Ciclopirox_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ciclopirox perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ciclopirox_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.192146
PLAT plasminogen activator, tissue 0.184737
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.144207
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.142824
CD44 CD44 molecule (Indian blood group) 0.103815
PODXL podocalyxin-like 0.102066
LOX lysyl oxidase 0.0745961
GLIS3 GLIS family zinc finger 3 0.0637289
B2M beta-2-microglobulin 0.0607714
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0595995
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0571913
SEPTIN9 septin 9 0.054768
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0527072
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0509277
NAV1 neuron navigator 1 0.0465116
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0448172
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0441198
MB21D2 Mab-21 domain containing 2 0.0429986
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0424472
FNDC3B fibronectin type III domain containing 3B 0.0419447
EFNA5 ephrin-A5 0.0412413
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0406647
CD59 CD59 molecule, complement regulatory protein 0.040233
PRSS23 protease, serine, 23 0.040177
MCL1 myeloid cell leukemia 1 0.0396915
S100A10 S100 calcium binding protein A10 0.0383517
RRM2 ribonucleotide reductase M2 0.03749
DOCK5 dedicator of cytokinesis 5 0.0365419
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.0360653
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0353935
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0353546
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0351668
NEK7 NIMA-related kinase 7 0.0342598
ERBIN erbb2 interacting protein 0.0340176
MED13L mediator complex subunit 13-like 0.0337305
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0315259
NAP1L1 nucleosome assembly protein 1-like 1 0.031463
PRRC2C proline-rich coiled-coil 2C 0.0312686
TPT1 tumor protein, translationally-controlled 1 0.0310966
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0304147
H3-3B H3.3 histone B 0.0302206
CSNK1A1 casein kinase 1, alpha 1 0.0301175
MT1X metallothionein 1X 0.0300512
DCAF6 DDB1 and CUL4 associated factor 6 0.0299021
ATP13A3 ATPase type 13A3 0.0296892
ASPH aspartate beta-hydroxylase 0.0296551
CDK6 cyclin-dependent kinase 6 0.0292063
SLC22A23 solute carrier family 22, member 23 0.0290447
ATL3 atlastin GTPase 3 0.0286756
DNMBP dynamin binding protein 0.028028
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.027936
SP3 Sp3 transcription factor 0.0275264
LMNA lamin A/C 0.0272592
ZFAND3 zinc finger, AN1-type domain 3 0.0272288
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0268377
WWTR1 WW domain containing transcription regulator 1 0.0266632
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0264447
TUBB4B tubulin, beta 4B class IVb 0.0264067
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.0263216
MSN moesin 0.0262018
RNF144A ring finger protein 144A 0.0255404
SMC4 structural maintenance of chromosomes 4 0.025526
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0250432
CELF1 CUGBP, Elav-like family member 1 0.0248576
FSTL1 follistatin-like 1 0.0246609
TENM3 teneurin transmembrane protein 3 0.0245264
MPRIP myosin phosphatase Rho interacting protein 0.024285
USP9X ubiquitin specific peptidase 9, X-linked 0.0242527
ANKRD36 ankyrin repeat domain 36 0.0241943
TPR translocated promoter region, nuclear basket protein 0.0240701
BPTF bromodomain PHD finger transcription factor 0.0238123
FAR1 fatty acyl CoA reductase 1 0.0232479
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0232356
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0231005
PLXNA2 plexin A2 0.0230104
PICALM phosphatidylinositol binding clathrin assembly protein 0.0229026
ABTB3 ankyrin repeat and BTB domain containing 3 0.0228666
SETD5 SET domain containing 5 0.0228655
CUX1 cut-like homeobox 1 0.0226766
GLS2 glutaminase 2 (liver, mitochondrial) 0.0225065
ADAM9 ADAM metallopeptidase domain 9 0.0222134
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0221801
TRPC1 transient receptor potential cation channel, subfamily C, member 1 0.0218074
TNIP1 TNFAIP3 interacting protein 1 0.02172
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.0216898
VEGFC vascular endothelial growth factor C 0.0216895
RFTN1 raftlin, lipid raft linker 1 0.0214549
SDCCAG8 serologically defined colon cancer antigen 8 0.0213402
NCKAP1 NCK-associated protein 1 0.021192
DST dystonin 0.0211839
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0210816
CDH13 cadherin 13 0.0209896
RPL23 ribosomal protein L23 0.0205807
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0205572
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0204163
MYH9 myosin, heavy chain 9, non-muscle 0.0203019
COL5A2 collagen, type V, alpha 2 0.0202934
CYTH3 cytohesin 3 0.0202702
MBNL1 muscleblind-like splicing regulator 1 0.0202169
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.020142

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.32886
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.125769
VIM vimentin -0.0985904
IGFBP3 insulin-like growth factor binding protein 3 -0.0890783
FN1 fibronectin 1 -0.0883151
TMSB10 thymosin beta 10 -0.0847461
PDIA3 protein disulfide isomerase family A, member 3 -0.0720881
AHNAK AHNAK nucleoprotein -0.0709772
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0690608
CANX calnexin -0.0623082
ABI3BP ABI family, member 3 (NESH) binding protein -0.0584379
TPM4 tropomyosin 4 -0.0568748
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0535271
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0510613
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0498791
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0490242
DLG1 discs, large homolog 1 (Drosophila) -0.0418142
AKAP12 A kinase (PRKA) anchor protein 12 -0.0400745
HDLBP high density lipoprotein binding protein -0.038976
SUCNR1 succinate receptor 1 -0.0376109
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0371469
BHLHE40 basic helix-loop-helix family, member e40 -0.0365642
SQSTM1 sequestosome 1 -0.0348543
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0345588
COL8A1 collagen, type VIII, alpha 1 -0.0345574
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0345083
SLC38A1 solute carrier family 38, member 1 -0.034153
NDRG1 N-myc downstream regulated 1 -0.0338269
PTMA prothymosin, alpha -0.0333001
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0331344
VEGFA vascular endothelial growth factor A -0.0330301
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0326184
MAP1B microtubule-associated protein 1B -0.0319561
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0308739
ANXA2 annexin A2 -0.0305521
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0302364
TFRC transferrin receptor -0.0298443
SLC39A11 solute carrier family 39, member 11 -0.0296936
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0293831
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0291087
RND3 Rho family GTPase 3 -0.0287218
LRRC17 leucine rich repeat containing 17 -0.0285397
ELL2 elongation factor, RNA polymerase II, 2 -0.0285292
KDM3A lysine (K)-specific demethylase 3A -0.028339
LOC112694756 uncharaterized LOC112694756 -0.0273843
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0271535
MSI2 musashi RNA-binding protein 2 -0.0271262
CALR calreticulin -0.0269024
INSIG1 insulin induced gene 1 -0.0262056
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0261278
RRBP1 ribosome binding protein 1 -0.0259642
ENO1 enolase 1, (alpha) -0.0259488
PDIA6 protein disulfide isomerase family A, member 6 -0.0255212
POTEF POTE ankyrin domain family, member F -0.0252058
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit -0.0250464
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0242552
CENPF centromere protein F, 350/400kDa -0.0240832
HM13 histocompatibility (minor) 13 -0.024021
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.0239463
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0238689
LMAN1 lectin, mannose-binding, 1 -0.0238522
MX2 MX dynamin-like GTPase 2 -0.0238084
MMP12 matrix metallopeptidase 12 -0.0233403
SORBS2 sorbin and SH3 domain containing 2 -0.0232258
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0230054
EGR1 early growth response 1 -0.0228589
FTH1 ferritin, heavy polypeptide 1 -0.0227602
RNMT RNA (guanine-7-) methyltransferase -0.0224255
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0222999
ZMYND8 zinc finger, MYND-type containing 8 -0.0221782
SEC31A SEC31 homolog A (S. cerevisiae) -0.0219684
DDIT4 DNA-damage-inducible transcript 4 -0.0219496
SEC24D SEC24 family member D -0.0208547
IL7R interleukin 7 receptor -0.0201997
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0199113
JUN jun proto-oncogene -0.0198756
COPB1 coatomer protein complex, subunit beta 1 -0.0197942
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.019714
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -0.0195469
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0191622
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.019155
NGLY1 N-glycanase 1 -0.0188692
ARF4 ADP-ribosylation factor 4 -0.018849
KRT81 keratin 81, type II -0.0188404
MXI1 MAX interactor 1, dimerization protein -0.0187457
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0184351
BSG basigin (Ok blood group) -0.0181846
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0180422
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0179394
RAB1A RAB1A, member RAS oncogene family -0.0178603
NAV2 neuron navigator 2 -0.0177203
TRAM2 translocation associated membrane protein 2 -0.0176504
DTNA dystrobrevin, alpha -0.0176493
IQGAP1 IQ motif containing GTPase activating protein 1 -0.017629
BTG1 B-cell translocation gene 1, anti-proliferative -0.0175908
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.017567
IARS1 isoleucyl-tRNA synthetase 1 -0.0173077
ARF1 ADP-ribosylation factor 1 -0.0171163
ACBD3 acyl-CoA binding domain containing 3 -0.01705
SLFN5 schlafen family member 5 -0.0167571