Ciclopirox_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ciclopirox perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ciclopirox_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0984005
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0938952
RAB27B RAB27B, member RAS oncogene family 0.0909084
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0869967
ZEB2 zinc finger E-box binding homeobox 2 0.0802271
CD44 CD44 molecule (Indian blood group) 0.0790458
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0748507
TIMP1 TIMP metallopeptidase inhibitor 1 0.0722753
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0720759
SIK3 SIK family kinase 3 0.0707816
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0682774
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0666473
NRP1 neuropilin 1 0.0649467
MT2A metallothionein 2A 0.0631212
AKAP12 A kinase (PRKA) anchor protein 12 0.0626839
PCBP2 poly(rC) binding protein 2 0.0615032
FTL ferritin, light polypeptide 0.0574924
B2M beta-2-microglobulin 0.0539671
MCL1 myeloid cell leukemia 1 0.0533321
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0505215
GLCCI1 glucocorticoid induced 1 0.0503181
SMAD3 SMAD family member 3 0.0493771
ARHGAP5 Rho GTPase activating protein 5 0.0492509
KTN1 kinectin 1 (kinesin receptor) 0.0482909
HAS2 hyaluronan synthase 2 0.0482568
HMGA1 high mobility group AT-hook 1 0.0473168
NDRG1 N-myc downstream regulated 1 0.0473047
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0412841
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0412346
MACF1 microtubule-actin crosslinking factor 1 0.0408882
IFI44L interferon-induced protein 44-like 0.0402145
STK38L serine/threonine kinase 38 like 0.0394103
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0386823
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0373419
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.0370936
ECE1 endothelin converting enzyme 1 0.0370595
ANGPTL4 angiopoietin-like 4 0.0362451
ITGAV integrin, alpha V 0.0360459
RAD51B RAD51 paralog B 0.0360178
ANKRD28 ankyrin repeat domain 28 0.0354592
VIM vimentin 0.0351185
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0345729
ANTXR2 anthrax toxin receptor 2 0.0343609
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0333442
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0323587
MAST4 microtubule associated serine/threonine kinase family member 4 0.0322121
TGM2 transglutaminase 2 0.0321544
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0320132
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0317129
MSN moesin 0.0316052
SPRED2 sprouty-related, EVH1 domain containing 2 0.0315296
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0313079
RASAL2 RAS protein activator like 2 0.0308372
NPC1 Niemann-Pick disease, type C1 0.0306062
ACTN4 actinin, alpha 4 0.030477
SRRM2 serine/arginine repetitive matrix 2 0.0303318
FHL2 four and a half LIM domains 2 0.0302785
NTN4 netrin 4 0.0299636
NAP1L1 nucleosome assembly protein 1-like 1 0.0296958
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0290913
PRSS23 protease, serine, 23 0.0286901
PTBP3 polypyrimidine tract binding protein 3 0.028619
VMP1 vacuole membrane protein 1 0.0281425
ADD3 adducin 3 (gamma) 0.0277293
S100A6 S100 calcium binding protein A6 0.0276322
RPS12 ribosomal protein S12 0.0274809
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0268792
KMT2E lysine (K)-specific methyltransferase 2E 0.0268299
HEG1 heart development protein with EGF-like domains 1 0.0266032
SYNJ2 synaptojanin 2 0.026523
DPYSL3 dihydropyrimidinase-like 3 0.0254711
PARP8 poly (ADP-ribose) polymerase family, member 8 0.0254407
PDGFA platelet-derived growth factor alpha polypeptide 0.0253154
FNDC3B fibronectin type III domain containing 3B 0.0252122
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0251965
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0250666
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0248913
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0248888
NCOR2 nuclear receptor corepressor 2 0.0245027
WWTR1 WW domain containing transcription regulator 1 0.0243949
CDCP1 CUB domain containing protein 1 0.0242452
MYH9 myosin, heavy chain 9, non-muscle 0.024221
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0241167
PELI1 pellino E3 ubiquitin protein ligase 1 0.0240226
MYADM myeloid-associated differentiation marker 0.0239469
LRMDA leucine rich melanocyte differentiation associated 0.0239207
HMGA2 high mobility group AT-hook 2 0.023916
EZR ezrin 0.0239052
RNF144A ring finger protein 144A 0.0238699
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.023637
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.02363
VEGFA vascular endothelial growth factor A 0.0235659
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0232292
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0231448
ADM adrenomedullin 0.0229739
HIPK2 homeodomain interacting protein kinase 2 0.0227402
DOCK5 dedicator of cytokinesis 5 0.022602
PTK2 protein tyrosine kinase 2 0.0225772
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0225623
JMJD1C jumonji domain containing 1C 0.0225197

decreased expression

Symbol Name Standardized Value
CXCL8 chemokine (C-X-C motif) ligand 8 -0.271525
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.139271
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.133649
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.120714
NRG1 neuregulin 1 -0.108469
CANX calnexin -0.0780179
NAMPT nicotinamide phosphoribosyltransferase -0.0776864
RAB1A RAB1A, member RAS oncogene family -0.0776213
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0718239
GOLGA4 golgin A4 -0.0635413
LOX lysyl oxidase -0.0632321
SDK1 sidekick cell adhesion molecule 1 -0.0607949
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0585218
LMAN1 lectin, mannose-binding, 1 -0.0576802
CDH13 cadherin 13 -0.0559775
STC1 stanniocalcin 1 -0.0548815
HDLBP high density lipoprotein binding protein -0.0534796
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0520284
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0517713
KDM3A lysine (K)-specific demethylase 3A -0.051203
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0511573
DLG1 discs, large homolog 1 (Drosophila) -0.0503389
PDIA3 protein disulfide isomerase family A, member 3 -0.0495436
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0495287
TAS2R14 taste receptor, type 2, member 14 -0.0486327
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0481356
USP34 ubiquitin specific peptidase 34 -0.0454773
IGFBP3 insulin-like growth factor binding protein 3 -0.0453491
FAM20C family with sequence similarity 20, member C -0.043848
MTSS1 metastasis suppressor 1 -0.0427469
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0408323
ATG7 autophagy related 7 -0.0406376
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0406054
PDE4D phosphodiesterase 4D, cAMP-specific -0.0400384
SEC31A SEC31 homolog A (S. cerevisiae) -0.0400078
NCOA7 nuclear receptor coactivator 7 -0.0394219
KDM2A lysine (K)-specific demethylase 2A -0.0389765
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.038404
AHNAK AHNAK nucleoprotein -0.0383064
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0377197
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0374971
FBN1 fibrillin 1 -0.035903
TMEM263 transmembrane protein 263 -0.035441
VRK2 vaccinia related kinase 2 -0.034815
DNER delta/notch-like EGF repeat containing -0.0348012
MON2 MON2 homolog (S. cerevisiae) -0.0346433
FRMD4A FERM domain containing 4A -0.0343627
LIMCH1 LIM and calponin homology domains 1 -0.0341153
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0334174
PID1 phosphotyrosine interaction domain containing 1 -0.0328595
TFPI2 tissue factor pathway inhibitor 2 -0.0324901
TRIO trio Rho guanine nucleotide exchange factor -0.0322529
DENND4A DENN/MADD domain containing 4A -0.032077
RBM39 RNA binding motif protein 39 -0.0318023
FTH1 ferritin, heavy polypeptide 1 -0.0311598
TMSB10 thymosin beta 10 -0.0311421
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0305572
HM13 histocompatibility (minor) 13 -0.0302578
INSIG1 insulin induced gene 1 -0.0302035
PTGIS prostaglandin I2 (prostacyclin) synthase -0.0297557
ALDH1A3 aldehyde dehydrogenase 1 family, member A3 -0.0295013
ANKRD17 ankyrin repeat domain 17 -0.029133
IGF1R insulin-like growth factor 1 receptor -0.0286549
MEF2A myocyte enhancer factor 2A -0.0285977
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0285273
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0284835
WDR45B WD repeat domain 45B -0.0284061
ZMYND8 zinc finger, MYND-type containing 8 -0.0282325
COL12A1 collagen, type XII, alpha 1 -0.0282084
CEMIP cell migration inducing protein, hyaluronan binding -0.0278519
IER3 immediate early response 3 -0.02784
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.027824
USP15 ubiquitin specific peptidase 15 -0.0269974
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0267676
FBXL13 F-box and leucine-rich repeat protein 13 -0.0265398
DENND1A DENN/MADD domain containing 1A -0.0265221
LRRC49 leucine rich repeat containing 49 -0.0264621
THBS1 thrombospondin 1 -0.0262143
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.025431
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0252106
CP ceruloplasmin (ferroxidase) -0.0247716
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0247006
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0245031
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0243354
MBD5 methyl-CpG binding domain protein 5 -0.0243353
SEC24D SEC24 family member D -0.0242666
FANK1 fibronectin type III and ankyrin repeat domains 1 -0.0240651
FDPS farnesyl diphosphate synthase -0.0237453
BZW1 basic leucine zipper and W2 domains 1 -0.0236336
CDK14 cyclin-dependent kinase 14 -0.0235684
PDIA6 protein disulfide isomerase family A, member 6 -0.0233838
NUMB numb homolog (Drosophila) -0.0233132
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0232571
AAK1 AP2 associated kinase 1 -0.0230264
SNX14 sorting nexin 14 -0.0229275
REL v-rel avian reticuloendotheliosis viral oncogene homolog -0.0228709
NAV3 neuron navigator 3 -0.0226845
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0226642
OSMR oncostatin M receptor -0.0226495
CXCL5 chemokine (C-X-C motif) ligand 5 -0.022486