Clonidine (hydrochloride)_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.134699
YAP1 Yes-associated protein 1 0.0909193
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0862309
HMGA2 high mobility group AT-hook 2 0.0834593
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0803477
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0783208
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0650218
INTS6 integrator complex subunit 6 0.0628499
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0588835
PDGFC platelet derived growth factor C 0.0568311
MYH9 myosin, heavy chain 9, non-muscle 0.0533356
ZSWIM6 zinc finger, SWIM-type containing 6 0.0532555
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0493948
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0478782
YBX3 Y box binding protein 3 0.0467779
DENND5A DENN/MADD domain containing 5A 0.0465772
SFPQ splicing factor proline/glutamine-rich 0.0442439
NAP1L1 nucleosome assembly protein 1-like 1 0.0442393
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0442072
TPI1 triosephosphate isomerase 1 0.0437822
DST dystonin 0.0412481
JMJD1C jumonji domain containing 1C 0.0406094
ANKRD11 ankyrin repeat domain 11 0.0405381
ZFAND3 zinc finger, AN1-type domain 3 0.0403533
HSPA8 heat shock 70kDa protein 8 0.0401229
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0394454
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0383081
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0378719
MARCHF4 membrane associated ring-CH-type finger 4 0.0365241
ADIPOR2 adiponectin receptor 2 0.035894
RTN4 reticulon 4 0.0354903
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0349601
FNDC3B fibronectin type III domain containing 3B 0.0347504
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.034612
RPL3 ribosomal protein L3 0.0333992
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0331575
KDM5A lysine (K)-specific demethylase 5A 0.032885
RPL23 ribosomal protein L23 0.0324715
RRM2 ribonucleotide reductase M2 0.0324208
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0311325
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0309232
GSK3B glycogen synthase kinase 3 beta 0.0307741
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0302196
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0293147
CELF2 CUGBP, Elav-like family member 2 0.0292914
RCOR1 REST corepressor 1 0.0292336
SLC38A2 solute carrier family 38, member 2 0.0281874
CMIP c-Maf inducing protein 0.0281611
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0280259
SAMD4A sterile alpha motif domain containing 4A 0.0279226
TPM3 tropomyosin 3 0.0277327
ZNF638 zinc finger protein 638 0.0277124
MPG N-methylpurine-DNA glycosylase 0.0274743
SRSF5 serine/arginine-rich splicing factor 5 0.027403
MACF1 microtubule-actin crosslinking factor 1 0.0271265
CTBP2 C-terminal binding protein 2 0.0270996
EZR ezrin 0.0269737
HDAC4 histone deacetylase 4 0.026816
RPS2 ribosomal protein S2 0.0267759
WWOX WW domain containing oxidoreductase 0.0265528
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0263162
RIMKLB ribosomal modification protein rimK-like family member B 0.0262632
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0262151
BRD2 bromodomain containing 2 0.0261797
PRKCE protein kinase C, epsilon 0.0261711
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0261253
SMC1A structural maintenance of chromosomes 1A 0.0259625
RIMS2 regulating synaptic membrane exocytosis 2 0.0255559
PLEC plectin 0.0253562
NUMA1 nuclear mitotic apparatus protein 1 0.0253178
ZNF217 zinc finger protein 217 0.0252424
LPP LIM domain containing preferred translocation partner in lipoma 0.0252301
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0251967
CEP192 centrosomal protein 192kDa 0.0249285
SKI SKI proto-oncogene 0.0247144
LGALS12 lectin, galactoside-binding, soluble, 12 0.0246256
SRSF1 serine/arginine-rich splicing factor 1 0.0245683
PCDH7 protocadherin 7 0.024332
SPATS2 spermatogenesis associated, serine-rich 2 0.0242418
RPS12 ribosomal protein S12 0.0240509
NEBL nebulette 0.0238268
SRRM2 serine/arginine repetitive matrix 2 0.0235915
PCM1 pericentriolar material 1 0.0235826
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0235748
DSCAM Down syndrome cell adhesion molecule 0.0231384
CEP250 centrosomal protein 250kDa 0.0230697
MCL1 myeloid cell leukemia 1 0.0229901
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0227044
CTNND1 catenin (cadherin-associated protein), delta 1 0.0225196
DIAPH1 diaphanous-related formin 1 0.0224344
NFIB nuclear factor I/B 0.0223525
CLPTM1L CLPTM1-like 0.0223198
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.0221033
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0220641
ATP11A ATPase, class VI, type 11A 0.0219963
ALMS1 Alstrom syndrome protein 1 0.0219898
ERBIN erbb2 interacting protein 0.0218649
ETV6 ets variant 6 0.0217278
TSPAN9 tetraspanin 9 0.0217236
PDCD6 programmed cell death 6 0.0216908

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.315641
VIM vimentin -0.216257
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.088533
NLGN1 neuroligin 1 -0.073745
ATP5F1B ATP synthase F1 subunit beta -0.07281
HMGA1 high mobility group AT-hook 1 -0.0718904
BCHE butyrylcholinesterase -0.0715952
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0712567
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0662351
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0643767
MMP12 matrix metallopeptidase 12 -0.0572246
TMEM123 transmembrane protein 123 -0.0553637
SYT1 synaptotagmin I -0.0529054
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0529013
EHBP1 EH domain binding protein 1 -0.0520912
IFIH1 interferon induced with helicase C domain 1 -0.0499895
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0476552
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0474663
KPNB1 karyopherin (importin) beta 1 -0.0471999
MGAT4C MGAT4 family, member C -0.0468269
POTEF POTE ankyrin domain family, member F -0.0466086
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0462517
CLDN1 claudin 1 -0.0460326
RAB7A RAB7A, member RAS oncogene family -0.0452932
DPYD dihydropyrimidine dehydrogenase -0.0432737
EGR1 early growth response 1 -0.0431773
RASAL2 RAS protein activator like 2 -0.0419481
KIF5B kinesin family member 5B -0.0414969
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0405674
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0403895
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0396081
ZBTB20 zinc finger and BTB domain containing 20 -0.0388658
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0385834
HSPB1 heat shock 27kDa protein 1 -0.0385542
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0382738
LDHA lactate dehydrogenase A -0.0381832
ANKRD12 ankyrin repeat domain 12 -0.0376607
TUBA1B tubulin, alpha 1b -0.0376345
USP34 ubiquitin specific peptidase 34 -0.0376175
ACTG1 actin gamma 1 -0.0368095
MKI67 marker of proliferation Ki-67 -0.0360712
NAV3 neuron navigator 3 -0.0360513
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.035611
TOP2A topoisomerase (DNA) II alpha 170kDa -0.035364
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0345997
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0342223
BIRC6 baculoviral IAP repeat containing 6 -0.0333328
LDHB lactate dehydrogenase B -0.0331172
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0320025
CCSER1 coiled-coil serine-rich protein 1 -0.0314597
TUBB tubulin, beta class I -0.030762
RHOA ras homolog family member A -0.0306752
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0305337
VDAC1 voltage-dependent anion channel 1 -0.0302075
RAB1A RAB1A, member RAS oncogene family -0.0299356
TM4SF1 transmembrane 4 L six family member 1 -0.0297753
TPM4 tropomyosin 4 -0.0293566
GJA1 gap junction protein, alpha 1, 43kDa -0.0291716
ANKRD28 ankyrin repeat domain 28 -0.0287009
DLC1 DLC1 Rho GTPase activating protein -0.0280775
TMEM41B transmembrane protein 41B -0.0277603
CCN2 cellular communication network factor 2 -0.0275063
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0272547
ENO1 enolase 1, (alpha) -0.026971
SLC38A1 solute carrier family 38, member 1 -0.0268403
ZNF804A zinc finger protein 804A -0.0262
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0260898
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0258447
WDR45B WD repeat domain 45B -0.0256279
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0255408
PRR11 proline rich 11 -0.0255356
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0255201
WDPCP WD repeat containing planar cell polarity effector -0.0249749
TENM3 teneurin transmembrane protein 3 -0.0249406
HLA-A major histocompatibility complex, class I, A -0.0248842
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0246432
ANXA2 annexin A2 -0.0244418
AREG amphiregulin -0.0243502
EEF2 eukaryotic translation elongation factor 2 -0.0242535
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0240473
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.023733
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.023529
KIF18B kinesin family member 18B -0.0233118
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0232524
MAP4 microtubule-associated protein 4 -0.0232485
VMP1 vacuole membrane protein 1 -0.0231704
FSTL5 follistatin-like 5 -0.0228095
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 -0.0228013
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0227076
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0226117
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0224999
LMO7 LIM domain 7 -0.0223754
RSL1D1 ribosomal L1 domain containing 1 -0.0221744
ZNF292 zinc finger protein 292 -0.0221412
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.0220221
PATJ PATJ crumbs cell polarity complex component -0.0219929
RPS6 ribosomal protein S6 -0.0219503
TXNRD1 thioredoxin reductase 1 -0.0218834
S100A6 S100 calcium binding protein A6 -0.0217847
CXADR coxsackie virus and adenovirus receptor -0.0217323