Clobetasol propionate_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clobetasol propionate perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clobetasol propionate_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.152675
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.139179
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0951756
EGFR epidermal growth factor receptor 0.093604
ZFAND3 zinc finger, AN1-type domain 3 0.0925459
RTN4 reticulon 4 0.0894424
PDGFC platelet derived growth factor C 0.0779143
DSCAM Down syndrome cell adhesion molecule 0.0753147
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0718987
SSBP2 single-stranded DNA binding protein 2 0.0682989
TXNRD1 thioredoxin reductase 1 0.0673004
TJP1 tight junction protein 1 0.0637669
GARS1 glycyl-tRNA synthetase 1 0.0616045
ANK2 ankyrin 2, neuronal 0.0592486
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0585383
NCEH1 neutral cholesterol ester hydrolase 1 0.0574311
RBM39 RNA binding motif protein 39 0.0563623
EZR ezrin 0.0562398
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0559705
SLC38A2 solute carrier family 38, member 2 0.0539125
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0538836
EML4 echinoderm microtubule associated protein like 4 0.0531457
EXT1 exostosin glycosyltransferase 1 0.0529959
JMJD1C jumonji domain containing 1C 0.0521928
ZBTB20 zinc finger and BTB domain containing 20 0.0479439
ZEB1 zinc finger E-box binding homeobox 1 0.0446011
ADAM9 ADAM metallopeptidase domain 9 0.0441768
GOLGA4 golgin A4 0.0440732
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0429263
GSK3B glycogen synthase kinase 3 beta 0.0422659
QKI QKI, KH domain containing, RNA binding 0.040737
ZNF292 zinc finger protein 292 0.0406137
NCKAP1 NCK-associated protein 1 0.0403841
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0394429
PICALM phosphatidylinositol binding clathrin assembly protein 0.0393549
ELOVL5 ELOVL fatty acid elongase 5 0.0392933
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0389758
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0387451
TFG TRK-fused gene 0.0383018
IARS1 isoleucyl-tRNA synthetase 1 0.0371846
ATP9B ATPase, class II, type 9B 0.0369759
ECT2 epithelial cell transforming 2 0.0367476
BIRC6 baculoviral IAP repeat containing 6 0.0366872
COG5 component of oligomeric golgi complex 5 0.0364592
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0364002
SENP6 SUMO1/sentrin specific peptidase 6 0.036306
NAMPT nicotinamide phosphoribosyltransferase 0.0360053
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0359718
ZNF608 zinc finger protein 608 0.035891
ANKRD17 ankyrin repeat domain 17 0.0357541
EIF4A2 eukaryotic translation initiation factor 4A2 0.0349489
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0348292
CDC73 cell division cycle 73 0.0344862
EVI5 ecotropic viral integration site 5 0.0344851
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0339245
CAMTA1 calmodulin binding transcription activator 1 0.0339148
ANKRD11 ankyrin repeat domain 11 0.0337459
LDHA lactate dehydrogenase A 0.0333824
FNIP1 folliculin interacting protein 1 0.0333812
TMEM41B transmembrane protein 41B 0.0328214
NBAS neuroblastoma amplified sequence 0.0327733
KDM4C lysine (K)-specific demethylase 4C 0.0325778
TMEM135 transmembrane protein 135 0.0323316
KMT2E lysine (K)-specific methyltransferase 2E 0.0323224
MEF2A myocyte enhancer factor 2A 0.0322169
CLTC clathrin, heavy chain (Hc) 0.0321518
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0318717
GLS2 glutaminase 2 (liver, mitochondrial) 0.0318228
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0315788
NUP58 nucleoporin 58 0.0303987
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0303431
COG6 component of oligomeric golgi complex 6 0.0300981
KDM6A lysine (K)-specific demethylase 6A 0.0299924
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.029651
PDE4B phosphodiesterase 4B, cAMP-specific 0.0295594
ARL15 ADP-ribosylation factor-like 15 0.0295305
CLIC4 chloride intracellular channel 4 0.0294234
VMP1 vacuole membrane protein 1 0.0290514
SETD5 SET domain containing 5 0.0290451
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0289475
CCNL1 cyclin L1 0.0287697
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0285359
FLNB filamin B, beta 0.0281199
WAC WW domain containing adaptor with coiled-coil 0.0281043
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0280943
TTC3 tetratricopeptide repeat domain 3 0.0279455
BRWD1 bromodomain and WD repeat domain containing 1 0.0278521
SAMD4A sterile alpha motif domain containing 4A 0.027814
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0276223
AKAP9 A kinase (PRKA) anchor protein 9 0.0274812
PUM2 pumilio RNA-binding family member 2 0.0273998
PTK2 protein tyrosine kinase 2 0.0272544
SGMS1 sphingomyelin synthase 1 0.0269534
ZNF644 zinc finger protein 644 0.0266563
HEG1 heart development protein with EGF-like domains 1 0.0266438
RHOA ras homolog family member A 0.0266414
SPRED2 sprouty-related, EVH1 domain containing 2 0.0266366
FER fer (fps/fes related) tyrosine kinase 0.0265947
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.0265826
RNF145 ring finger protein 145 0.0265376

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.263982
BMP10 bone morphogenetic protein 10 -0.105539
TPT1 tumor protein, translationally-controlled 1 -0.0938052
RPL35A ribosomal protein L35a -0.0842815
MKI67 marker of proliferation Ki-67 -0.0766288
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0710783
RPS6 ribosomal protein S6 -0.0703496
RPS8 ribosomal protein S8 -0.0649686
NAV2 neuron navigator 2 -0.0635906
ACTG1 actin gamma 1 -0.0605717
RPL19 ribosomal protein L19 -0.0565965
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0562054
SMC4 structural maintenance of chromosomes 4 -0.0519625
RPLP1 ribosomal protein, large, P1 -0.0515858
CENPF centromere protein F, 350/400kDa -0.0471244
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0465783
CCND1 cyclin D1 -0.0461738
RPL34 ribosomal protein L34 -0.0460934
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0459755
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0458579
WSB1 WD repeat and SOCS box containing 1 -0.0441254
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0420935
RPLP0 ribosomal protein, large, P0 -0.0404387
BMP2K BMP2 inducible kinase -0.0395628
S100A4 S100 calcium binding protein A4 -0.0392709
RPS3 ribosomal protein S3 -0.0383315
RPS27A ribosomal protein S27a -0.0381697
KPNB1 karyopherin (importin) beta 1 -0.0373445
NAP1L1 nucleosome assembly protein 1-like 1 -0.0369689
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0367599
RPS19 ribosomal protein S19 -0.0367117
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0366831
RPL37A ribosomal protein L37a -0.0365802
DIAPH3 diaphanous-related formin 3 -0.0364481
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0361608
HSPB1 heat shock 27kDa protein 1 -0.0346595
RPLP2 ribosomal protein, large, P2 -0.0342519
DLG1 discs, large homolog 1 (Drosophila) -0.034137
ARL4C ADP-ribosylation factor-like 4C -0.0339913
TUBB4B tubulin, beta 4B class IVb -0.0333397
RPL11 ribosomal protein L11 -0.0328815
RPL36 ribosomal protein L36 -0.0327095
RPS12 ribosomal protein S12 -0.0325569
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0323841
RPS13 ribosomal protein S13 -0.0316671
GNAS GNAS complex locus -0.0316068
MYL12B myosin, light chain 12B, regulatory -0.030997
HJURP Holliday junction recognition protein -0.0304454
RPL31 ribosomal protein L31 -0.0303
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0302626
KIF5B kinesin family member 5B -0.0301984
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0291461
RPL38 ribosomal protein L38 -0.0287435
RPL26 ribosomal protein L26 -0.027865
RPL23 ribosomal protein L23 -0.0277789
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0277215
MT2A metallothionein 2A -0.0270247
RPL12 ribosomal protein L12 -0.0267205
SDK1 sidekick cell adhesion molecule 1 -0.0264915
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.026311
GSE1 Gse1 coiled-coil protein -0.0260101
RPL7A ribosomal protein L7a -0.0255836
RPL9 ribosomal protein L9 -0.0252409
EBNA1BP2 EBNA1 binding protein 2 -0.0251902
RPL13A ribosomal protein L13a -0.0249382
MYO5C myosin VC -0.0245256
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0244204
CUX1 cut-like homeobox 1 -0.0242965
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.024217
IFI6 interferon, alpha-inducible protein 6 -0.0240723
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.024066
S100A9 S100 calcium binding protein A9 -0.023914
B2M beta-2-microglobulin -0.0235645
RPS27 ribosomal protein S27 -0.0234439
HMGB1 high mobility group box 1 -0.0231836
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0227932
TPI1 triosephosphate isomerase 1 -0.022738
RPL28 ribosomal protein L28 -0.022707
BCOR BCL6 corepressor -0.022388
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0220679
RIGI RNA sensor RIG-I -0.0220333
RPS24 ribosomal protein S24 -0.0218572
RACK1 receptor for activated C kinase 1 -0.0217928
RPL8 ribosomal protein L8 -0.0217447
TMSB10 thymosin beta 10 -0.0217202
SMC3 structural maintenance of chromosomes 3 -0.021685
DEK DEK proto-oncogene -0.0216657
IFITM3 interferon induced transmembrane protein 3 -0.0216642
UNC13A unc-13 homolog A (C. elegans) -0.0215432
TPX2 TPX2, microtubule-associated -0.0214885
AKAP12 A kinase (PRKA) anchor protein 12 -0.0211217
FTL ferritin, light polypeptide -0.0210933
RPS11 ribosomal protein S11 -0.0206062
EMP3 epithelial membrane protein 3 -0.0201504
NSD2 nuclear receptor binding SET domain protein 2 -0.0200212
RRBP1 ribosome binding protein 1 -0.0198823
TMSB4X thymosin beta 4, X-linked -0.0198658
PRC1 protein regulator of cytokinesis 1 -0.0198032
HLA-B major histocompatibility complex, class I, B -0.0196196
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0195528