Citalopram (hydrobromide)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Citalopram (hydrobromide) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Citalopram (hydrobromide)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
STC1 stanniocalcin 1 0.101478
VIM vimentin 0.0975966
NDRG1 N-myc downstream regulated 1 0.0918829
GOLGA4 golgin A4 0.0777769
KMT2E lysine (K)-specific methyltransferase 2E 0.0564625
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0562544
CENPF centromere protein F, 350/400kDa 0.0561611
AFAP1 actin filament associated protein 1 0.0516667
DSCAM Down syndrome cell adhesion molecule 0.0508896
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0504531
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0498395
ZNF292 zinc finger protein 292 0.0489851
WWTR1 WW domain containing transcription regulator 1 0.0467539
PGK1 phosphoglycerate kinase 1 0.0465004
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0462485
MKI67 marker of proliferation Ki-67 0.0450572
ITCH itchy E3 ubiquitin protein ligase 0.0442585
SNAP25 synaptosomal-associated protein, 25kDa 0.0390385
MYH9 myosin, heavy chain 9, non-muscle 0.0389337
MCTP2 multiple C2 domains, transmembrane 2 0.0366773
UBA6 ubiquitin-like modifier activating enzyme 6 0.036395
LOC112694756 uncharaterized LOC112694756 0.0362011
CD44 CD44 molecule (Indian blood group) 0.0358999
ZNF148 zinc finger protein 148 0.035552
AKAP9 A kinase (PRKA) anchor protein 9 0.0347504
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0345062
RB1CC1 RB1-inducible coiled-coil 1 0.0331531
NF1 neurofibromin 1 0.0330958
FKBP1A FK506 binding protein 1A, 12kDa 0.0324375
WDPCP WD repeat containing planar cell polarity effector 0.0321574
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0321271
WAC WW domain containing adaptor with coiled-coil 0.0320246
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0318134
RLIM ring finger protein, LIM domain interacting 0.0313294
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0307007
ACTN4 actinin, alpha 4 0.0304166
ESYT2 extended synaptotagmin-like protein 2 0.0300968
DIAPH3 diaphanous-related formin 3 0.0298077
ANKRD28 ankyrin repeat domain 28 0.0293093
BIRC6 baculoviral IAP repeat containing 6 0.0292615
DOCK5 dedicator of cytokinesis 5 0.0291176
DLG1 discs, large homolog 1 (Drosophila) 0.0290302
BRWD3 bromodomain and WD repeat domain containing 3 0.0288085
CENPE centromere protein E, 312kDa 0.0285937
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0285678
GSK3B glycogen synthase kinase 3 beta 0.0283258
NRIP1 nuclear receptor interacting protein 1 0.0282847
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0281982
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0280703
SMC4 structural maintenance of chromosomes 4 0.0278762
NUP58 nucleoporin 58 0.0277544
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0277213
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 0.0273238
CDCP1 CUB domain containing protein 1 0.0272645
RAB6A RAB6A, member RAS oncogene family 0.0271944
XPO1 exportin 1 0.0267896
ZFC3H1 zinc finger, C3H1-type containing 0.0264988
FLNB filamin B, beta 0.0263313
SPRED1 sprouty-related, EVH1 domain containing 1 0.0263227
NGLY1 N-glycanase 1 0.0262465
OGA O-GlcNAcase 0.0261568
CHSY1 chondroitin sulfate synthase 1 0.0261106
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0260633
RNF145 ring finger protein 145 0.0256916
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0256469
AVL9 AVL9 homolog (S. cerevisiase) 0.0255744
EEF2 eukaryotic translation elongation factor 2 0.0251092
KDM3A lysine (K)-specific demethylase 3A 0.0248509
TMF1 TATA element modulatory factor 1 0.0247818
COPA coatomer protein complex, subunit alpha 0.0246931
COG5 component of oligomeric golgi complex 5 0.0246472
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0244237
HM13 histocompatibility (minor) 13 0.0243723
CKAP2 cytoskeleton associated protein 2 0.0243456
SRP54 signal recognition particle 54kDa 0.0242486
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0241835
TPX2 TPX2, microtubule-associated 0.0239429
OSMR oncostatin M receptor 0.0239269
SRRM2 serine/arginine repetitive matrix 2 0.0239261
TFG TRK-fused gene 0.0238817
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0238435
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0237864
ATP13A3 ATPase type 13A3 0.023692
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0236847
ECT2 epithelial cell transforming 2 0.0236073
GPSM2 G-protein signaling modulator 2 0.0234346
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0234255
KIF4A kinesin family member 4A 0.023396
MEF2A myocyte enhancer factor 2A 0.0231296
YEATS2 YEATS domain containing 2 0.0230106
ANKRD17 ankyrin repeat domain 17 0.0227822
TPD52 tumor protein D52 0.0226687
LCORL ligand dependent nuclear receptor corepressor-like 0.0226673
CSNK1A1 casein kinase 1, alpha 1 0.0226432
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0226289
USP9X ubiquitin specific peptidase 9, X-linked 0.0223932
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0223899
CDK19 cyclin-dependent kinase 19 0.0223649
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0222799
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0222596

decreased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.164175
CDH13 cadherin 13 -0.121289
COL1A1 collagen, type I, alpha 1 -0.117695
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0877891
HLA-B major histocompatibility complex, class I, B -0.0866239
AKAP12 A kinase (PRKA) anchor protein 12 -0.0859594
COL6A2 collagen, type VI, alpha 2 -0.0729277
COL6A1 collagen, type VI, alpha 1 -0.0722604
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0717317
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0712334
TGFBI transforming growth factor, beta-induced, 68kDa -0.066472
PTPRG protein tyrosine phosphatase, receptor type, G -0.0648715
SP100 SP100 nuclear antigen -0.0644872
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.064099
EGR1 early growth response 1 -0.0629696
FHIT fragile histidine triad -0.062218
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0610426
COL1A2 collagen, type I, alpha 2 -0.0604679
MT2A metallothionein 2A -0.0600685
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0562121
ZBTB38 zinc finger and BTB domain containing 38 -0.0543381
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0541021
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0537037
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0500362
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0484856
GLIS3 GLIS family zinc finger 3 -0.0468411
IER3 immediate early response 3 -0.0464021
TMSB10 thymosin beta 10 -0.046225
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0448876
SLIT2 slit homolog 2 (Drosophila) -0.0443306
HDAC9 histone deacetylase 9 -0.0425538
FN1 fibronectin 1 -0.042118
IL1B interleukin 1, beta -0.0419887
TNS3 tensin 3 -0.0415888
CADM1 cell adhesion molecule 1 -0.0411757
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0408012
TENT5A terminal nucleotidyltransferase 5A -0.040194
NAV1 neuron navigator 1 -0.0398358
COL5A1 collagen, type V, alpha 1 -0.0398145
APCDD1L adenomatosis polyposis coli down-regulated 1-like -0.0393267
RND3 Rho family GTPase 3 -0.0389178
RAB7A RAB7A, member RAS oncogene family -0.0388395
LPP LIM domain containing preferred translocation partner in lipoma -0.0382951
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0381818
RAI14 retinoic acid induced 14 -0.0380063
IRAK3 interleukin-1 receptor-associated kinase 3 -0.0374185
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0368798
AHNAK AHNAK nucleoprotein -0.0368454
HLA-A major histocompatibility complex, class I, A -0.0362469
ZMYND8 zinc finger, MYND-type containing 8 -0.0356565
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0352068
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0344622
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0340257
FRMD4A FERM domain containing 4A -0.0340047
EGFR epidermal growth factor receptor -0.0337383
SH3RF3 SH3 domain containing ring finger 3 -0.03342
JUN jun proto-oncogene -0.0330881
SOD2 superoxide dismutase 2, mitochondrial -0.0329127
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0324102
ANXA2 annexin A2 -0.0316396
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.031615
PDIA3 protein disulfide isomerase family A, member 3 -0.0308091
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0304779
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) -0.0302975
HMGA2 high mobility group AT-hook 2 -0.0299832
INHBA inhibin, beta A -0.0299472
MAML2 mastermind-like 2 (Drosophila) -0.0297988
GRB10 growth factor receptor-bound protein 10 -0.0297883
TGFB1 transforming growth factor, beta 1 -0.0297263
ZEB1 zinc finger E-box binding homeobox 1 -0.0296767
MCL1 myeloid cell leukemia 1 -0.0291398
COL4A1 collagen, type IV, alpha 1 -0.0287731
MTSS1 metastasis suppressor 1 -0.0286894
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0284128
CA12 carbonic anhydrase XII -0.0283641
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.028246
SQSTM1 sequestosome 1 -0.02823
TMEM178B transmembrane protein 178B -0.0282223
ZHX2 zinc fingers and homeoboxes 2 -0.0280843
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0278143
PSD3 pleckstrin and Sec7 domain containing 3 -0.0278057
LOXL2 lysyl oxidase-like 2 -0.0276895
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0275974
INTS6 integrator complex subunit 6 -0.0275713
RIGI RNA sensor RIG-I -0.0273293
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.027249
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0268156
EML5 echinoderm microtubule associated protein like 5 -0.0266501
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0265015
TNNC1 troponin C type 1 (slow) -0.0264173
COL7A1 collagen, type VII, alpha 1 -0.0262735
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0258074
TWIST2 twist family bHLH transcription factor 2 -0.0253903
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit -0.0250929
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0249804
ADM adrenomedullin -0.0248704
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0246567
SAMD9 sterile alpha motif domain containing 9 -0.0246355
CUX1 cut-like homeobox 1 -0.0246115
FBXO32 F-box protein 32 -0.024448