Clobetasol propionate_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clobetasol propionate perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clobetasol propionate_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 0.172204
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.161803
CADM2 cell adhesion molecule 2 0.129663
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0974647
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0946313
PCLO piccolo presynaptic cytomatrix protein 0.0943912
NTM neurotrimin 0.0863607
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0732291
TSC22D2 TSC22 domain family, member 2 0.0629044
GREB1L growth regulation by estrogen in breast cancer-like 0.0555243
PARD3B par-3 family cell polarity regulator beta 0.0530073
TENM3 teneurin transmembrane protein 3 0.0529133
ZNF292 zinc finger protein 292 0.0503756
COL5A2 collagen, type V, alpha 2 0.0483856
ITGAV integrin, alpha V 0.0473289
ADGRV1 adhesion G protein-coupled receptor V1 0.0465936
ZFAND3 zinc finger, AN1-type domain 3 0.0464747
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0443192
ADGRL2 adhesion G protein-coupled receptor L2 0.0436286
ZEB2 zinc finger E-box binding homeobox 2 0.0435993
UTRN utrophin 0.0432258
FOXP2 forkhead box P2 0.0425861
NPAS3 neuronal PAS domain protein 3 0.0423822
TOX thymocyte selection-associated high mobility group box 0.0420268
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0411845
RERE arginine-glutamic acid dipeptide (RE) repeats 0.04106
CSMD3 CUB and Sushi multiple domains 3 0.0403831
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0395983
TRPS1 trichorhinophalangeal syndrome I 0.0374269
CDH19 cadherin 19, type 2 0.0373266
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0360159
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0357165
USP9X ubiquitin specific peptidase 9, X-linked 0.0351126
PDE4D phosphodiesterase 4D, cAMP-specific 0.0338811
RBM39 RNA binding motif protein 39 0.0337327
JMJD1C jumonji domain containing 1C 0.0328722
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0313243
RABGAP1L RAB GTPase activating protein 1-like 0.030444
RYBP RING1 and YY1 binding protein 0.0298898
YAP1 Yes-associated protein 1 0.0294184
FAM171B family with sequence similarity 171, member B 0.0289995
DMD dystrophin 0.0289004
PGAP1 post-GPI attachment to proteins 1 0.0273729
ECT2 epithelial cell transforming 2 0.0271536
GLS2 glutaminase 2 (liver, mitochondrial) 0.0271265
ARHGAP12 Rho GTPase activating protein 12 0.0269325
LRRC4C leucine rich repeat containing 4C 0.0264006
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0259993
ZNF608 zinc finger protein 608 0.0256264
KCTD16 potassium channel tetramerization domain containing 16 0.0254063
FUBP1 far upstream element (FUSE) binding protein 1 0.0253885
LRRN3 leucine rich repeat neuronal 3 0.0246759
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0246064
HDAC9 histone deacetylase 9 0.0241929
SENP6 SUMO1/sentrin specific peptidase 6 0.0240267
PCDH9 protocadherin 9 0.0239366
PDGFC platelet derived growth factor C 0.0236573
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 0.02352
LPIN2 lipin 2 0.0232443
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0231697
METAP2 methionyl aminopeptidase 2 0.0230589
TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 0.0229234
DOCK5 dedicator of cytokinesis 5 0.0228773
RB1CC1 RB1-inducible coiled-coil 1 0.0227398
CAMKMT calmodulin-lysine N-methyltransferase 0.0225179
ATF6 activating transcription factor 6 0.0223944
CHD7 chromodomain helicase DNA binding protein 7 0.0223833
RDX radixin 0.0223784
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0223043
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.022284
PUM2 pumilio RNA-binding family member 2 0.0219781
USH2A Usher syndrome 2A (autosomal recessive, mild) 0.0216462
UNC5C unc-5 homolog C (C. elegans) 0.0214605
NFIA nuclear factor I/A 0.0213691
MYO10 myosin X 0.0213427
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.0211727
DNAH14 dynein, axonemal, heavy chain 14 0.0211415
WDR70 WD repeat domain 70 0.0209937
RBM20 RNA binding motif protein 20 0.0209728
FIGN fidgetin 0.0209386
SHROOM3 shroom family member 3 0.0209286
PHF3 PHD finger protein 3 0.0208374
RLF rearranged L-myc fusion 0.0208239
RAB1A RAB1A, member RAS oncogene family 0.0207632
ANK2 ankyrin 2, neuronal 0.0206355
ATAD2B ATPase family, AAA domain containing 2B 0.0206081
NCKAP1 NCK-associated protein 1 0.0205605
CLASP2 cytoplasmic linker associated protein 2 0.0202144
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0196894
TRAK1 trafficking protein, kinesin binding 1 0.0195353
PLPP1 phospholipid phosphatase 1 0.0195228
WDR43 WD repeat domain 43 0.0195003
YME1L1 YME1-like 1 ATPase 0.019372
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0193477
VWA8 von Willebrand factor A domain containing 8 0.0193253
MEIS2 Meis homeobox 2 0.0193247
PTGES2 prostaglandin E synthase 2 0.0193003
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 0.01929
TMEM64 transmembrane protein 64 0.0191686
AKAP13 A kinase (PRKA) anchor protein 13 0.0190738

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.158523
TMSB10 thymosin beta 10 -0.13799
PTMA prothymosin, alpha -0.110459
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.10126
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0812031
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0739468
ACTG1 actin gamma 1 -0.0732011
RPLP1 ribosomal protein, large, P1 -0.0691053
RPS8 ribosomal protein S8 -0.0690461
RPL35A ribosomal protein L35a -0.0642986
GNAS GNAS complex locus -0.0629107
RPS16 ribosomal protein S16 -0.05977
RPL23 ribosomal protein L23 -0.058067
RPS6 ribosomal protein S6 -0.0578833
RPS12 ribosomal protein S12 -0.057878
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0576787
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0545004
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0519047
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0514487
RPL19 ribosomal protein L19 -0.0505075
POTEF POTE ankyrin domain family, member F -0.0502619
RPL11 ribosomal protein L11 -0.0467992
PFN1 profilin 1 -0.046633
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0461589
MDK midkine (neurite growth-promoting factor 2) -0.0456779
RPL37 ribosomal protein L37 -0.0455977
FN1 fibronectin 1 -0.045329
MKI67 marker of proliferation Ki-67 -0.0452695
TPT1 tumor protein, translationally-controlled 1 -0.0449208
RPS19 ribosomal protein S19 -0.0438194
S100A10 S100 calcium binding protein A10 -0.0421337
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0420104
RPS27A ribosomal protein S27a -0.0405829
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0397835
RPS3 ribosomal protein S3 -0.0397658
B2M beta-2-microglobulin -0.0393496
RPL37A ribosomal protein L37a -0.0383792
PRRC2C proline-rich coiled-coil 2C -0.0373246
GOLGA4 golgin A4 -0.0372043
SMC4 structural maintenance of chromosomes 4 -0.0366211
RPS2 ribosomal protein S2 -0.0360091
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0351384
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0351353
RPL12 ribosomal protein L12 -0.0350143
HSPB1 heat shock 27kDa protein 1 -0.0348977
CENPF centromere protein F, 350/400kDa -0.034346
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0340351
KPNB1 karyopherin (importin) beta 1 -0.0339648
PDCD5 programmed cell death 5 -0.0338627
FTL ferritin, light polypeptide -0.0332408
ENO1 enolase 1, (alpha) -0.0327467
RPL34 ribosomal protein L34 -0.0325459
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0321588
TMSB4X thymosin beta 4, X-linked -0.0321354
MAP4 microtubule-associated protein 4 -0.0321173
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0318644
S100A9 S100 calcium binding protein A9 -0.0317334
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0314127
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0311702
RACK1 receptor for activated C kinase 1 -0.0304318
YBX1 Y box binding protein 1 -0.0301992
LDHA lactate dehydrogenase A -0.0301416
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0300179
FAM177A1 family with sequence similarity 177, member A1 -0.0293629
H1-0 H1.0 linker histone -0.0293348
HMGA1 high mobility group AT-hook 1 -0.0293059
PA2G4 proliferation-associated 2G4, 38kDa -0.0289206
PGK1 phosphoglycerate kinase 1 -0.0287987
RPL9 ribosomal protein L9 -0.0285662
KTN1 kinectin 1 (kinesin receptor) -0.0282785
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0282065
RAI1 retinoic acid induced 1 -0.0281125
RPLP2 ribosomal protein, large, P2 -0.027995
ANXA1 annexin A1 -0.0279786
THOC2 THO complex 2 -0.0279755
RPL32 ribosomal protein L32 -0.0274638
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0272632
PEG10 paternally expressed 10 -0.0270047
CNRIP1 cannabinoid receptor interacting protein 1 -0.0265565
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.026528
MT2A metallothionein 2A -0.0264812
RPS5 ribosomal protein S5 -0.026481
GPC6 glypican 6 -0.0264427
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0263792
NRG1 neuregulin 1 -0.0261394
RPL5 ribosomal protein L5 -0.0260424
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0259028
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0257863
TRIO trio Rho guanine nucleotide exchange factor -0.025785
RPS27 ribosomal protein S27 -0.0257737
NAP1L1 nucleosome assembly protein 1-like 1 -0.0256916
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0256765
MACF1 microtubule-actin crosslinking factor 1 -0.0254222
CDK6 cyclin-dependent kinase 6 -0.0254209
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0252921
COTL1 coactosin-like F-actin binding protein 1 -0.0251437
CALR calreticulin -0.0251002
RPL26 ribosomal protein L26 -0.0249577
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B -0.0248514
RPS29 ribosomal protein S29 -0.0247301