253
RPS6 ribosomal protein S6 -0.10016
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.095146
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0938956
TPT1 tumor protein, translationally-controlled 1 -0.0813313
EML4 echinoderm microtubule associated protein like 4 -0.0807387
FBF1 Fas (TNFRSF6) binding factor 1 -0.0802398
CP ceruloplasmin (ferroxidase) -0.0774515
A2M alpha-2-macroglobulin -0.0772465
FNDC3B fibronectin type III domain containing 3B -0.0716161
RPL11 ribosomal protein L11 -0.0714828
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0686164
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0677531
RPS8 ribosomal protein S8 -0.0676086
EHBP1 EH domain binding protein 1 -0.0670922
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0655955
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0612858
RPS24 ribosomal protein S24 -0.0606698
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0605313
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0594956
FTL ferritin, light polypeptide -0.0575928
RPL34 ribosomal protein L34 -0.0552512
LYZ lysozyme -0.0529615
TM4SF1 transmembrane 4 L six family member 1 -0.0521895
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0513688
TRIM26 tripartite motif containing 26 -0.0509261
RPLP2 ribosomal protein, large, P2 -0.0485588
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0472078
C3 complement component 3 -0.0460368
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0457638
RPL35A ribosomal protein L35a -0.0457173
TMEM123 transmembrane protein 123 -0.0449471
RPLP1 ribosomal protein, large, P1 -0.0445379
SESTD1 SEC14 and spectrin domains 1 -0.0431655
RPS13 ribosomal protein S13 -0.0431457
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0426076
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0422227
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0414917
PTCHD4 patched domain containing 4 -0.0414686
RPS27A ribosomal protein S27a -0.0413588
PTMA prothymosin, alpha -0.0404823
PTPRM protein tyrosine phosphatase, receptor type, M -0.0402018
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0393978
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.038887
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0384658
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0381013
SELENOP selenoprotein P -0.0381012
RPL37A ribosomal protein L37a -0.0374678
RPL31 ribosomal protein L31 -0.0370737
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0365157
PARD3 par-3 family cell polarity regulator -0.0359144
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0356227
RPS23 ribosomal protein S23 -0.0353888
NPAS2 neuronal PAS domain protein 2 -0.0353242
PERP PERP, TP53 apoptosis effector -0.0348238
AMBP alpha-1-microglobulin/bikunin precursor -0.0347918
RACK1 receptor for activated C kinase 1 -0.034686
RPS25 ribosomal protein S25 -0.0346086
ISG15 ISG15 ubiquitin-like modifier -0.0341939
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0334818
NPR2 natriuretic peptide receptor 2 -0.0332322
MATN3 matrilin 3 -0.0331687
SOX5 SRY (sex determining region Y)-box 5 -0.0326688
ARL5A ADP-ribosylation factor-like 5A -0.0326172
CST3 cystatin C -0.0325885
KPNB1 karyopherin (importin) beta 1 -0.0322862
RPS12 ribosomal protein S12 -0.0322433
GNAS GNAS complex locus -0.0322233
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0320403
SOD2 superoxide dismutase 2, mitochondrial -0.0319074
MAML2 mastermind-like 2 (Drosophila) -0.0314618
APOE apolipoprotein E -0.0314266
RPL27A ribosomal protein L27a -0.0308144
RPL5 ribosomal protein L5 -0.0303189
GMDS GDP-mannose 4,6-dehydratase -0.0299668
NRIP1 nuclear receptor interacting protein 1 -0.0298621
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0296057
RPS29 ribosomal protein S29 -0.0291136
APOC1 apolipoprotein C-I -0.027751
RPL30 ribosomal protein L30 -0.0275996
IER3 immediate early response 3 -0.027397
PDIA3 protein disulfide isomerase family A, member 3 -0.0272409
ENO1 enolase 1, (alpha) -0.0272346
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0271991
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0269463
RPL36A ribosomal protein L36a -0.0269145
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0268419
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0265641
GCC2 GRIP and coiled-coil domain containing 2 -0.0264293
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0263932
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.0260584
PDE4D phosphodiesterase 4D, cAMP-specific -0.0260091
AHSG alpha-2-HS-glycoprotein -0.0259488
RPL26 ribosomal protein L26 -0.025612
DOK6 docking protein 6 -0.0254662
BIRC6 baculoviral IAP repeat containing 6 -0.0254399
CCL20 chemokine (C-C motif) ligand 20 -0.0253582