Clobetasol propionate_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clobetasol propionate perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clobetasol propionate_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DLG1 discs, large homolog 1 (Drosophila) 0.128354
MT2A metallothionein 2A 0.116869
TOP1 topoisomerase (DNA) I 0.11567
AHNAK AHNAK nucleoprotein 0.0938947
MT1X metallothionein 1X 0.0921167
MT1E metallothionein 1E 0.0905427
FKBP5 FK506 binding protein 5 0.0622712
CANX calnexin 0.0534986
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0534717
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0518783
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0440655
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0424263
ZMYND8 zinc finger, MYND-type containing 8 0.0389852
ZBTB38 zinc finger and BTB domain containing 38 0.038488
TMSB4X thymosin beta 4, X-linked 0.0364589
TMEM123 transmembrane protein 123 0.0337225
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0336751
TXNIP thioredoxin interacting protein 0.0335604
EPHA4 EPH receptor A4 0.0330632
SRGN serglycin 0.0316229
DPYD dihydropyrimidine dehydrogenase 0.0314538
PGK1 phosphoglycerate kinase 1 0.0312183
EHBP1 EH domain binding protein 1 0.0298121
GARS1 glycyl-tRNA synthetase 1 0.0295967
CADM2 cell adhesion molecule 2 0.0290541
HDAC9 histone deacetylase 9 0.029013
CALR calreticulin 0.0276157
TSC22D1 TSC22 domain family, member 1 0.0275257
EXOC4 exocyst complex component 4 0.026754
CFAP299 cilia and flagella associated protein 299 0.0267127
PTPRF protein tyrosine phosphatase, receptor type, F 0.0266688
APP amyloid beta (A4) precursor protein 0.0266128
ITGB4 integrin, beta 4 0.0260125
RAD50 RAD50 homolog (S. cerevisiae) 0.0257525
ESYT2 extended synaptotagmin-like protein 2 0.0254926
TTC3 tetratricopeptide repeat domain 3 0.0254653
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0245729
LARS1 leucyl-tRNA synthetase 1 0.0237534
ANKRD28 ankyrin repeat domain 28 0.0235558
AHNAK2 AHNAK nucleoprotein 2 0.0235174
ARHGAP12 Rho GTPase activating protein 12 0.0220774
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0216244
MBNL2 muscleblind-like splicing regulator 2 0.0215151
DNER delta/notch-like EGF repeat containing 0.0210675
ZDHHC14 zinc finger, DHHC-type containing 14 0.0210529
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0207648
HDLBP high density lipoprotein binding protein 0.0207402
EGFR epidermal growth factor receptor 0.020647
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0202273
DYNC2I1 dynein 2 intermediate chain 1 0.0202132
EEF2 eukaryotic translation elongation factor 2 0.0200834
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 0.0200541
BCAS3 breast carcinoma amplified sequence 3 0.0200042
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.019862
UBE2E3 ubiquitin-conjugating enzyme E2E 3 0.0196656
ADGRG6 adhesion G protein-coupled receptor G6 0.0196443
LDHA lactate dehydrogenase A 0.0195864
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.019361
PHF14 PHD finger protein 14 0.0191177
LPP LIM domain containing preferred translocation partner in lipoma 0.0191066
TBC1D5 TBC1 domain family, member 5 0.0191047
EFNA5 ephrin-A5 0.018805
SYT1 synaptotagmin I 0.0184815
ATF7IP activating transcription factor 7 interacting protein 0.0177981
PATJ PATJ crumbs cell polarity complex component 0.017717
WDR27 WD repeat domain 27 0.0177132
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0175126
CDK6 cyclin-dependent kinase 6 0.0173749
MAT2A methionine adenosyltransferase II, alpha 0.0172792
LMAN1 lectin, mannose-binding, 1 0.0171897
THOC2 THO complex 2 0.0171462
MTCL1 microtubule crosslinking factor 1 0.0167992
ANKRD50 ankyrin repeat domain 50 0.0166311
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0164138
RSL1D1 ribosomal L1 domain containing 1 0.0163374
EPB41 erythrocyte membrane protein band 4.1 0.0162833
MDN1 MDN1, midasin homolog (yeast) 0.0162645
CD109 CD109 molecule 0.0162576
RABGAP1L RAB GTPase activating protein 1-like 0.0162084
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0159085
AARS1 alanyl-tRNA synthetase 1 0.0158959
HDAC8 histone deacetylase 8 0.0157872
THSD4 thrombospondin, type I, domain containing 4 0.015762
RIGI RNA sensor RIG-I 0.0155546
IARS1 isoleucyl-tRNA synthetase 1 0.015394
LARP1 La ribonucleoprotein domain family, member 1 0.0153523
DDIT4 DNA-damage-inducible transcript 4 0.0152975
GCLM glutamate-cysteine ligase, modifier subunit 0.015103
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0150733
KLF9 Kruppel-like factor 9 0.0149189
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0145933
ANXA2 annexin A2 0.0145296
RHBDD1 rhomboid domain containing 1 0.0144559
NSD1 nuclear receptor binding SET domain protein 1 0.0142137
SLC38A2 solute carrier family 38, member 2 0.0141068
ALDH7A1 aldehyde dehydrogenase 7 family, member A1 0.013901
BPTF bromodomain PHD finger transcription factor 0.0138852
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0138829
YARS1 tyrosyl-tRNA synthetase 1 0.0138171
DOCK11 dedicator of cytokinesis 11 0.0136615

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.250131
TM4SF1 transmembrane 4 L six family member 1 -0.178525
KMT2E lysine (K)-specific methyltransferase 2E -0.128854
POTEF POTE ankyrin domain family, member F -0.104792
ERRFI1 ERBB receptor feedback inhibitor 1 -0.10072
DST dystonin -0.0976994
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0974447
SPAG9 sperm associated antigen 9 -0.0902661
RPS2 ribosomal protein S2 -0.0892004
PTMA prothymosin, alpha -0.0822054
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.079827
TXNRD1 thioredoxin reductase 1 -0.0770521
HLA-B major histocompatibility complex, class I, B -0.0750541
PSD3 pleckstrin and Sec7 domain containing 3 -0.0698786
WWTR1 WW domain containing transcription regulator 1 -0.0684776
TPT1 tumor protein, translationally-controlled 1 -0.064252
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0640155
ADAM17 ADAM metallopeptidase domain 17 -0.0610737
CAPRIN2 caprin family member 2 -0.0599524
RPS6 ribosomal protein S6 -0.0589785
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0580188
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.054649
RTN4 reticulon 4 -0.0541917
JMJD1C jumonji domain containing 1C -0.0539551
LOXL2 lysyl oxidase-like 2 -0.0532912
USP34 ubiquitin specific peptidase 34 -0.052997
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0528909
ARHGAP5 Rho GTPase activating protein 5 -0.0508631
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0504126
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 -0.0503617
LOC112694756 uncharaterized LOC112694756 -0.0496825
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0487412
TMEM41B transmembrane protein 41B -0.0470084
VMP1 vacuole membrane protein 1 -0.0464768
RPS12 ribosomal protein S12 -0.046243
SDK1 sidekick cell adhesion molecule 1 -0.0461066
RPS19 ribosomal protein S19 -0.0458749
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0450735
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0442345
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0436828
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta -0.042987
TRIO trio Rho guanine nucleotide exchange factor -0.0424819
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.041832
RRM2 ribonucleotide reductase M2 -0.0413376
RPL37A ribosomal protein L37a -0.0410885
FMNL2 formin-like 2 -0.040877
HSPA8 heat shock 70kDa protein 8 -0.0405456
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0405019
MACF1 microtubule-actin crosslinking factor 1 -0.0401593
CDCP1 CUB domain containing protein 1 -0.0401449
PDE10A phosphodiesterase 10A -0.0398573
RPL36 ribosomal protein L36 -0.0396841
RPLP2 ribosomal protein, large, P2 -0.039115
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0384976
USP12 ubiquitin specific peptidase 12 -0.0374914
PRDX1 peroxiredoxin 1 -0.0369803
EZR ezrin -0.0368631
RCOR1 REST corepressor 1 -0.0363946
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0360757
RPL38 ribosomal protein L38 -0.0360272
FERMT1 fermitin family member 1 -0.0357134
ZEB1 zinc finger E-box binding homeobox 1 -0.0348092
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0335584
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 -0.0335204
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0333106
BRD2 bromodomain containing 2 -0.0325354
SRSF4 serine/arginine-rich splicing factor 4 -0.0325301
CMIP c-Maf inducing protein -0.032403
SEC24A SEC24 family member A -0.032279
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0321216
ZFAND3 zinc finger, AN1-type domain 3 -0.0318669
SDC4 syndecan 4 -0.0312109
RPS8 ribosomal protein S8 -0.031023
WSB1 WD repeat and SOCS box containing 1 -0.0305551
SRRM2 serine/arginine repetitive matrix 2 -0.0305491
RPL26 ribosomal protein L26 -0.0304697
CSNK1A1 casein kinase 1, alpha 1 -0.0303468
RPL28 ribosomal protein L28 -0.0300514
FBXO11 F-box protein 11 -0.029968
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0298756
ECE1 endothelin converting enzyme 1 -0.0298695
NUP58 nucleoporin 58 -0.0298508
TGM2 transglutaminase 2 -0.0295453
SMAD3 SMAD family member 3 -0.0294855
RPL37 ribosomal protein L37 -0.029397
CEP170 centrosomal protein 170kDa -0.0291214
CLTC clathrin, heavy chain (Hc) -0.0289067
GSK3B glycogen synthase kinase 3 beta -0.0286922
TPM3 tropomyosin 3 -0.0286781
RAB7A RAB7A, member RAS oncogene family -0.0282672
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase -0.0282444
YBX3 Y box binding protein 3 -0.0281748
BIRC2 baculoviral IAP repeat containing 2 -0.0281439
B2M beta-2-microglobulin -0.0278924
USP9X ubiquitin specific peptidase 9, X-linked -0.027446
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0274413
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0273694
PLAUR plasminogen activator, urokinase receptor -0.0272897
MKI67 marker of proliferation Ki-67 -0.027213
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0271507