Cinacalcet_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cinacalcet perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cinacalcet_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.291716
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.201321
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.156545
EEF2 eukaryotic translation elongation factor 2 0.153465
TMSB4X thymosin beta 4, X-linked 0.113564
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.108779
DLG1 discs, large homolog 1 (Drosophila) 0.100539
CD44 CD44 molecule (Indian blood group) 0.0950791
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0877291
EHBP1 EH domain binding protein 1 0.0786486
CANX calnexin 0.0782961
TSC22D1 TSC22 domain family, member 1 0.0753054
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0726023
SLC38A2 solute carrier family 38, member 2 0.0704884
MBNL2 muscleblind-like splicing regulator 2 0.0645682
EFNA5 ephrin-A5 0.063555
PGK1 phosphoglycerate kinase 1 0.0631984
MYOF myoferlin 0.0564247
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.054567
LDHA lactate dehydrogenase A 0.054206
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0531984
PLK2 polo-like kinase 2 0.0508998
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0483165
EPHA4 EPH receptor A4 0.0482925
APP amyloid beta (A4) precursor protein 0.0471646
ARHGAP5 Rho GTPase activating protein 5 0.0471377
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0450986
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.0450261
ENO2 enolase 2 (gamma, neuronal) 0.0445658
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0445292
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0438583
PTPRF protein tyrosine phosphatase, receptor type, F 0.0419514
RAI1 retinoic acid induced 1 0.0403418
UBC ubiquitin C 0.0400833
NCEH1 neutral cholesterol ester hydrolase 1 0.0391205
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0384578
TMEM123 transmembrane protein 123 0.0371947
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0363517
PCBP2 poly(rC) binding protein 2 0.0363229
PLIN2 perilipin 2 0.0349768
LRRC49 leucine rich repeat containing 49 0.0348044
TXNIP thioredoxin interacting protein 0.0346976
TNS3 tensin 3 0.0343919
KLF6 Kruppel-like factor 6 0.033162
HOOK2 hook microtubule-tethering protein 2 0.0327699
CALR calreticulin 0.0322941
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0317871
FNIP1 folliculin interacting protein 1 0.0316731
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0314499
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0313367
JUN jun proto-oncogene 0.0306286
ARF6 ADP-ribosylation factor 6 0.0304704
ZDHHC14 zinc finger, DHHC-type containing 14 0.0303692
TOP1 topoisomerase (DNA) I 0.0302314
HDLBP high density lipoprotein binding protein 0.0301155
RAP2B RAP2B, member of RAS oncogene family 0.0297028
AFF4 AF4/FMR2 family, member 4 0.029605
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0291845
TTC3 tetratricopeptide repeat domain 3 0.0291682
EREG epiregulin 0.028917
ESYT2 extended synaptotagmin-like protein 2 0.0281837
DPYSL2 dihydropyrimidinase-like 2 0.0276054
IQGAP1 IQ motif containing GTPase activating protein 1 0.0270753
ZFP36L1 ZFP36 ring finger protein-like 1 0.0268591
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0265277
PATJ PATJ crumbs cell polarity complex component 0.0264724
CD109 CD109 molecule 0.0264159
SDK1 sidekick cell adhesion molecule 1 0.0263933
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0260918
EIF4H eukaryotic translation initiation factor 4H 0.0260273
DENND1A DENN/MADD domain containing 1A 0.025972
RNF213 ring finger protein 213 0.0259475
LOC112694756 uncharaterized LOC112694756 0.0257486
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0253731
LOXL2 lysyl oxidase-like 2 0.0253618
SZRD1 SUZ RNA binding domain containing 1 0.025337
AHNAK AHNAK nucleoprotein 0.0251887
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0251765
PIAS2 protein inhibitor of activated STAT, 2 0.0249425
DOCK11 dedicator of cytokinesis 11 0.0248877
HDAC9 histone deacetylase 9 0.0243487
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.023727
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0233117
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0232668
XPOT exportin, tRNA 0.0231875
WARS1 tryptophanyl-tRNA synthetase 1 0.0230124
NDRG1 N-myc downstream regulated 1 0.0229536
LMAN1 lectin, mannose-binding, 1 0.0220968
KDM4C lysine (K)-specific demethylase 4C 0.0220903
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.021908
ANXA2 annexin A2 0.0218414
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0214964
BZW1 basic leucine zipper and W2 domains 1 0.0214683
SOD2 superoxide dismutase 2, mitochondrial 0.0214455
RERE arginine-glutamic acid dipeptide (RE) repeats 0.021372
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0210671
CSMD3 CUB and Sushi multiple domains 3 0.0209324
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0209115
CDK19 cyclin-dependent kinase 19 0.0208241
TIMP2 TIMP metallopeptidase inhibitor 2 0.0205145

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.159205
MT2A metallothionein 2A -0.148721
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.1089
KTN1 kinectin 1 (kinesin receptor) -0.0733738
RPS2 ribosomal protein S2 -0.0732405
RPS8 ribosomal protein S8 -0.0677598
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0668956
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0661411
RPS19 ribosomal protein S19 -0.0612084
TP63 tumor protein p63 -0.0598571
RPL23 ribosomal protein L23 -0.0520958
WSB1 WD repeat and SOCS box containing 1 -0.0507608
TM4SF1 transmembrane 4 L six family member 1 -0.0500701
CENPF centromere protein F, 350/400kDa -0.0479167
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0466984
ZFAND3 zinc finger, AN1-type domain 3 -0.0460817
RPS6 ribosomal protein S6 -0.0449972
KMT2E lysine (K)-specific methyltransferase 2E -0.0447917
RPL26 ribosomal protein L26 -0.0443559
RPL36 ribosomal protein L36 -0.0441073
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.042875
RBM39 RNA binding motif protein 39 -0.0424908
RPS12 ribosomal protein S12 -0.0416635
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.040971
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0397548
YBX3 Y box binding protein 3 -0.0394952
PRRC2C proline-rich coiled-coil 2C -0.0393265
EMP1 epithelial membrane protein 1 -0.0380922
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.037986
RPL38 ribosomal protein L38 -0.0378825
SRPK2 SRSF protein kinase 2 -0.0377244
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0376001
RPL37A ribosomal protein L37a -0.0368676
EIF5B eukaryotic translation initiation factor 5B -0.0368416
RPL19 ribosomal protein L19 -0.0366483
NAP1L1 nucleosome assembly protein 1-like 1 -0.0344239
RPL35A ribosomal protein L35a -0.0344014
RPL12 ribosomal protein L12 -0.0339196
SPAG9 sperm associated antigen 9 -0.0335954
ANKRD12 ankyrin repeat domain 12 -0.0331787
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0325021
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0314226
YBX1 Y box binding protein 1 -0.0310335
SMC4 structural maintenance of chromosomes 4 -0.0309587
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0303521
NAMPT nicotinamide phosphoribosyltransferase -0.0293828
CAPRIN2 caprin family member 2 -0.0293423
SEPTIN7 septin 7 -0.0292996
JMJD1C jumonji domain containing 1C -0.0292926
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0289059
TPT1 tumor protein, translationally-controlled 1 -0.0280678
HMGB2 high mobility group box 2 -0.0276278
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0276252
ZNF292 zinc finger protein 292 -0.0268865
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0265778
NOP58 NOP58 ribonucleoprotein -0.026429
NCOR1 nuclear receptor corepressor 1 -0.0262992
FTL ferritin, light polypeptide -0.0260019
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0259495
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0254854
SQSTM1 sequestosome 1 -0.0250781
RPL34 ribosomal protein L34 -0.0247408
CKAP5 cytoskeleton associated protein 5 -0.0246937
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0246476
CFLAR CASP8 and FADD-like apoptosis regulator -0.0243149
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0243141
RPS3 ribosomal protein S3 -0.0240226
RPS13 ribosomal protein S13 -0.0239465
MBNL1 muscleblind-like splicing regulator 1 -0.023683
PKM pyruvate kinase, muscle -0.0235778
BCAR3 breast cancer anti-estrogen resistance 3 -0.0233607
PRDX1 peroxiredoxin 1 -0.0232571
RPL11 ribosomal protein L11 -0.0230352
FUS FUS RNA binding protein -0.0229366
BRD2 bromodomain containing 2 -0.0227541
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0226895
FERMT1 fermitin family member 1 -0.0224576
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0221522
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0220588
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0220389
RPL13A ribosomal protein L13a -0.022013
CSNK1A1 casein kinase 1, alpha 1 -0.0218567
RPL7 ribosomal protein L7 -0.0217695
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0216609
TRA2B transformer 2 beta homolog (Drosophila) -0.0216077
RPS17 ribosomal protein S17 -0.0215933
CDC73 cell division cycle 73 -0.0214432
BIRC2 baculoviral IAP repeat containing 2 -0.0209846
USP34 ubiquitin specific peptidase 34 -0.0209473
CEP170 centrosomal protein 170kDa -0.0209335
PLAUR plasminogen activator, urokinase receptor -0.0209256
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0208659
RPS18 ribosomal protein S18 -0.0207753
POM121C POM121 transmembrane nucleoporin C -0.0205487
PUM2 pumilio RNA-binding family member 2 -0.0204991
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0204967
SET SET nuclear proto-oncogene -0.0204619
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0202334
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0201533
RPS10 ribosomal protein S10 -0.0200546