Clobetasol propionate_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clobetasol propionate perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clobetasol propionate_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.145232
EFNA5 ephrin-A5 0.130726
TRIO trio Rho guanine nucleotide exchange factor 0.102809
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.101769
AHNAK AHNAK nucleoprotein 0.0871312
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0817985
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0756837
BIRC3 baculoviral IAP repeat containing 3 0.0740881
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0715965
ALCAM activated leukocyte cell adhesion molecule 0.0668079
AKAP13 A kinase (PRKA) anchor protein 13 0.066079
IRAK3 interleukin-1 receptor-associated kinase 3 0.0613069
BICC1 BicC family RNA binding protein 1 0.0580992
FKBP5 FK506 binding protein 5 0.0555616
KMT2C lysine (K)-specific methyltransferase 2C 0.0530942
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0527883
ESYT2 extended synaptotagmin-like protein 2 0.0526981
FAT1 FAT atypical cadherin 1 0.0518678
SSBP2 single-stranded DNA binding protein 2 0.0506434
NRG1 neuregulin 1 0.0496956
ERRFI1 ERBB receptor feedback inhibitor 1 0.0491003
RASAL2 RAS protein activator like 2 0.0489268
LMO7 LIM domain 7 0.0473242
PHF3 PHD finger protein 3 0.0464657
GCLC glutamate-cysteine ligase, catalytic subunit 0.045059
SPAG9 sperm associated antigen 9 0.044858
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0444941
EHBP1 EH domain binding protein 1 0.0441497
APP amyloid beta (A4) precursor protein 0.0437218
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0437004
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0430627
LOX lysyl oxidase 0.0421003
CCNY cyclin Y 0.0419987
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.041344
HOMER2 homer scaffolding protein 2 0.0407772
NPAS2 neuronal PAS domain protein 2 0.0405559
TOP1 topoisomerase (DNA) I 0.0404771
STRN3 striatin, calmodulin binding protein 3 0.03897
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0387471
SAMD4A sterile alpha motif domain containing 4A 0.0386269
FLNB filamin B, beta 0.0385042
THSD4 thrombospondin, type I, domain containing 4 0.0384696
RBM39 RNA binding motif protein 39 0.038148
BCL2L1 BCL2-like 1 0.0376922
CLTC clathrin, heavy chain (Hc) 0.0375314
LPP LIM domain containing preferred translocation partner in lipoma 0.0373044
FGD4 FYVE, RhoGEF and PH domain containing 4 0.0371048
TJP1 tight junction protein 1 0.0370851
PDE4D phosphodiesterase 4D, cAMP-specific 0.0370157
KIF13B kinesin family member 13B 0.036922
BIRC6 baculoviral IAP repeat containing 6 0.0359634
RAD51B RAD51 paralog B 0.0355208
FTH1 ferritin, heavy polypeptide 1 0.0354968
ANKRD11 ankyrin repeat domain 11 0.0344144
MCU mitochondrial calcium uniporter 0.0344137
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0342968
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0341968
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.034029
BCAR3 breast cancer anti-estrogen resistance 3 0.033741
AHNAK2 AHNAK nucleoprotein 2 0.0336429
RCOR1 REST corepressor 1 0.0334922
DOCK5 dedicator of cytokinesis 5 0.0334421
DPYD dihydropyrimidine dehydrogenase 0.033277
SEC31A SEC31 homolog A (S. cerevisiae) 0.0328034
MACF1 microtubule-actin crosslinking factor 1 0.0321746
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0321729
TTC3 tetratricopeptide repeat domain 3 0.0321709
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0317796
HELZ helicase with zinc finger 0.0314248
FNDC3B fibronectin type III domain containing 3B 0.030767
ZFAND3 zinc finger, AN1-type domain 3 0.0306777
RPRD1B regulation of nuclear pre-mRNA domain containing 1B 0.0303531
YAP1 Yes-associated protein 1 0.0301577
PICALM phosphatidylinositol binding clathrin assembly protein 0.0300352
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0299448
PRKCA protein kinase C, alpha 0.0297207
MON2 MON2 homolog (S. cerevisiae) 0.0296882
ERBIN erbb2 interacting protein 0.0295192
MYO9A myosin IXA 0.0293851
PYGB phosphorylase, glycogen; brain 0.0293275
ARHGAP5 Rho GTPase activating protein 5 0.0288899
GOLGB1 golgin B1 0.0288215
ZSWIM6 zinc finger, SWIM-type containing 6 0.0286891
FNIP1 folliculin interacting protein 1 0.0285634
DSCAM Down syndrome cell adhesion molecule 0.0284914
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0284767
TRIP12 thyroid hormone receptor interactor 12 0.0279898
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0278226
MAP2K1 mitogen-activated protein kinase kinase 1 0.0274616
CLIC4 chloride intracellular channel 4 0.0272954
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0272046
CEP70 centrosomal protein 70kDa 0.0271899
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0270628
COPA coatomer protein complex, subunit alpha 0.0270372
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0270262
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.026937
SHROOM3 shroom family member 3 0.0269007
EGFR epidermal growth factor receptor 0.0268627
NRIP1 nuclear receptor interacting protein 1 0.0267892
SCFD1 sec1 family domain containing 1 0.0266625

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.206161
PTMA prothymosin, alpha -0.161104
TMSB10 thymosin beta 10 -0.137062
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.126779
MT2A metallothionein 2A -0.103321
NDRG1 N-myc downstream regulated 1 -0.0942603
FTL ferritin, light polypeptide -0.0904156
HLA-B major histocompatibility complex, class I, B -0.0886126
B2M beta-2-microglobulin -0.0830254
RPLP1 ribosomal protein, large, P1 -0.0755676
C15ORF48 chromosome 15 open reading frame 48 -0.0735889
ISG15 ISG15 ubiquitin-like modifier -0.0724325
TPT1 tumor protein, translationally-controlled 1 -0.0718111
PLAU plasminogen activator, urokinase -0.0690524
HMGA1 high mobility group AT-hook 1 -0.0651531
KRT19 keratin 19, type I -0.0637875
RPS8 ribosomal protein S8 -0.059798
RPL23 ribosomal protein L23 -0.0595342
RPL35A ribosomal protein L35a -0.0585415
VIM vimentin -0.0580428
RPL19 ribosomal protein L19 -0.0565484
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0560266
ACTG1 actin gamma 1 -0.0513155
RPS6 ribosomal protein S6 -0.0495731
EIF1 eukaryotic translation initiation factor 1 -0.0487292
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0482284
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0462221
PLAUR plasminogen activator, urokinase receptor -0.0459736
MT1X metallothionein 1X -0.0458528
RPS19 ribosomal protein S19 -0.0455266
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0450436
IFI27 interferon, alpha-inducible protein 27 -0.0443246
LOC112694756 uncharaterized LOC112694756 -0.0427841
TMSB4X thymosin beta 4, X-linked -0.0415252
IER3 immediate early response 3 -0.0412032
IGFBP3 insulin-like growth factor binding protein 3 -0.0407556
SLC38A1 solute carrier family 38, member 1 -0.0397507
NAMPT nicotinamide phosphoribosyltransferase -0.0396934
RPS29 ribosomal protein S29 -0.0393713
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0392412
LCN2 lipocalin 2 -0.0366638
RPS23 ribosomal protein S23 -0.0349638
ARHGAP26 Rho GTPase activating protein 26 -0.034663
RPS21 ribosomal protein S21 -0.0338745
RPLP0 ribosomal protein, large, P0 -0.0337691
RPS27A ribosomal protein S27a -0.0337544
RPL34 ribosomal protein L34 -0.0332102
CSTB cystatin B (stefin B) -0.0331684
RPL9 ribosomal protein L9 -0.0331586
S100A6 S100 calcium binding protein A6 -0.0330741
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0330682
RPS24 ribosomal protein S24 -0.0327366
RPS3 ribosomal protein S3 -0.0326963
APOL1 apolipoprotein L, 1 -0.0322937
RPL37A ribosomal protein L37a -0.0322855
RPL11 ribosomal protein L11 -0.0322635
RACK1 receptor for activated C kinase 1 -0.0319662
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0317708
DDIT4 DNA-damage-inducible transcript 4 -0.031758
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0315914
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0315404
TM4SF1 transmembrane 4 L six family member 1 -0.0313435
POTEF POTE ankyrin domain family, member F -0.0310451
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0309282
ZFP36L1 ZFP36 ring finger protein-like 1 -0.030823
RPL31 ribosomal protein L31 -0.0298796
FAM162A family with sequence similarity 162, member A -0.0290777
CD47 CD47 molecule -0.0290538
SMAD3 SMAD family member 3 -0.0289979
IFI16 interferon, gamma-inducible protein 16 -0.0289842
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0289836
CDCP1 CUB domain containing protein 1 -0.0287862
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0287679
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0286006
RPS14 ribosomal protein S14 -0.0285164
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0284844
RPS25 ribosomal protein S25 -0.0282762
RPLP2 ribosomal protein, large, P2 -0.0280514
RPS27 ribosomal protein S27 -0.0280087
LAMC2 laminin, gamma 2 -0.027354
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0271688
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0260813
MMP7 matrix metallopeptidase 7 -0.0260193
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.025315
RPL28 ribosomal protein L28 -0.0251608
KIAA1217 KIAA1217 -0.0249989
IFITM1 interferon induced transmembrane protein 1 -0.0249056
RPL5 ribosomal protein L5 -0.0248619
S100A10 S100 calcium binding protein A10 -0.0241166
CD44 CD44 molecule (Indian blood group) -0.0239018
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0237668
RPS12 ribosomal protein S12 -0.0235085
HLA-E major histocompatibility complex, class I, E -0.0233483
ENO1 enolase 1, (alpha) -0.0231631
HLA-A major histocompatibility complex, class I, A -0.0231627
FOSL1 FOS-like antigen 1 -0.0231496
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0230747
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0229309
PKM pyruvate kinase, muscle -0.0229036
MX2 MX dynamin-like GTPase 2 -0.022717