Clobetasol propionate_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clobetasol propionate perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clobetasol propionate_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ELL2 elongation factor, RNA polymerase II, 2 0.112384
AKAP12 A kinase (PRKA) anchor protein 12 0.090764
PDE4D phosphodiesterase 4D, cAMP-specific 0.0873025
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0803621
MCL1 myeloid cell leukemia 1 0.0742621
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0735472
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.07094
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0667706
TXNRD1 thioredoxin reductase 1 0.0545499
NIPBL Nipped-B homolog (Drosophila) 0.0527143
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0523313
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0522611
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0499387
SFPQ splicing factor proline/glutamine-rich 0.0492601
RBM39 RNA binding motif protein 39 0.043755
YBX3 Y box binding protein 3 0.0425069
OGA O-GlcNAcase 0.0418245
WAC WW domain containing adaptor with coiled-coil 0.0408924
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0397397
PDE10A phosphodiesterase 10A 0.038715
ERRFI1 ERBB receptor feedback inhibitor 1 0.0360363
AEBP2 AE binding protein 2 0.0353268
ATP13A3 ATPase type 13A3 0.0347592
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0346871
HOMER1 homer scaffolding protein 1 0.0341593
WNK1 WNK lysine deficient protein kinase 1 0.0339659
MAPK8 mitogen-activated protein kinase 8 0.0329089
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0328966
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.03263
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0324706
GPHN gephyrin 0.031242
SETX senataxin 0.0309906
INTS6 integrator complex subunit 6 0.0309723
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.030629
TPM3 tropomyosin 3 0.0305806
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0303976
ZSWIM6 zinc finger, SWIM-type containing 6 0.0303326
DOCK5 dedicator of cytokinesis 5 0.030332
COPA coatomer protein complex, subunit alpha 0.0303144
JMJD1C jumonji domain containing 1C 0.0300071
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0297932
PDLIM5 PDZ and LIM domain 5 0.0293731
CUL3 cullin 3 0.0293421
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0292691
RSRC2 arginine/serine-rich coiled-coil 2 0.0291769
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0289747
SPAG9 sperm associated antigen 9 0.0289282
SLC38A2 solute carrier family 38, member 2 0.0288675
BRD2 bromodomain containing 2 0.0287689
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0285814
NCAPG2 non-SMC condensin II complex, subunit G2 0.0283386
RAB1A RAB1A, member RAS oncogene family 0.0273415
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.025469
GSK3B glycogen synthase kinase 3 beta 0.0252107
ADAM17 ADAM metallopeptidase domain 17 0.0251879
CLTC clathrin, heavy chain (Hc) 0.0250003
WWOX WW domain containing oxidoreductase 0.0249216
SNAP25 synaptosomal-associated protein, 25kDa 0.0248662
DDIT3 DNA-damage-inducible transcript 3 0.0247804
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0245895
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0242132
SPRED2 sprouty-related, EVH1 domain containing 2 0.0241389
GARS1 glycyl-tRNA synthetase 1 0.0240314
SND1 staphylococcal nuclease and tudor domain containing 1 0.0238896
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.023719
RTN4 reticulon 4 0.023647
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0233803
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.023227
ARFGEF3 ARFGEF family member 3 0.0228371
FNDC3A fibronectin type III domain containing 3A 0.0228346
PDE8A phosphodiesterase 8A 0.0228129
PRELID2 PRELI domain containing 2 0.0227224
ZZZ3 zinc finger, ZZ-type containing 3 0.0226912
BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 0.022669
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0226508
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0226097
TMEM41B transmembrane protein 41B 0.0223759
SPIRE1 spire-type actin nucleation factor 1 0.0223429
AGFG1 ArfGAP with FG repeats 1 0.0222831
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0222338
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0221679
UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 0.022117
ANXA5 annexin A5 0.0220296
XPOT exportin, tRNA 0.0219203
TOP2B topoisomerase (DNA) II beta 180kDa 0.0218769
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0217823
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 0.0215845
ATAD2 ATPase family, AAA domain containing 2 0.0215675
DCAF8 DDB1 and CUL4 associated factor 8 0.0214178
RUSC2 RUN and SH3 domain containing 2 0.0213585
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like 0.0213361
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0211925
BRD4 bromodomain containing 4 0.0210923
VCP valosin containing protein 0.0210606
CNOT4 CCR4-NOT transcription complex, subunit 4 0.0210521
DIDO1 death inducer-obliterator 1 0.0209829
EFNA5 ephrin-A5 0.0209519
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0208192
CLIC4 chloride intracellular channel 4 0.0208011
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0207575

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0899779
EML4 echinoderm microtubule associated protein like 4 -0.0790128
SMAD3 SMAD family member 3 -0.0786146
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0768267
TFPI2 tissue factor pathway inhibitor 2 -0.0603723
TPI1 triosephosphate isomerase 1 -0.0598203
EXOC4 exocyst complex component 4 -0.0573707
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0515465
BBX bobby sox homolog (Drosophila) -0.051251
WSB1 WD repeat and SOCS box containing 1 -0.0511233
NF1 neurofibromin 1 -0.0511204
CLIP1 CAP-GLY domain containing linker protein 1 -0.0500333
BASP1 brain abundant, membrane attached signal protein 1 -0.0474041
PFN1 profilin 1 -0.0465607
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0465552
MMP12 matrix metallopeptidase 12 -0.0454589
PTPRF protein tyrosine phosphatase, receptor type, F -0.0453817
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0450001
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0449514
ZBTB20 zinc finger and BTB domain containing 20 -0.0449398
NCOA7 nuclear receptor coactivator 7 -0.0446097
MYL12B myosin, light chain 12B, regulatory -0.0441487
RNF213 ring finger protein 213 -0.044134
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0432576
FTL ferritin, light polypeptide -0.0422897
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0416238
NSUN6 NOP2/Sun domain family, member 6 -0.0416232
FCHSD2 FCH and double SH3 domains 2 -0.0411306
ATXN1 ataxin 1 -0.0409634
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0406352
EGFR epidermal growth factor receptor -0.0403764
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0401597
SBNO1 strawberry notch homolog 1 (Drosophila) -0.0400139
EHBP1 EH domain binding protein 1 -0.0396358
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0383735
LATS2 large tumor suppressor kinase 2 -0.0382785
NTSR1 neurotensin receptor 1 (high affinity) -0.0375151
AFF3 AF4/FMR2 family, member 3 -0.0373696
PTMA prothymosin, alpha -0.0370376
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0370341
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0370263
RAD51B RAD51 paralog B -0.036968
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0368241
TBC1D5 TBC1 domain family, member 5 -0.0363737
RPS3 ribosomal protein S3 -0.0361798
RPL32 ribosomal protein L32 -0.0358893
WASF2 WAS protein family, member 2 -0.035851
IGF2 insulin-like growth factor 2 -0.0357957
MACF1 microtubule-actin crosslinking factor 1 -0.0356499
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0356094
ZMYND8 zinc finger, MYND-type containing 8 -0.0352621
PHF20 PHD finger protein 20 -0.035132
ANKRD28 ankyrin repeat domain 28 -0.0347002
RPS29 ribosomal protein S29 -0.0346729
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0345411
ETV6 ets variant 6 -0.0338506
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0338276
THSD4 thrombospondin, type I, domain containing 4 -0.0337329
BCAS3 breast carcinoma amplified sequence 3 -0.03356
RYR3 ryanodine receptor 3 -0.0335144
TRIO trio Rho guanine nucleotide exchange factor -0.0331669
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0328742
CENPF centromere protein F, 350/400kDa -0.0327968
SENP6 SUMO1/sentrin specific peptidase 6 -0.0327229
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0326856
KMT2A lysine (K)-specific methyltransferase 2A -0.0326537
AHNAK AHNAK nucleoprotein -0.032269
SBF2 SET binding factor 2 -0.0321538
MT2A metallothionein 2A -0.0316028
RPL35A ribosomal protein L35a -0.0313764
CPNE8 copine VIII -0.0311536
GSTP1 glutathione S-transferase pi 1 -0.0311475
PATJ PATJ crumbs cell polarity complex component -0.0310545
RPL36A ribosomal protein L36a -0.0309555
RIGI RNA sensor RIG-I -0.0307609
THOC2 THO complex 2 -0.0306506
SINHCAF SIN3-HDAC complex associated factor -0.0305862
MAP4 microtubule-associated protein 4 -0.0302773
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0302648
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0300557
MT1X metallothionein 1X -0.0299798
RPS21 ribosomal protein S21 -0.0299395
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0298914
TRIM56 tripartite motif containing 56 -0.0296632
ZNF292 zinc finger protein 292 -0.0296593
BICD1 bicaudal D homolog 1 (Drosophila) -0.0296427
ADAR adenosine deaminase, RNA-specific -0.0295409
RGS17 regulator of G-protein signaling 17 -0.0295029
RPS27A ribosomal protein S27a -0.0294669
CDK17 cyclin-dependent kinase 17 -0.0294228
CAVIN1 caveolae associated protein 1 -0.0294225
RPL36 ribosomal protein L36 -0.0291824
DCAF7 DDB1 and CUL4 associated factor 7 -0.0288649
DHFR dihydrofolate reductase -0.0286881
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0285913
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0285362
TAGLN2 transgelin 2 -0.0283525
CBX3 chromobox homolog 3 -0.0283295
RPL12 ribosomal protein L12 -0.0282757
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.028205