Clonidine (hydrochloride)_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.183014
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.129253
NAV2 neuron navigator 2 0.112354
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.111706
PLEC plectin 0.0989552
FRMD4A FERM domain containing 4A 0.0972178
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.097006
RNF213 ring finger protein 213 0.0900386
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0859909
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0843382
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0801984
TRIO trio Rho guanine nucleotide exchange factor 0.0678521
ZSWIM6 zinc finger, SWIM-type containing 6 0.0673398
CTBP2 C-terminal binding protein 2 0.0670223
FMNL2 formin-like 2 0.0653946
INTS6 integrator complex subunit 6 0.0598861
FTL ferritin, light polypeptide 0.0589941
SOD2 superoxide dismutase 2, mitochondrial 0.057866
AHNAK AHNAK nucleoprotein 0.0539892
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0534891
NFE2L1 nuclear factor, erythroid 2-like 1 0.053279
APOL1 apolipoprotein L, 1 0.0527143
LMNA lamin A/C 0.051688
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0484132
CALR calreticulin 0.0481487
IGFBP3 insulin-like growth factor binding protein 3 0.0460457
PDLIM5 PDZ and LIM domain 5 0.0460226
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0453773
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0451917
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0450227
SP100 SP100 nuclear antigen 0.04471
KYNU kynureninase 0.0440994
IQGAP1 IQ motif containing GTPase activating protein 1 0.0439884
PRKCA protein kinase C, alpha 0.0438944
ASPH aspartate beta-hydroxylase 0.0434674
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0428638
NDRG1 N-myc downstream regulated 1 0.0427723
SHB Src homology 2 domain containing adaptor protein B 0.041917
TLE4 transducin-like enhancer of split 4 0.0411862
SAMD4A sterile alpha motif domain containing 4A 0.0403745
RIGI RNA sensor RIG-I 0.0401399
MSN moesin 0.0398037
COPA coatomer protein complex, subunit alpha 0.0393575
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0393482
B2M beta-2-microglobulin 0.0393141
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0386862
MCL1 myeloid cell leukemia 1 0.038381
JAK1 Janus kinase 1 0.0376647
EIF1 eukaryotic translation initiation factor 1 0.0375897
SEPTIN9 septin 9 0.0363325
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.035817
ADM adrenomedullin 0.03578
APP amyloid beta (A4) precursor protein 0.0346187
PDIA6 protein disulfide isomerase family A, member 6 0.0345709
GPC5 glypican 5 0.0345617
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0344305
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0338384
LPP LIM domain containing preferred translocation partner in lipoma 0.0335529
SRRM2 serine/arginine repetitive matrix 2 0.03352
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.033505
PDIA4 protein disulfide isomerase family A, member 4 0.0333886
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0327551
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0327239
TRA2A transformer 2 alpha homolog (Drosophila) 0.0326637
UBAP2 ubiquitin associated protein 2 0.0325565
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0325391
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0324247
SMAD3 SMAD family member 3 0.0321645
KIRREL3 kin of IRRE like 3 (Drosophila) 0.0317093
TLN1 talin 1 0.0315463
ESYT2 extended synaptotagmin-like protein 2 0.0315283
LYST lysosomal trafficking regulator 0.0310204
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0302906
TMSB10 thymosin beta 10 0.0301471
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0299751
NDEL1 nudE neurodevelopment protein 1-like 1 0.0299673
CANX calnexin 0.0298256
ATF3 activating transcription factor 3 0.0294489
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0281969
SFTPA2 surfactant protein A2 0.0280615
AFF1 AF4/FMR2 family, member 1 0.0280458
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0278256
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.027605
ANKRD11 ankyrin repeat domain 11 0.0274453
PLEKHA6 pleckstrin homology domain containing, family A member 6 0.0271936
SND1 staphylococcal nuclease and tudor domain containing 1 0.0270608
LRRC59 leucine rich repeat containing 59 0.0268224
CTNND1 catenin (cadherin-associated protein), delta 1 0.0264281
SQSTM1 sequestosome 1 0.0261649
RPL3 ribosomal protein L3 0.0261224
SPAG9 sperm associated antigen 9 0.0258763
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0257656
NIBAN1 niban apoptosis regulator 1 0.0256061
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0254744
HDAC9 histone deacetylase 9 0.0254547
USP53 ubiquitin specific peptidase 53 0.0252642
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0251549
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0251244
OPTN optineurin 0.0250478
ACTN1 actinin, alpha 1 0.0249811

decreased expression

Symbol Name Standardized Value
CXCL8 chemokine (C-X-C motif) ligand 8 -0.182792
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.137037
FTH1 ferritin, heavy polypeptide 1 -0.0979595
GLS2 glutaminase 2 (liver, mitochondrial) -0.0953187
GPC6 glypican 6 -0.0864101
NAMPT nicotinamide phosphoribosyltransferase -0.0854593
P3H2 prolyl 3-hydroxylase 2 -0.0797303
RTN4 reticulon 4 -0.0690456
GLIS3 GLIS family zinc finger 3 -0.0664396
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0651791
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0607165
EML4 echinoderm microtubule associated protein like 4 -0.0604744
PTBP3 polypyrimidine tract binding protein 3 -0.059486
TGFB2 transforming growth factor, beta 2 -0.0561974
RAI14 retinoic acid induced 14 -0.0549851
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0537413
SP3 Sp3 transcription factor -0.0522146
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0501936
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0491912
POTEF POTE ankyrin domain family, member F -0.047678
VCAM1 vascular cell adhesion molecule 1 -0.0466731
RIPK2 receptor-interacting serine-threonine kinase 2 -0.0458737
TXNRD1 thioredoxin reductase 1 -0.0458588
RHEX regulator of hemoglobinization and erythroid cell expansion -0.0435478
TMEM165 transmembrane protein 165 -0.0433369
ETV6 ets variant 6 -0.0430689
UGCG UDP-glucose ceramide glucosyltransferase -0.0427336
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0415726
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0407005
NRP1 neuropilin 1 -0.0406713
CDCP1 CUB domain containing protein 1 -0.0399429
ADAM10 ADAM metallopeptidase domain 10 -0.0383736
CSF1 colony stimulating factor 1 (macrophage) -0.0381321
WDR43 WD repeat domain 43 -0.0379057
GOLGA4 golgin A4 -0.0377601
STK17A serine/threonine kinase 17a -0.0377271
TGFBI transforming growth factor, beta-induced, 68kDa -0.0376485
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0375744
GCC2 GRIP and coiled-coil domain containing 2 -0.0372065
AGFG1 ArfGAP with FG repeats 1 -0.0369311
PTGR1 prostaglandin reductase 1 -0.0367124
GNA12 guanine nucleotide binding protein (G protein) alpha 12 -0.0360895
MAP1B microtubule-associated protein 1B -0.0357204
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0354087
BHLHE40 basic helix-loop-helix family, member e40 -0.0339868
NRIP1 nuclear receptor interacting protein 1 -0.0329252
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.032793
CD44 CD44 molecule (Indian blood group) -0.0320898
OSMR oncostatin M receptor -0.0318564
AVL9 AVL9 homolog (S. cerevisiase) -0.0316627
ATXN10 ataxin 10 -0.0313317
TPM1 tropomyosin 1 (alpha) -0.0307102
CPEB2 cytoplasmic polyadenylation element binding protein 2 -0.0302838
GDA guanine deaminase -0.0300285
AKAP9 A kinase (PRKA) anchor protein 9 -0.0300239
NRP2 neuropilin 2 -0.0299719
MBD5 methyl-CpG binding domain protein 5 -0.0298157
MFF mitochondrial fission factor -0.0295606
SCFD2 sec1 family domain containing 2 -0.0291139
SBF2 SET binding factor 2 -0.0286066
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0283126
CBX3 chromobox homolog 3 -0.028054
PBX1 pre-B-cell leukemia homeobox 1 -0.028041
OXR1 oxidation resistance 1 -0.0276582
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0275695
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0271429
ANXA4 annexin A4 -0.0271162
RBMS1 RNA binding motif, single stranded interacting protein 1 -0.0270125
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0268686
CLINT1 clathrin interactor 1 -0.0266753
PDE4D phosphodiesterase 4D, cAMP-specific -0.0265021
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 -0.0258287
CP ceruloplasmin (ferroxidase) -0.0257883
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0257829
GGNBP2 gametogenetin binding protein 2 -0.0254252
PPP1R15B protein phosphatase 1, regulatory subunit 15B -0.0253965
SCAF11 SR-related CTD-associated factor 11 -0.0251999
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0245154
PALS2 protein associated with LIN7 2, MAGUK p55 family member -0.0243451
PREX2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 -0.0241221
CREB3L2 cAMP responsive element binding protein 3-like 2 -0.0241146
CCDC146 coiled-coil domain containing 146 -0.024082
ZNF652 zinc finger protein 652 -0.0240725
TSPAN13 tetraspanin 13 -0.0239929
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0237999
CD46 CD46 molecule, complement regulatory protein -0.0237645
BICC1 BicC family RNA binding protein 1 -0.0235374
LDHA lactate dehydrogenase A -0.0234532
VCAN versican -0.023413
NOP58 NOP58 ribonucleoprotein -0.0232742
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0232204
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0229231
SRPK2 SRSF protein kinase 2 -0.0228242
BABAM2 BRISC and BRCA1 A complex member 2 -0.0227643
RIC1 RAB6A GEF complex partner 1 -0.0225697
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.0223801
TNS3 tensin 3 -0.0223101
TRAM1 translocation associated membrane protein 1 -0.0220078
BIRC6 baculoviral IAP repeat containing 6 -0.0219559
RAD54B RAD54 homolog B (S. cerevisiae) -0.0218016