Cinacalcet_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cinacalcet perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cinacalcet_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.17127
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.160433
FN1 fibronectin 1 0.112116
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0971828
CANX calnexin 0.0813162
CXCL8 chemokine (C-X-C motif) ligand 8 0.075765
FTH1 ferritin, heavy polypeptide 1 0.0532931
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0475848
RAI14 retinoic acid induced 14 0.0445582
STC2 stanniocalcin 2 0.0437097
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0435454
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0372328
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0357912
SEC23A Sec23 homolog A (S. cerevisiae) 0.0357362
SUCO SUN domain containing ossification factor 0.0346311
TMSB4X thymosin beta 4, X-linked 0.0345469
CD109 CD109 molecule 0.0345389
MRPS6 mitochondrial ribosomal protein S6 0.0342491
HDLBP high density lipoprotein binding protein 0.0340181
TTC3 tetratricopeptide repeat domain 3 0.0339304
SEC31A SEC31 homolog A (S. cerevisiae) 0.0328341
ENO2 enolase 2 (gamma, neuronal) 0.0321907
GLUL glutamate-ammonia ligase 0.0320893
EXT1 exostosin glycosyltransferase 1 0.0313718
VCL vinculin 0.0304584
HILPDA hypoxia inducible lipid droplet-associated 0.0300916
SQSTM1 sequestosome 1 0.0294947
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0292718
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0292708
PCBP2 poly(rC) binding protein 2 0.0287477
CALR calreticulin 0.02776
COPA coatomer protein complex, subunit alpha 0.0277127
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0272875
ZC3H11A zinc finger CCCH-type containing 11A 0.0272071
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0264326
LCORL ligand dependent nuclear receptor corepressor-like 0.0264157
BIRC6 baculoviral IAP repeat containing 6 0.0263954
PLIN2 perilipin 2 0.0262126
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0257453
ZCCHC7 zinc finger, CCHC domain containing 7 0.0248225
BHLHE40 basic helix-loop-helix family, member e40 0.0244405
LOC112694756 uncharaterized LOC112694756 0.0242708
SOD2 superoxide dismutase 2, mitochondrial 0.0242486
ANKRD17 ankyrin repeat domain 17 0.0240576
ATXN2 ataxin 2 0.0238793
WDR45B WD repeat domain 45B 0.0235402
GRB10 growth factor receptor-bound protein 10 0.023489
MARCHF6 membrane associated ring-CH-type finger 6 0.0234659
LIFR leukemia inhibitory factor receptor alpha 0.0228954
EEF2 eukaryotic translation elongation factor 2 0.0224769
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0223986
KSR1 kinase suppressor of ras 1 0.0223512
RUNX2 runt-related transcription factor 2 0.0222553
SRP54 signal recognition particle 54kDa 0.0217387
GANAB glucosidase, alpha; neutral AB 0.0213243
RAB6A RAB6A, member RAS oncogene family 0.0212424
FAM193A family with sequence similarity 193, member A 0.0208119
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0205076
GLG1 golgi glycoprotein 1 0.0204736
FNDC3A fibronectin type III domain containing 3A 0.0204535
TBC1D22A TBC1 domain family, member 22A 0.0202851
PGK1 phosphoglycerate kinase 1 0.0202646
ACBD3 acyl-CoA binding domain containing 3 0.0201574
TPR translocated promoter region, nuclear basket protein 0.0201489
COG5 component of oligomeric golgi complex 5 0.019947
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 0.0198969
RICTOR RPTOR independent companion of MTOR, complex 2 0.0198439
USP3 ubiquitin specific peptidase 3 0.0198292
ADIPOR2 adiponectin receptor 2 0.0197365
DDIT4 DNA-damage-inducible transcript 4 0.0194698
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0194025
PDLIM5 PDZ and LIM domain 5 0.0193482
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.019326
FAM20C family with sequence similarity 20, member C 0.018965
ARF1 ADP-ribosylation factor 1 0.0188212
VMP1 vacuole membrane protein 1 0.0187186
FNIP1 folliculin interacting protein 1 0.018484
PIM3 Pim-3 proto-oncogene, serine/threonine kinase 0.0178898
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0178681
FLNA filamin A, alpha 0.0178518
ARHGAP35 Rho GTPase activating protein 35 0.0176223
VEGFA vascular endothelial growth factor A 0.0173811
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0172603
AHRR aryl-hydrocarbon receptor repressor 0.0172189
NCOA7 nuclear receptor coactivator 7 0.0172145
SPDYA speedy/RINGO cell cycle regulator family member A 0.0170194
PTGES2 prostaglandin E synthase 2 0.0169058
SAFB2 scaffold attachment factor B2 0.0168853
WDR43 WD repeat domain 43 0.0168781
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0168362
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0163368
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 0.0163165
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0161815
KDM5B lysine (K)-specific demethylase 5B 0.0159127
PSEN1 presenilin 1 0.0158105
ANKHD1 ankyrin repeat and KH domain containing 1 0.0157408
CCDC47 coiled-coil domain containing 47 0.0156349
LOX lysyl oxidase 0.0156126
HIPK2 homeodomain interacting protein kinase 2 0.0155718
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0155126

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.15952
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.145877
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.126561
MT2A metallothionein 2A -0.11786
ASPH aspartate beta-hydroxylase -0.0873278
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0831596
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0786488
CENPF centromere protein F, 350/400kDa -0.0642293
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0609124
RPS6 ribosomal protein S6 -0.0546913
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0524949
B2M beta-2-microglobulin -0.04822
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0469755
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0466593
RPS2 ribosomal protein S2 -0.0459456
RPL37A ribosomal protein L37a -0.0424576
RPL26 ribosomal protein L26 -0.0422523
FTL ferritin, light polypeptide -0.0409373
PTMA prothymosin, alpha -0.0406708
MAP1B microtubule-associated protein 1B -0.0400065
HMGA2 high mobility group AT-hook 2 -0.0396869
ELL2 elongation factor, RNA polymerase II, 2 -0.0362191
KTN1 kinectin 1 (kinesin receptor) -0.0353051
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0343801
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0336244
RPL9 ribosomal protein L9 -0.0327556
RPS12 ribosomal protein S12 -0.0310747
PDE4D phosphodiesterase 4D, cAMP-specific -0.0304672
LRMDA leucine rich melanocyte differentiation associated -0.030164
PTK2 protein tyrosine kinase 2 -0.0296737
FNDC3B fibronectin type III domain containing 3B -0.0293264
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0290586
SMYD3 SET and MYND domain containing 3 -0.0288387
JMJD1C jumonji domain containing 1C -0.0285905
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0284932
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.027407
RPL11 ribosomal protein L11 -0.0273184
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0270361
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0260853
ATXN1 ataxin 1 -0.0260712
SMAD3 SMAD family member 3 -0.0257177
PRRC2C proline-rich coiled-coil 2C -0.0255733
RACK1 receptor for activated C kinase 1 -0.0252605
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0251738
FOXP1 forkhead box P1 -0.0251712
TMEM165 transmembrane protein 165 -0.0247578
CD44 CD44 molecule (Indian blood group) -0.0247162
RPL12 ribosomal protein L12 -0.0241627
RBM39 RNA binding motif protein 39 -0.0237801
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0237786
DUSP5 dual specificity phosphatase 5 -0.0235359
RPL28 ribosomal protein L28 -0.0234285
ZMYND8 zinc finger, MYND-type containing 8 -0.0233633
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0233591
FHIT fragile histidine triad -0.0231491
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -0.0226962
IFI27 interferon, alpha-inducible protein 27 -0.0226092
NAP1L1 nucleosome assembly protein 1-like 1 -0.0225895
IFI16 interferon, gamma-inducible protein 16 -0.022554
OSMR oncostatin M receptor -0.0225384
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) -0.0223519
RPS19 ribosomal protein S19 -0.0222915
RPL38 ribosomal protein L38 -0.0222319
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0221315
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0220985
RPS8 ribosomal protein S8 -0.0220696
PARD3 par-3 family cell polarity regulator -0.0218585
GCC2 GRIP and coiled-coil domain containing 2 -0.0217238
RPS3 ribosomal protein S3 -0.0216909
RPS27 ribosomal protein S27 -0.0213952
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0213419
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0212632
RPLP1 ribosomal protein, large, P1 -0.0211682
EXOC4 exocyst complex component 4 -0.021099
KIF5B kinesin family member 5B -0.0209013
RPS27A ribosomal protein S27a -0.0208767
RPS16 ribosomal protein S16 -0.0207347
CSNK1A1 casein kinase 1, alpha 1 -0.0207193
IFI44L interferon-induced protein 44-like -0.0206296
SPIDR scaffolding protein involved in DNA repair -0.020406
PUM2 pumilio RNA-binding family member 2 -0.020376
PHC2 polyhomeotic homolog 2 (Drosophila) -0.0203558
EIF5B eukaryotic translation initiation factor 5B -0.0202055
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.020159
FRY furry homolog (Drosophila) -0.0201401
ETV6 ets variant 6 -0.0200766
FNBP1 formin binding protein 1 -0.0200053
SEPTIN9 septin 9 -0.0199653
ZNF292 zinc finger protein 292 -0.0198342
RPS23 ribosomal protein S23 -0.0197989
MCTP2 multiple C2 domains, transmembrane 2 -0.0197168
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0196059
ANLN anillin, actin binding protein -0.0194462
AREG amphiregulin -0.0194309
RPL21 ribosomal protein L21 -0.0191401
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0191333
SLTM SAFB-like, transcription modulator -0.0191155
KMT2E lysine (K)-specific methyltransferase 2E -0.0191074
RPL18 ribosomal protein L18 -0.0188955
PLAUR plasminogen activator, urokinase receptor -0.0188483