Ciclopirox_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ciclopirox perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ciclopirox_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.141527
NDRG1 N-myc downstream regulated 1 0.139881
PABPC1 poly(A) binding protein, cytoplasmic 1 0.120317
FTL ferritin, light polypeptide 0.10339
MSN moesin 0.0982407
IGFBP3 insulin-like growth factor binding protein 3 0.0861977
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0793159
MT2A metallothionein 2A 0.0741814
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0740052
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0676647
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0668984
TSC22D2 TSC22 domain family, member 2 0.0661401
IFI27 interferon, alpha-inducible protein 27 0.0613287
RCOR1 REST corepressor 1 0.0599212
RBM25 RNA binding motif protein 25 0.0592993
TXNIP thioredoxin interacting protein 0.056446
AKAP13 A kinase (PRKA) anchor protein 13 0.0530459
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0521932
G0S2 G0/G1 switch 2 0.0517351
FNDC3B fibronectin type III domain containing 3B 0.0509234
CCNL1 cyclin L1 0.050834
MYH9 myosin, heavy chain 9, non-muscle 0.049636
LAMB3 laminin, beta 3 0.0496349
POTEF POTE ankyrin domain family, member F 0.0494554
PTK2 protein tyrosine kinase 2 0.0491566
MYO6 myosin VI 0.0483207
RPS12 ribosomal protein S12 0.0476712
PRRC2C proline-rich coiled-coil 2C 0.0466162
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0458724
ZFP36L1 ZFP36 ring finger protein-like 1 0.0444265
UBC ubiquitin C 0.0425648
WSB1 WD repeat and SOCS box containing 1 0.0424719
KDM6A lysine (K)-specific demethylase 6A 0.0419548
MCL1 myeloid cell leukemia 1 0.0416848
MACF1 microtubule-actin crosslinking factor 1 0.0414146
CLDN4 claudin 4 0.0409155
KTN1 kinectin 1 (kinesin receptor) 0.0398207
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0395983
JUP junction plakoglobin 0.0391743
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0390006
HLA-B major histocompatibility complex, class I, B 0.0376215
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0369082
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0369055
KMT2C lysine (K)-specific methyltransferase 2C 0.036371
ENO2 enolase 2 (gamma, neuronal) 0.0357507
SETD5 SET domain containing 5 0.0353611
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0345559
ACTG1 actin gamma 1 0.034555
HMGA1 high mobility group AT-hook 1 0.0342397
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0341716
APLP2 amyloid beta (A4) precursor-like protein 2 0.0337489
PCBP2 poly(rC) binding protein 2 0.0337207
H3-3B H3.3 histone B 0.0332833
TMF1 TATA element modulatory factor 1 0.0327129
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0324586
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0319332
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0314136
EIF5 eukaryotic translation initiation factor 5 0.0314128
ESRP1 epithelial splicing regulatory protein 1 0.0311356
UBA6 ubiquitin-like modifier activating enzyme 6 0.0306944
RNF145 ring finger protein 145 0.0305706
FAM3C family with sequence similarity 3, member C 0.030472
MYO5B myosin VB 0.0304489
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0292485
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0292383
BBX bobby sox homolog (Drosophila) 0.029095
ERBIN erbb2 interacting protein 0.0283537
VEZT vezatin, adherens junctions transmembrane protein 0.0281104
TMEM165 transmembrane protein 165 0.028072
PELI1 pellino E3 ubiquitin protein ligase 1 0.0277363
SAMD12 sterile alpha motif domain containing 12 0.0275294
TRIO trio Rho guanine nucleotide exchange factor 0.027525
ADAM9 ADAM metallopeptidase domain 9 0.0274163
TUBB4B tubulin, beta 4B class IVb 0.027399
RASA2 RAS p21 protein activator 2 0.0270778
EPS8 epidermal growth factor receptor pathway substrate 8 0.0269211
WAC WW domain containing adaptor with coiled-coil 0.0266574
PARD3 par-3 family cell polarity regulator 0.0266111
TPM3 tropomyosin 3 0.0264605
CHD1 chromodomain helicase DNA binding protein 1 0.0262925
RPL37 ribosomal protein L37 0.0257938
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0256175
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0255676
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.025516
B2M beta-2-microglobulin 0.0253723
CSTB cystatin B (stefin B) 0.0252684
ITGAV integrin, alpha V 0.0250727
RAD51B RAD51 paralog B 0.0246739
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.024625
DUSP5 dual specificity phosphatase 5 0.0245832
BCL2L1 BCL2-like 1 0.0244669
RPL9 ribosomal protein L9 0.0243866
BRD2 bromodomain containing 2 0.0241967
RAB6A RAB6A, member RAS oncogene family 0.0237909
CTNND1 catenin (cadherin-associated protein), delta 1 0.0236749
NOTCH2 notch 2 0.0235593
ARRDC3 arrestin domain containing 3 0.0235419
ADM adrenomedullin 0.0233489
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0232815
NRIP1 nuclear receptor interacting protein 1 0.023253

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.443085
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.232367
FN1 fibronectin 1 -0.10684
CANX calnexin -0.0973972
AHNAK AHNAK nucleoprotein -0.0898575
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0734167
RPL34 ribosomal protein L34 -0.0695526
TMSB10 thymosin beta 10 -0.0686781
RPLP1 ribosomal protein, large, P1 -0.0639613
RPL35A ribosomal protein L35a -0.0629006
TMSB4X thymosin beta 4, X-linked -0.0603826
PTMA prothymosin, alpha -0.0594893
RAD21 RAD21 homolog (S. pombe) -0.0587668
NAMPT nicotinamide phosphoribosyltransferase -0.0547041
ANXA2 annexin A2 -0.0546644
TM4SF1 transmembrane 4 L six family member 1 -0.0543814
HDLBP high density lipoprotein binding protein -0.0539851
ARF1 ADP-ribosylation factor 1 -0.0529714
TPM4 tropomyosin 4 -0.0515106
CCND1 cyclin D1 -0.0512981
TKT transketolase -0.0507481
SQSTM1 sequestosome 1 -0.0472124
GNAS GNAS complex locus -0.0466979
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.046676
LMO7 LIM domain 7 -0.045607
RPL4 ribosomal protein L4 -0.0446415
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0443117
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0442423
KDM3A lysine (K)-specific demethylase 3A -0.041509
RPL8 ribosomal protein L8 -0.0412071
TPT1 tumor protein, translationally-controlled 1 -0.0389661
TFRC transferrin receptor -0.038956
S100A10 S100 calcium binding protein A10 -0.0383992
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0378633
TMEM263 transmembrane protein 263 -0.0369875
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0352742
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0350979
SLC38A1 solute carrier family 38, member 1 -0.0350342
PGK1 phosphoglycerate kinase 1 -0.0346619
SH3KBP1 SH3-domain kinase binding protein 1 -0.0345594
RPS6 ribosomal protein S6 -0.0343051
TMEM123 transmembrane protein 123 -0.0329374
FTH1 ferritin, heavy polypeptide 1 -0.0314819
RPL6 ribosomal protein L6 -0.0306352
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0306076
PDIA4 protein disulfide isomerase family A, member 4 -0.0305869
AHNAK2 AHNAK nucleoprotein 2 -0.0294167
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0293358
IFRD1 interferon-related developmental regulator 1 -0.0288977
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0286008
KRT18 keratin 18, type I -0.0283792
ASPH aspartate beta-hydroxylase -0.0279503
RPS8 ribosomal protein S8 -0.0273259
CRABP2 cellular retinoic acid binding protein 2 -0.0271536
ARHGAP5 Rho GTPase activating protein 5 -0.027107
PLAU plasminogen activator, urokinase -0.0270282
HMGB2 high mobility group box 2 -0.0255928
CALU calumenin -0.0251886
ENO1 enolase 1, (alpha) -0.0248243
RPL38 ribosomal protein L38 -0.0247404
HMGB1 high mobility group box 1 -0.0247201
BHLHE40 basic helix-loop-helix family, member e40 -0.0236126
RPS27A ribosomal protein S27a -0.0235491
COPB1 coatomer protein complex, subunit beta 1 -0.0235407
RAB1A RAB1A, member RAS oncogene family -0.0230323
RACK1 receptor for activated C kinase 1 -0.0230211
GARS1 glycyl-tRNA synthetase 1 -0.0229924
CAPN2 calpain 2, (m/II) large subunit -0.0229279
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0228477
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0226879
YBX1 Y box binding protein 1 -0.0224386
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0224354
NCOA7 nuclear receptor coactivator 7 -0.0224259
ZNF217 zinc finger protein 217 -0.0223987
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0221613
LOC112694756 uncharaterized LOC112694756 -0.0221118
INPP5F inositol polyphosphate-5-phosphatase F -0.022087
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0220622
BZW1 basic leucine zipper and W2 domains 1 -0.0219433
MAP4 microtubule-associated protein 4 -0.0217271
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0217172
MARCHF6 membrane associated ring-CH-type finger 6 -0.0213598
DSG2 desmoglein 2 -0.0208598
SAMD4A sterile alpha motif domain containing 4A -0.0207121
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0206265
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0203853
STK17A serine/threonine kinase 17a -0.0200618
RPL32 ribosomal protein L32 -0.0200613
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0199983
PHF3 PHD finger protein 3 -0.0199851
IER3 immediate early response 3 -0.0199794
RAB1B RAB1B, member RAS oncogene family -0.0199346
ZC3H11A zinc finger CCCH-type containing 11A -0.0198533
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.019848
VIM vimentin -0.0196886
DEK DEK proto-oncogene -0.0196082
DSPP dentin sialophosphoprotein -0.019599
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0195402
EREG epiregulin -0.0193757
IFIH1 interferon induced with helicase C domain 1 -0.0192285