Clobetasol propionate_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clobetasol propionate perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clobetasol propionate_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.281562
FKBP5 FK506 binding protein 5 0.127568
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.121612
MT2A metallothionein 2A 0.117403
LOX lysyl oxidase 0.115093
SH3RF3 SH3 domain containing ring finger 3 0.111298
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.10924
ABLIM3 actin binding LIM protein family, member 3 0.104123
PCBP3 poly(rC) binding protein 3 0.0987551
FNDC3B fibronectin type III domain containing 3B 0.098001
AKAP12 A kinase (PRKA) anchor protein 12 0.0977895
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0881759
SOD2 superoxide dismutase 2, mitochondrial 0.0834922
AHNAK AHNAK nucleoprotein 0.0794383
ZMYND8 zinc finger, MYND-type containing 8 0.0691554
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0679269
ESYT2 extended synaptotagmin-like protein 2 0.0677838
FTH1 ferritin, heavy polypeptide 1 0.0673801
ALCAM activated leukocyte cell adhesion molecule 0.0644175
MYOF myoferlin 0.0631393
PID1 phosphotyrosine interaction domain containing 1 0.0629272
AKAP13 A kinase (PRKA) anchor protein 13 0.0569022
DNER delta/notch-like EGF repeat containing 0.055027
FAM13A family with sequence similarity 13, member A 0.0534977
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0489673
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0486922
ANKRD28 ankyrin repeat domain 28 0.0475534
LDHA lactate dehydrogenase A 0.0467998
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0444834
MT1X metallothionein 1X 0.0434712
TSC22D3 TSC22 domain family, member 3 0.0434091
MT1E metallothionein 1E 0.0433159
CD109 CD109 molecule 0.0417342
SDK1 sidekick cell adhesion molecule 1 0.0406049
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0394456
HIPK2 homeodomain interacting protein kinase 2 0.0393704
SSBP2 single-stranded DNA binding protein 2 0.038994
ERRFI1 ERBB receptor feedback inhibitor 1 0.0387791
PCNX1 pecanex 1 0.0382842
TNS3 tensin 3 0.0372799
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0372157
LPP LIM domain containing preferred translocation partner in lipoma 0.0369635
RNF220 ring finger protein 220 0.0368141
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma 0.0361443
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0361357
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0344172
PTPRG protein tyrosine phosphatase, receptor type, G 0.0334601
ZBTB38 zinc finger and BTB domain containing 38 0.0326803
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.031814
LDLRAD3 low density lipoprotein receptor class A domain containing 3 0.0317159
IRS2 insulin receptor substrate 2 0.031594
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.0314329
TMX4 thioredoxin-related transmembrane protein 4 0.0300552
PTPRM protein tyrosine phosphatase, receptor type, M 0.0299275
IRAK3 interleukin-1 receptor-associated kinase 3 0.0297252
FGD4 FYVE, RhoGEF and PH domain containing 4 0.0294886
TRAM2 translocation associated membrane protein 2 0.0294094
EFNA5 ephrin-A5 0.0292491
EPAS1 endothelial PAS domain protein 1 0.0288462
JAK1 Janus kinase 1 0.028412
MED13L mediator complex subunit 13-like 0.0281291
PRKCE protein kinase C, epsilon 0.0280168
RUNX1 runt-related transcription factor 1 0.0279873
ACSL1 acyl-CoA synthetase long-chain family member 1 0.0275303
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0274723
PHF21A PHD finger protein 21A 0.0269621
LTBP1 latent transforming growth factor beta binding protein 1 0.025639
SLTM SAFB-like, transcription modulator 0.0249158
CCND3 cyclin D3 0.0244308
BIRC3 baculoviral IAP repeat containing 3 0.0244167
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.0242412
GOLGA4 golgin A4 0.0241608
LAMB1 laminin, beta 1 0.0235678
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0233197
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0232906
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0232815
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0229782
BCL2L1 BCL2-like 1 0.0229212
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0226095
JCAD junctional cadherin 5 associated 0.0224995
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.0223532
ANGPTL4 angiopoietin-like 4 0.0222353
CUL4B cullin 4B 0.0221837
SETD5 SET domain containing 5 0.0219483
GPC6 glypican 6 0.0219168
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0217696
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0210794
PHKB phosphorylase kinase, beta 0.0208546
EPS8 epidermal growth factor receptor pathway substrate 8 0.0206113
METTL15 methyltransferase like 15 0.0205425
PRELID2 PRELI domain containing 2 0.0204757
MAPK14 mitogen-activated protein kinase 14 0.0204552
ARMC8 armadillo repeat containing 8 0.0203858
HIP1 huntingtin interacting protein 1 0.0201872
COL6A3 collagen, type VI, alpha 3 0.0200459
CANX calnexin 0.0200231
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0199937
JPH2 junctophilin 2 0.019967
DENND3 DENN/MADD domain containing 3 0.0198062
RPL7 ribosomal protein L7 0.0197792

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.240353
CD44 CD44 molecule (Indian blood group) -0.165341
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.160207
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.152783
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.145037
EXT1 exostosin glycosyltransferase 1 -0.140768
TRIO trio Rho guanine nucleotide exchange factor -0.134998
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.131061
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.119703
NDRG1 N-myc downstream regulated 1 -0.09095
CDH13 cadherin 13 -0.0907565
PDE10A phosphodiesterase 10A -0.0865423
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0842938
STC1 stanniocalcin 1 -0.0822446
ELL2 elongation factor, RNA polymerase II, 2 -0.0771658
IGFBP3 insulin-like growth factor binding protein 3 -0.0768696
CDCP1 CUB domain containing protein 1 -0.0730608
COL6A2 collagen, type VI, alpha 2 -0.0707849
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0619972
JARID2 jumonji, AT rich interactive domain 2 -0.0566791
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0563393
PTMA prothymosin, alpha -0.0541727
COL5A1 collagen, type V, alpha 1 -0.0541393
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0527091
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0502532
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0485328
DTNA dystrobrevin, alpha -0.0479237
NAV1 neuron navigator 1 -0.046826
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0466968
IGF2 insulin-like growth factor 2 -0.0463172
EGR1 early growth response 1 -0.0456493
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.045486
TM4SF1 transmembrane 4 L six family member 1 -0.0444945
COL6A1 collagen, type VI, alpha 1 -0.0443984
CCND1 cyclin D1 -0.044283
LAMB3 laminin, beta 3 -0.0424208
MYO10 myosin X -0.0401396
INHBA inhibin, beta A -0.0397454
SMAD3 SMAD family member 3 -0.0393403
ACTN4 actinin, alpha 4 -0.0379018
RASA3 RAS p21 protein activator 3 -0.0359457
TENM2 teneurin transmembrane protein 2 -0.0346804
ANTXR2 anthrax toxin receptor 2 -0.0343727
AFF3 AF4/FMR2 family, member 3 -0.0336365
IL1B interleukin 1, beta -0.0331646
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0330365
MAP1B microtubule-associated protein 1B -0.0328498
GRB10 growth factor receptor-bound protein 10 -0.032575
RAI14 retinoic acid induced 14 -0.0318262
LOXL2 lysyl oxidase-like 2 -0.0314464
IGF1R insulin-like growth factor 1 receptor -0.0314452
TUBB6 tubulin, beta 6 class V -0.031156
NGLY1 N-glycanase 1 -0.0309669
ACTG1 actin gamma 1 -0.030299
TNNC1 troponin C type 1 (slow) -0.0297256
COL7A1 collagen, type VII, alpha 1 -0.0287971
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0285632
SHB Src homology 2 domain containing adaptor protein B -0.0285067
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0282647
CFAP20DC CFAP20 domain containing -0.0279424
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0278074
PPARD peroxisome proliferator-activated receptor delta -0.0276498
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0275989
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0273764
IER3 immediate early response 3 -0.0269816
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0266676
CADM1 cell adhesion molecule 1 -0.0265414
VEGFC vascular endothelial growth factor C -0.0265371
PLAUR plasminogen activator, urokinase receptor -0.0264334
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.026053
DLG1 discs, large homolog 1 (Drosophila) -0.0259916
BHLHE40 basic helix-loop-helix family, member e40 -0.0257295
GLIS3 GLIS family zinc finger 3 -0.0252259
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0250497
RNF24 ring finger protein 24 -0.0248329
IL11 interleukin 11 -0.0245574
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0238372
MRPS6 mitochondrial ribosomal protein S6 -0.0228699
GNAS GNAS complex locus -0.0221252
BTG1 B-cell translocation gene 1, anti-proliferative -0.0216872
SAMD4A sterile alpha motif domain containing 4A -0.021638
SYNJ2 synaptojanin 2 -0.0214204
CAPN2 calpain 2, (m/II) large subunit -0.0213249
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0212903
VEGFA vascular endothelial growth factor A -0.021271
LOC112694756 uncharaterized LOC112694756 -0.0207998
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 -0.0207738
RAP1B RAP1B, member of RAS oncogene family -0.0206311
AXL AXL receptor tyrosine kinase -0.0203578
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0201221
NALF1 NALCN channel auxiliary factor 1 -0.0200567
LAMA4 laminin, alpha 4 -0.0199374
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0198156
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0197944
MYO9B myosin IXB -0.019791
JUN jun proto-oncogene -0.0194744
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0193085
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B -0.0186779
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0185911
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0185474