Clobetasol propionate_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clobetasol propionate perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clobetasol propionate_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MEST mesoderm specific transcript 0.663699
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0820521
PABPC1 poly(A) binding protein, cytoplasmic 1 0.05704
MEOX2 mesenchyme homeobox 2 0.0455101
SSBP2 single-stranded DNA binding protein 2 0.043119
CALR calreticulin 0.0410555
RANBP17 RAN binding protein 17 0.0404643
SFPQ splicing factor proline/glutamine-rich 0.0385798
RNF145 ring finger protein 145 0.0374696
MKI67 marker of proliferation Ki-67 0.0371668
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0371537
FCHSD2 FCH and double SH3 domains 2 0.0367496
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0361224
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0342814
EGFR epidermal growth factor receptor 0.0340596
MATR3 matrin 3 0.0337081
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.03328
RBM39 RNA binding motif protein 39 0.0326337
HOXA3 homeobox A3 0.0318969
BOC BOC cell adhesion associated, oncogene regulated 0.0308915
TOP2B topoisomerase (DNA) II beta 180kDa 0.0296528
KDM6A lysine (K)-specific demethylase 6A 0.0290056
UTRN utrophin 0.0285028
PRKN parkin RBR E3 ubiquitin protein ligase 0.0276674
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0274323
PCBP2 poly(rC) binding protein 2 0.0272824
SMC1A structural maintenance of chromosomes 1A 0.0252774
RAD51B RAD51 paralog B 0.0247096
PCDH7 protocadherin 7 0.0245867
XPO1 exportin 1 0.0245369
ELOVL5 ELOVL fatty acid elongase 5 0.0242076
ZNF292 zinc finger protein 292 0.0241535
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0240749
OGA O-GlcNAcase 0.0240103
PELI1 pellino E3 ubiquitin protein ligase 1 0.0239084
DIAPH3 diaphanous-related formin 3 0.0238012
GOLM2 golgi membrane protein 2 0.0236102
TRA2B transformer 2 beta homolog (Drosophila) 0.0232353
FAM120B family with sequence similarity 120B 0.0228734
CHD1 chromodomain helicase DNA binding protein 1 0.0227902
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 0.0227186
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0225935
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0223826
DSCAM Down syndrome cell adhesion molecule 0.0223574
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0223537
YBX1 Y box binding protein 1 0.0218876
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0217803
GSE1 Gse1 coiled-coil protein 0.0217642
CBX5 chromobox homolog 5 0.0216027
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0215889
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0214108
ACSL3 acyl-CoA synthetase long-chain family member 3 0.021287
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0212215
ARL15 ADP-ribosylation factor-like 15 0.0211975
PTEN phosphatase and tensin homolog 0.0211291
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0206985
AKAP9 A kinase (PRKA) anchor protein 9 0.0206698
PTK2 protein tyrosine kinase 2 0.0206537
NIPBL Nipped-B homolog (Drosophila) 0.0204685
TRIP12 thyroid hormone receptor interactor 12 0.0204472
TCERG1 transcription elongation regulator 1 0.0203108
SUCO SUN domain containing ossification factor 0.0202592
ZNF608 zinc finger protein 608 0.0202427
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.0201843
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 0.0199672
ITGAV integrin, alpha V 0.0198996
VWA8 von Willebrand factor A domain containing 8 0.0197596
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.019729
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.019709
FGFR2 fibroblast growth factor receptor 2 0.0197001
KIF11 kinesin family member 11 0.0196763
PDIA3 protein disulfide isomerase family A, member 3 0.0195873
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0194576
WDFY3 WD repeat and FYVE domain containing 3 0.0193931
RAD21 RAD21 homolog (S. pombe) 0.0193648
GSK3B glycogen synthase kinase 3 beta 0.0193177
KMT2A lysine (K)-specific methyltransferase 2A 0.0191667
BLTP1 bridge-like lipid transfer protein family member 1 0.0190992
ZNF148 zinc finger protein 148 0.0189721
CAMTA1 calmodulin binding transcription activator 1 0.0188722
TBC1D12 TBC1 domain family, member 12 0.0188531
NCKAP1 NCK-associated protein 1 0.0188015
TXNRD1 thioredoxin reductase 1 0.018764
SON SON DNA binding protein 0.0186273
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0185284
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0184131
APLP2 amyloid beta (A4) precursor-like protein 2 0.0180505
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0180485
UBE3A ubiquitin protein ligase E3A 0.0180056
CD2AP CD2-associated protein 0.0179727
SCAF4 SR-related CTD-associated factor 4 0.0178676
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 0.0176994
DOCK3 dedicator of cytokinesis 3 0.0176899
RYBP RING1 and YY1 binding protein 0.0174206
APP amyloid beta (A4) precursor protein 0.017405
CEP192 centrosomal protein 192kDa 0.0173352
WDR43 WD repeat domain 43 0.0172731
TBC1D5 TBC1 domain family, member 5 0.0172674
DMXL1 Dmx-like 1 0.0172287
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.0171508

decreased expression

Symbol Name Standardized Value
PRKG1 protein kinase, cGMP-dependent, type I -0.199739
VIM vimentin -0.115445
SOX4 SRY (sex determining region Y)-box 4 -0.100056
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0956594
CADM2 cell adhesion molecule 2 -0.0913576
MGP matrix Gla protein -0.0904734
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0892922
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0837312
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0702077
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0639838
FNDC3B fibronectin type III domain containing 3B -0.060895
IER3 immediate early response 3 -0.0599771
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0582294
TRIO trio Rho guanine nucleotide exchange factor -0.0558882
ACTG1 actin gamma 1 -0.0547861
PTMA prothymosin, alpha -0.0534644
WSB1 WD repeat and SOCS box containing 1 -0.0498559
MYOF myoferlin -0.0474145
TMSB10 thymosin beta 10 -0.0441187
HMGA2 high mobility group AT-hook 2 -0.0433255
FGFR1 fibroblast growth factor receptor 1 -0.0432294
MAP1B microtubule-associated protein 1B -0.043027
RPS24 ribosomal protein S24 -0.0429306
ZFHX3 zinc finger homeobox 3 -0.0418493
RPL34 ribosomal protein L34 -0.0411686
RPLP1 ribosomal protein, large, P1 -0.0380365
ENO1 enolase 1, (alpha) -0.0369132
SEPTIN11 septin 11 -0.0368941
GTF2IRD1 GTF2I repeat domain containing 1 -0.0357458
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0342922
ANO6 anoctamin 6 -0.0341401
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0333942
RPS8 ribosomal protein S8 -0.033148
TSHZ2 teashirt zinc finger homeobox 2 -0.0329638
TET1 tet methylcytosine dioxygenase 1 -0.0323557
LDHA lactate dehydrogenase A -0.0317171
FLNB filamin B, beta -0.0317042
MICU1 mitochondrial calcium uptake 1 -0.0298256
RSU1 Ras suppressor protein 1 -0.0297777
HMGA1 high mobility group AT-hook 1 -0.028995
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0289588
RPLP2 ribosomal protein, large, P2 -0.0288244
TUBB tubulin, beta class I -0.0286924
CUX1 cut-like homeobox 1 -0.0284233
LPP LIM domain containing preferred translocation partner in lipoma -0.0284001
MXI1 MAX interactor 1, dimerization protein -0.0283215
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0281268
RACK1 receptor for activated C kinase 1 -0.0275173
MAML3 mastermind-like 3 (Drosophila) -0.0271252
RPL19 ribosomal protein L19 -0.0268466
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.0264776
RAI1 retinoic acid induced 1 -0.0264063
JMJD1C jumonji domain containing 1C -0.026327
TPT1 tumor protein, translationally-controlled 1 -0.0262301
NDRG1 N-myc downstream regulated 1 -0.0260327
RPL28 ribosomal protein L28 -0.0257861
TULP4 tubby like protein 4 -0.0257228
PKM pyruvate kinase, muscle -0.0257026
RPL35A ribosomal protein L35a -0.0256927
SAMD4A sterile alpha motif domain containing 4A -0.0245762
BCOR BCL6 corepressor -0.0243736
PLS3 plastin 3 -0.0241962
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0238409
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0236084
RPS25 ribosomal protein S25 -0.0229285
CDK6 cyclin-dependent kinase 6 -0.0228829
MTUS1 microtubule associated tumor suppressor 1 -0.0228079
RPL30 ribosomal protein L30 -0.0222239
FRMD6 FERM domain containing 6 -0.0221612
RPL37 ribosomal protein L37 -0.0221578
KDM5B lysine (K)-specific demethylase 5B -0.0219981
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0219051
RPS23 ribosomal protein S23 -0.0218246
FOXC1 forkhead box C1 -0.0216747
ZMYND8 zinc finger, MYND-type containing 8 -0.0216086
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0216014
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0214185
AFF4 AF4/FMR2 family, member 4 -0.0213077
MMP16 matrix metallopeptidase 16 (membrane-inserted) -0.0212692
LOXL2 lysyl oxidase-like 2 -0.0211079
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.021072
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.020686
RPS6 ribosomal protein S6 -0.0206777
RPS13 ribosomal protein S13 -0.0206446
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0205762
RPS19 ribosomal protein S19 -0.0205739
RPS2 ribosomal protein S2 -0.0204423
RPS11 ribosomal protein S11 -0.0204168
TPI1 triosephosphate isomerase 1 -0.020231
RPL31 ribosomal protein L31 -0.0201839
RPL7A ribosomal protein L7a -0.0195784
TPM4 tropomyosin 4 -0.01937
RSL1D1 ribosomal L1 domain containing 1 -0.0189977
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0189791
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0188524
RPS27A ribosomal protein S27a -0.0187137
RPS3 ribosomal protein S3 -0.0186715
CREM cAMP responsive element modulator -0.0186461
TRIM9 tripartite motif containing 9 -0.0184883
NHSL1 NHS-like 1 -0.0182093