Cepharanthine_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cepharanthine perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cepharanthine_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NTM neurotrimin 0.103417
PCLO piccolo presynaptic cytomatrix protein 0.0978306
CALR calreticulin 0.0970424
SAMD4A sterile alpha motif domain containing 4A 0.0933833
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0868379
DST dystonin 0.0842906
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0767876
SRRM2 serine/arginine repetitive matrix 2 0.0739198
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0633304
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0633001
EEF2 eukaryotic translation elongation factor 2 0.0583627
DOCK5 dedicator of cytokinesis 5 0.0561467
MACF1 microtubule-actin crosslinking factor 1 0.055792
COL3A1 collagen, type III, alpha 1 0.0549829
MYH9 myosin, heavy chain 9, non-muscle 0.0537487
ANKRD12 ankyrin repeat domain 12 0.0533545
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0533071
NEBL nebulette 0.0522082
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0515715
PARD3B par-3 family cell polarity regulator beta 0.0494794
DSCAM Down syndrome cell adhesion molecule 0.0489046
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0468139
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0463547
PCDH18 protocadherin 18 0.0462719
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0460741
TTC28 tetratricopeptide repeat domain 28 0.0452365
SFTPA2 surfactant protein A2 0.0449406
TMSB4X thymosin beta 4, X-linked 0.044705
FOXP2 forkhead box P2 0.0442454
GSE1 Gse1 coiled-coil protein 0.0441573
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0441142
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0440662
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0423243
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0413737
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 0.0407533
TMED9 transmembrane emp24 protein transport domain containing 9 0.0403079
VEGFA vascular endothelial growth factor A 0.0401025
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0398309
HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 0.0397155
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0386563
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0385857
MED12L mediator complex subunit 12-like 0.0381965
ARID1A AT rich interactive domain 1A (SWI-like) 0.0367703
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0359082
NOTCH2 notch 2 0.0358926
TENM3 teneurin transmembrane protein 3 0.0357737
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0356157
CCN2 cellular communication network factor 2 0.0351167
EEF1G eukaryotic translation elongation factor 1 gamma 0.034784
CLSTN1 calsyntenin 1 0.0344948
MEIS2 Meis homeobox 2 0.0344447
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0343519
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0340587
FOXN3 forkhead box N3 0.0339639
WSB1 WD repeat and SOCS box containing 1 0.0338834
PLD3 phospholipase D family, member 3 0.0337776
NPAS3 neuronal PAS domain protein 3 0.0333471
STMN1 stathmin 1 0.0331797
SMYD3 SET and MYND domain containing 3 0.0325485
DOCK1 dedicator of cytokinesis 1 0.0325188
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0322423
B2M beta-2-microglobulin 0.0321144
RPL7A ribosomal protein L7a 0.0318309
OSBPL10 oxysterol binding protein-like 10 0.0312553
PHF3 PHD finger protein 3 0.030772
PDIA4 protein disulfide isomerase family A, member 4 0.0300184
NCOR2 nuclear receptor corepressor 2 0.0298272
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0298256
ACTG1 actin gamma 1 0.0292597
EIF4H eukaryotic translation initiation factor 4H 0.029255
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.029026
RPL3 ribosomal protein L3 0.0289081
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0288979
PTMA prothymosin, alpha 0.0287769
CCNYL1 cyclin Y-like 1 0.028346
FAM168A family with sequence similarity 168, member A 0.0280222
INTS6 integrator complex subunit 6 0.0280043
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0278672
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0277497
SVIL supervillin 0.0275329
MGA MGA, MAX dimerization protein 0.0274555
ECT2 epithelial cell transforming 2 0.0273275
ANKRD11 ankyrin repeat domain 11 0.0271107
FOXK1 forkhead box K1 0.0270439
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0269518
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.02683
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0265251
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0265172
EXOC6B exocyst complex component 6B 0.0264575
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0262611
ALKBH5 AlkB family member 5, RNA demethylase 0.0262415
MEF2A myocyte enhancer factor 2A 0.0261544
MSH2 mutS homolog 2 0.026123
ZNF516 zinc finger protein 516 0.0261115
SCFD1 sec1 family domain containing 1 0.0260967
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.0260497
CSNK1D casein kinase 1, delta 0.0260399
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 0.0258269
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0258044
TMSB10 thymosin beta 10 0.0257473

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.121538
GPC3 glypican 3 -0.105416
PGAP1 post-GPI attachment to proteins 1 -0.102665
ZNF292 zinc finger protein 292 -0.0837595
COL11A1 collagen, type XI, alpha 1 -0.0817233
TSC22D2 TSC22 domain family, member 2 -0.0801011
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0782761
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.072741
VIM vimentin -0.0705487
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0703646
QKI QKI, KH domain containing, RNA binding -0.0680553
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0626551
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0620798
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0584541
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0581046
LRRC4C leucine rich repeat containing 4C -0.0569581
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.056475
RBM39 RNA binding motif protein 39 -0.0542025
MRPS30 mitochondrial ribosomal protein S30 -0.0533255
NCAM2 neural cell adhesion molecule 2 -0.052252
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0491847
PHIP pleckstrin homology domain interacting protein -0.0475258
MARCHF6 membrane associated ring-CH-type finger 6 -0.0472336
USP3 ubiquitin specific peptidase 3 -0.0468296
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0465933
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0455078
RPS16 ribosomal protein S16 -0.0453467
VGLL3 vestigial-like family member 3 -0.0450508
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.042093
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0408163
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0401774
LDHA lactate dehydrogenase A -0.0401638
ZEB2 zinc finger E-box binding homeobox 2 -0.0400798
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0400302
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0398438
ADGRL2 adhesion G protein-coupled receptor L2 -0.0397616
ARHGAP21 Rho GTPase activating protein 21 -0.0394865
UBE2K ubiquitin-conjugating enzyme E2K -0.0383932
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0375467
RPS27A ribosomal protein S27a -0.0373005
PICALM phosphatidylinositol binding clathrin assembly protein -0.0372749
PFN1 profilin 1 -0.0371946
LHFPL6 LHFPL tetraspan subfamily member 6 -0.0369854
SHROOM3 shroom family member 3 -0.036526
PDIA3 protein disulfide isomerase family A, member 3 -0.0363284
UBE2G1 ubiquitin-conjugating enzyme E2G 1 -0.0358486
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0354707
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0351005
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0348432
MYL12B myosin, light chain 12B, regulatory -0.0347885
HMGB1 high mobility group box 1 -0.0346777
CBX3 chromobox homolog 3 -0.0346685
CDC73 cell division cycle 73 -0.0344948
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0343179
ZC3H15 zinc finger CCCH-type containing 15 -0.0339821
RHEB Ras homolog enriched in brain -0.0338155
IARS1 isoleucyl-tRNA synthetase 1 -0.0334216
PARD3 par-3 family cell polarity regulator -0.0334143
PNISR PNN-interacting serine/arginine-rich protein -0.0333736
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0329902
ITGAV integrin, alpha V -0.0328781
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.032805
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0327351
TCEA1 transcription elongation factor A (SII), 1 -0.0326781
HBP1 HMG-box transcription factor 1 -0.032468
LRRN3 leucine rich repeat neuronal 3 -0.0324458
RPL7 ribosomal protein L7 -0.0324267
SEC63 SEC63 homolog (S. cerevisiae) -0.0319431
MAP4 microtubule-associated protein 4 -0.0319021
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0316037
ZNF644 zinc finger protein 644 -0.0315022
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) -0.031139
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0309009
SLC44A5 solute carrier family 44, member 5 -0.0308169
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0307294
AZIN1 antizyme inhibitor 1 -0.0306199
RPS2 ribosomal protein S2 -0.030491
MB21D2 Mab-21 domain containing 2 -0.0303179
CHD1 chromodomain helicase DNA binding protein 1 -0.0301548
NOP58 NOP58 ribonucleoprotein -0.0298076
SFRP4 secreted frizzled-related protein 4 -0.0296779
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.029642
RPS6 ribosomal protein S6 -0.0296149
USP25 ubiquitin specific peptidase 25 -0.0295628
ATP5F1B ATP synthase F1 subunit beta -0.029487
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit -0.0293908
SERBP1 SERPINE1 mRNA binding protein 1 -0.0293487
MTF2 metal response element binding transcription factor 2 -0.0292956
FUBP1 far upstream element (FUSE) binding protein 1 -0.0291331
PPP4R1 protein phosphatase 4, regulatory subunit 1 -0.0288752
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0288178
DOCK7 dedicator of cytokinesis 7 -0.028778
OLA1 Obg-like ATPase 1 -0.0286158
CSDE1 cold shock domain containing E1, RNA-binding -0.0285103
CALCR calcitonin receptor -0.0285093
BMPR1A bone morphogenetic protein receptor, type IA -0.0284586
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0284028
NAMPT nicotinamide phosphoribosyltransferase -0.0283432
RFX7 regulatory factor X, 7 -0.0282895
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0282831