Citalopram (hydrobromide)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Citalopram (hydrobromide) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Citalopram (hydrobromide)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DSPP dentin sialophosphoprotein 0.134372
TF transferrin 0.0848634
FN1 fibronectin 1 0.0841622
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0808886
RACK1 receptor for activated C kinase 1 0.0649918
ERRFI1 ERBB receptor feedback inhibitor 1 0.062226
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0542023
VEGFA vascular endothelial growth factor A 0.0518276
C3 complement component 3 0.0466802
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0452492
PEG3 paternally expressed 3 0.0435646
IGF2 insulin-like growth factor 2 0.0406326
MATN3 matrilin 3 0.0402083
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0370625
EEF2 eukaryotic translation elongation factor 2 0.0339844
PTPRM protein tyrosine phosphatase, receptor type, M 0.0333856
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0311101
TNS1 tensin 1 0.0309116
A2M alpha-2-macroglobulin 0.0303918
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0295188
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0294259
RPL3 ribosomal protein L3 0.0278678
CRY1 cryptochrome circadian clock 1 0.0259808
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0252728
CCNL1 cyclin L1 0.0242503
GPC6 glypican 6 0.0233192
DDIT4 DNA-damage-inducible transcript 4 0.0226988
FGA fibrinogen alpha chain 0.0226962
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.02248
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0220771
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0220659
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.021339
FGG fibrinogen gamma chain 0.0209503
PCM1 pericentriolar material 1 0.0193446
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0188343
DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) 0.0184293
RAB11FIP3 RAB11 family interacting protein 3 (class II) 0.0181583
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0177918
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0164798
SCARB1 scavenger receptor class B, member 1 0.0164688
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 0.0164112
HGD homogentisate 1,2-dioxygenase 0.0163071
ESYT2 extended synaptotagmin-like protein 2 0.0161327
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0159062
RSRC2 arginine/serine-rich coiled-coil 2 0.0158833
AFDN afadin, adherens junction formation factor 0.015845
MYO1B myosin IB 0.0155345
TPST1 tyrosylprotein sulfotransferase 1 0.0150249
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 0.0149021
SEPTIN9 septin 9 0.0148913
INSIG2 insulin induced gene 2 0.01481
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0145894
CHKA choline kinase alpha 0.0143748
TGOLN2 trans-golgi network protein 2 0.0143721
AHSG alpha-2-HS-glycoprotein 0.0143484
ORM1 orosomucoid 1 0.014215
FGL1 fibrinogen-like 1 0.0141007
FTH1 ferritin, heavy polypeptide 1 0.0140286
OSBPL9 oxysterol binding protein-like 9 0.013951
CENPF centromere protein F, 350/400kDa 0.0137588
RPS15A ribosomal protein S15a 0.0137094
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0134122
MKI67 marker of proliferation Ki-67 0.0133689
NPTN neuroplastin 0.0133564
PLEC plectin 0.0133525
WDR43 WD repeat domain 43 0.0133147
ZMIZ1 zinc finger, MIZ-type containing 1 0.0131957
SERF2 small EDRK-rich factor 2 0.0131321
U2SURP U2 snRNP-associated SURP domain containing 0.013065
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 0.0129346
SYN3 synapsin III 0.0129285
RNASE3 ribonuclease, RNase A family, 3 0.0128782
TBL1X transducin (beta)-like 1X-linked 0.0125177
MTUS1 microtubule associated tumor suppressor 1 0.0124975
HPN hepsin 0.0124118
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0123325
ITIH5 inter-alpha-trypsin inhibitor heavy chain family, member 5 0.012242
NCKAP1 NCK-associated protein 1 0.012202
KLF10 Kruppel-like factor 10 0.012201
PBX2 pre-B-cell leukemia homeobox 2 0.0121512
SORT1 sortilin 1 0.0121117
STC2 stanniocalcin 2 0.0121047
FKBP5 FK506 binding protein 5 0.0120646
CD109 CD109 molecule 0.0120355
USP9X ubiquitin specific peptidase 9, X-linked 0.0119727
LDLRAD4 low density lipoprotein receptor class A domain containing 4 0.0118459
SNX13 sorting nexin 13 0.0117714
CEP250 centrosomal protein 250kDa 0.0116914
KDM7A lysine (K)-specific demethylase 7A 0.0116506
SEC24C SEC24 family member C 0.0115843
SRRM1 serine/arginine repetitive matrix 1 0.0115383
RBM33 RNA binding motif protein 33 0.0115147
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0114559
WWC1 WW and C2 domain containing 1 0.0113901
ARHGAP26 Rho GTPase activating protein 26 0.0113278
STT3A STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 0.0113138
CLMN calmin (calponin-like, transmembrane) 0.0113033
RSBN1L round spermatid basic protein 1-like 0.0112502
FOXN3 forkhead box N3 0.0111919
KIF5B kinesin family member 5B 0.0111563

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.190115
ENO1 enolase 1, (alpha) -0.189457
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.185839
RPS27A ribosomal protein S27a -0.158625
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.13577
UBC ubiquitin C -0.128011
GPC3 glypican 3 -0.125159
AKAP12 A kinase (PRKA) anchor protein 12 -0.116314
ASPH aspartate beta-hydroxylase -0.107563
RPS24 ribosomal protein S24 -0.102308
TPT1 tumor protein, translationally-controlled 1 -0.10222
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0989183
TMSB10 thymosin beta 10 -0.0939404
SVIL supervillin -0.0882353
SLC38A2 solute carrier family 38, member 2 -0.0826596
RPS8 ribosomal protein S8 -0.080482
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0784376
TM4SF1 transmembrane 4 L six family member 1 -0.0777741
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0772848
MT2A metallothionein 2A -0.0762689
SAMD4A sterile alpha motif domain containing 4A -0.0748065
IGFBP1 insulin-like growth factor binding protein 1 -0.0682719
RPL37A ribosomal protein L37a -0.0677946
RPS6 ribosomal protein S6 -0.0621836
RPLP1 ribosomal protein, large, P1 -0.0610369
RPL23 ribosomal protein L23 -0.0599707
SDC4 syndecan 4 -0.059339
NAP1L1 nucleosome assembly protein 1-like 1 -0.0582706
RPS12 ribosomal protein S12 -0.0574129
FRMD5 FERM domain containing 5 -0.0568622
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0559177
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0557764
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0547996
KRT8 keratin 8, type II -0.0540974
ELL2 elongation factor, RNA polymerase II, 2 -0.0535296
APOA2 apolipoprotein A-II -0.0522148
STAU1 staufen double-stranded RNA binding protein 1 -0.0504273
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0503841
RPS21 ribosomal protein S21 -0.0499296
RPL34 ribosomal protein L34 -0.0494624
RPLP2 ribosomal protein, large, P2 -0.049096
ZBTB20 zinc finger and BTB domain containing 20 -0.0487853
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0477166
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0475253
RPL9 ribosomal protein L9 -0.0466287
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.045654
HMGA1 high mobility group AT-hook 1 -0.0452248
PTMA prothymosin, alpha -0.0450019
RPS19 ribosomal protein S19 -0.0448882
AHNAK AHNAK nucleoprotein -0.0446936
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0444105
RPS29 ribosomal protein S29 -0.0431238
RPL38 ribosomal protein L38 -0.043107
RPS13 ribosomal protein S13 -0.0429727
APOB apolipoprotein B -0.042214
ATXN1 ataxin 1 -0.0421508
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0420567
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0418154
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0410223
PDGFB platelet-derived growth factor beta polypeptide -0.0409644
RPL5 ribosomal protein L5 -0.0403869
JUN jun proto-oncogene -0.0395897
RPL12 ribosomal protein L12 -0.0394719
LDHA lactate dehydrogenase A -0.0393713
CANX calnexin -0.039189
RPS25 ribosomal protein S25 -0.0391036
EIF4A1 eukaryotic translation initiation factor 4A1 -0.03899
FAM107B family with sequence similarity 107, member B -0.0377954
EHBP1 EH domain binding protein 1 -0.0369981
APOE apolipoprotein E -0.036512
ACTG1 actin gamma 1 -0.0363459
ZMYND8 zinc finger, MYND-type containing 8 -0.0361681
RPL31 ribosomal protein L31 -0.035981
PKM pyruvate kinase, muscle -0.0358336
FLNB filamin B, beta -0.0355657
DSCAM Down syndrome cell adhesion molecule -0.0352054
CCL20 chemokine (C-C motif) ligand 20 -0.0351275
ZFAND3 zinc finger, AN1-type domain 3 -0.0346792
RPS23 ribosomal protein S23 -0.0345862
MRTFA myocardin related transcription factor A -0.0340986
FOXP1 forkhead box P1 -0.0339152
LOC112694756 uncharaterized LOC112694756 -0.0338489
RPS5 ribosomal protein S5 -0.0335154
FTL ferritin, light polypeptide -0.0334824
CEMIP2 cell migration inducing hyaluronidase 2 -0.0331998
ANKRD12 ankyrin repeat domain 12 -0.0330608
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0324786
KDM3A lysine (K)-specific demethylase 3A -0.0324547
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0322751
PGK1 phosphoglycerate kinase 1 -0.0320773
RIGI RNA sensor RIG-I -0.0318568
ANO6 anoctamin 6 -0.0313199
RPLP0 ribosomal protein, large, P0 -0.0312573
RPS3 ribosomal protein S3 -0.0311649
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0310356
PLIN2 perilipin 2 -0.0308508
MAP1B microtubule-associated protein 1B -0.0308184
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0307995
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0307786
PDIA3 protein disulfide isomerase family A, member 3 -0.0307774