Cepharanthine_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cepharanthine perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cepharanthine_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.186684
FTH1 ferritin, heavy polypeptide 1 0.135139
EZR ezrin 0.114428
TMSB4X thymosin beta 4, X-linked 0.11199
CAPRIN2 caprin family member 2 0.0998715
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0824472
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0782286
TXNRD1 thioredoxin reductase 1 0.0656273
KMT2E lysine (K)-specific methyltransferase 2E 0.0534047
EEF2 eukaryotic translation elongation factor 2 0.0482305
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0461783
SRRM2 serine/arginine repetitive matrix 2 0.0452601
HOOK2 hook microtubule-tethering protein 2 0.0451532
YBX3 Y box binding protein 3 0.0433573
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0430613
RTN4 reticulon 4 0.0420723
EMP1 epithelial membrane protein 1 0.0420156
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0406552
RUNX1 runt-related transcription factor 1 0.0393356
MT1X metallothionein 1X 0.0386561
JUN jun proto-oncogene 0.0370797
ANGPTL4 angiopoietin-like 4 0.0363446
CALR calreticulin 0.0362676
RAI1 retinoic acid induced 1 0.0350803
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0347101
PLEC plectin 0.0340836
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0338996
WSB1 WD repeat and SOCS box containing 1 0.0337465
FMNL2 formin-like 2 0.0337427
BCAR3 breast cancer anti-estrogen resistance 3 0.0337078
TMEM41B transmembrane protein 41B 0.033551
BIRC3 baculoviral IAP repeat containing 3 0.033392
SPAG9 sperm associated antigen 9 0.0332665
WWTR1 WW domain containing transcription regulator 1 0.0328007
DSCAM Down syndrome cell adhesion molecule 0.0324782
FOSL1 FOS-like antigen 1 0.0321924
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0317397
CSNK1A1 casein kinase 1, alpha 1 0.0314701
CCNL1 cyclin L1 0.03078
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.030701
MYH9 myosin, heavy chain 9, non-muscle 0.0305151
CEP250 centrosomal protein 250kDa 0.0303774
SDC4 syndecan 4 0.0293942
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0288222
PLAU plasminogen activator, urokinase 0.0287135
AREG amphiregulin 0.0285683
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0281025
DENND5A DENN/MADD domain containing 5A 0.028092
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0276966
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0272117
RBM25 RNA binding motif protein 25 0.027196
TPR translocated promoter region, nuclear basket protein 0.0271445
SYAP1 synapse associated protein 1 0.0269257
ERBIN erbb2 interacting protein 0.0269201
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 0.0266455
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.02637
NPAS2 neuronal PAS domain protein 2 0.0263543
KLF6 Kruppel-like factor 6 0.0261476
DARS1 aspartyl-tRNA synthetase 1 0.0260266
SFPQ splicing factor proline/glutamine-rich 0.0259738
OGA O-GlcNAcase 0.0257753
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0257098
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0250493
FLNB filamin B, beta 0.0249665
ANKRD36 ankyrin repeat domain 36 0.0249116
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0247767
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.0245218
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.024435
DDIT4 DNA-damage-inducible transcript 4 0.0243168
SMC4 structural maintenance of chromosomes 4 0.0242288
TPM3 tropomyosin 3 0.0241551
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0237693
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0236724
BRD4 bromodomain containing 4 0.0234873
PDE4D phosphodiesterase 4D, cAMP-specific 0.0234403
THRAP3 thyroid hormone receptor associated protein 3 0.0234265
RTTN rotatin 0.023344
ADM adrenomedullin 0.0232029
MYH10 myosin, heavy chain 10, non-muscle 0.0231288
AMPD3 adenosine monophosphate deaminase 3 0.0231222
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0230389
SETD5 SET domain containing 5 0.0223737
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0222605
PRRC2C proline-rich coiled-coil 2C 0.0222166
APLP2 amyloid beta (A4) precursor-like protein 2 0.021949
RNF213 ring finger protein 213 0.0218305
SEC24A SEC24 family member A 0.0217953
DIAPH1 diaphanous-related formin 1 0.0217708
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0217186
COL6A3 collagen, type VI, alpha 3 0.0215425
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0213813
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0212116
ACTG1 actin gamma 1 0.0210125
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0208992
CEP192 centrosomal protein 192kDa 0.0208817
PHF21A PHD finger protein 21A 0.0208174
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0207036
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0206654
PTMA prothymosin, alpha 0.0206456
NCAPD2 non-SMC condensin I complex, subunit D2 0.0205073

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.205062
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.166903
TP63 tumor protein p63 -0.14301
CD44 CD44 molecule (Indian blood group) -0.135779
VIM vimentin -0.116146
EHBP1 EH domain binding protein 1 -0.0996312
DLG1 discs, large homolog 1 (Drosophila) -0.0991069
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0855469
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0829873
CADM2 cell adhesion molecule 2 -0.0825627
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0801419
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0787937
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0714463
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0704196
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0674104
EPHA4 EPH receptor A4 -0.0666793
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0661984
EFNA5 ephrin-A5 -0.0661569
TNS3 tensin 3 -0.063793
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.063318
CSMD3 CUB and Sushi multiple domains 3 -0.0584569
RPS8 ribosomal protein S8 -0.0575431
EGFR epidermal growth factor receptor -0.0556812
CFAP299 cilia and flagella associated protein 299 -0.0545028
DST dystonin -0.0537343
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0533855
AEBP2 AE binding protein 2 -0.0476481
RPS24 ribosomal protein S24 -0.0475524
CANX calnexin -0.0433369
TPT1 tumor protein, translationally-controlled 1 -0.0426467
RPS6 ribosomal protein S6 -0.0419838
FTL ferritin, light polypeptide -0.0418719
RPL31 ribosomal protein L31 -0.0418205
NEK10 NIMA-related kinase 10 -0.0415017
SOD2 superoxide dismutase 2, mitochondrial -0.0410176
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0401051
TSC22D1 TSC22 domain family, member 1 -0.0397701
RPL35A ribosomal protein L35a -0.0397299
LDHA lactate dehydrogenase A -0.0393208
SDK1 sidekick cell adhesion molecule 1 -0.0375256
IFIH1 interferon induced with helicase C domain 1 -0.037476
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0366201
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0364653
PLSCR1 phospholipid scramblase 1 -0.0362655
MYOF myoferlin -0.036173
RIGI RNA sensor RIG-I -0.0351976
RPS27A ribosomal protein S27a -0.0343821
STK17A serine/threonine kinase 17a -0.0342644
INTS6 integrator complex subunit 6 -0.034079
RPS25 ribosomal protein S25 -0.0335544
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0334467
RPLP0 ribosomal protein, large, P0 -0.0330032
TMEM123 transmembrane protein 123 -0.032934
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0327482
RPL27A ribosomal protein L27a -0.0326756
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0325006
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0321812
RPL34 ribosomal protein L34 -0.0320811
RPL26 ribosomal protein L26 -0.0320039
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0317473
DOCK11 dedicator of cytokinesis 11 -0.0309639
RACK1 receptor for activated C kinase 1 -0.0304391
MAP4 microtubule-associated protein 4 -0.0304292
RPS13 ribosomal protein S13 -0.0302051
TAS2R14 taste receptor, type 2, member 14 -0.0291695
HMGA1 high mobility group AT-hook 1 -0.0291402
RPS23 ribosomal protein S23 -0.029054
HDAC9 histone deacetylase 9 -0.0285223
RPL37 ribosomal protein L37 -0.0283319
LPP LIM domain containing preferred translocation partner in lipoma -0.0277428
FNDC3B fibronectin type III domain containing 3B -0.0276642
VCL vinculin -0.0275781
STXBP5 syntaxin binding protein 5 (tomosyn) -0.027575
SPDYA speedy/RINGO cell cycle regulator family member A -0.0275363
DENND1A DENN/MADD domain containing 1A -0.0267363
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0265528
CLIP2 CAP-GLY domain containing linker protein 2 -0.0265488
SP100 SP100 nuclear antigen -0.0264261
BABAM2 BRISC and BRCA1 A complex member 2 -0.0262863
LRRC49 leucine rich repeat containing 49 -0.0262774
RPS20 ribosomal protein S20 -0.0261853
MBD5 methyl-CpG binding domain protein 5 -0.026094
PSD3 pleckstrin and Sec7 domain containing 3 -0.0260859
SLC39A10 solute carrier family 39 (zinc transporter), member 10 -0.02535
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0253422
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0253087
VDAC1 voltage-dependent anion channel 1 -0.0245595
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0245497
PATJ PATJ crumbs cell polarity complex component -0.0244975
EPB41 erythrocyte membrane protein band 4.1 -0.02432
OSMR oncostatin M receptor -0.0242279
RPL9 ribosomal protein L9 -0.0241816
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0241067
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0239239
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0237682
HLA-E major histocompatibility complex, class I, E -0.0237402
RPS28 ribosomal protein S28 -0.0236781
DNER delta/notch-like EGF repeat containing -0.0234974
KDM4B lysine (K)-specific demethylase 4B -0.023474
RPLP1 ribosomal protein, large, P1 -0.0234314