Clonidine (hydrochloride)_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.163254
FMN1 formin 1 0.106749
TLE4 transducin-like enhancer of split 4 0.0793061
ZSWIM6 zinc finger, SWIM-type containing 6 0.0663512
MYH9 myosin, heavy chain 9, non-muscle 0.0643419
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0618245
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0597366
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0591625
RNF213 ring finger protein 213 0.0487927
LSAMP limbic system-associated membrane protein 0.0475862
EIF1 eukaryotic translation initiation factor 1 0.0441701
EXT1 exostosin glycosyltransferase 1 0.0409326
RPL23 ribosomal protein L23 0.0407426
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0398122
TPM1 tropomyosin 1 (alpha) 0.0394434
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0384443
STK38L serine/threonine kinase 38 like 0.0383221
GLCCI1 glucocorticoid induced 1 0.0368343
VMP1 vacuole membrane protein 1 0.0368338
PDE10A phosphodiesterase 10A 0.0365735
EGR1 early growth response 1 0.036159
TPST1 tyrosylprotein sulfotransferase 1 0.0358229
MCL1 myeloid cell leukemia 1 0.0347876
RPS12 ribosomal protein S12 0.0335528
THBS1 thrombospondin 1 0.0332287
RPS2 ribosomal protein S2 0.03267
MYO1E myosin IE 0.0323749
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0299197
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.029071
SRRM2 serine/arginine repetitive matrix 2 0.0285504
PLPP1 phospholipid phosphatase 1 0.028531
ASPH aspartate beta-hydroxylase 0.0282136
ACTG1 actin gamma 1 0.027371
FERMT2 fermitin family member 2 0.0269158
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0267456
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0262945
KLHL13 kelch-like family member 13 0.0261305
PDLIM5 PDZ and LIM domain 5 0.0257301
NPAS2 neuronal PAS domain protein 2 0.0248375
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0246927
FNDC3A fibronectin type III domain containing 3A 0.0246492
HSPA8 heat shock 70kDa protein 8 0.0245349
RPS6 ribosomal protein S6 0.0243234
RET ret proto-oncogene 0.024238
CTNND1 catenin (cadherin-associated protein), delta 1 0.024213
FAM107B family with sequence similarity 107, member B 0.0236757
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0235823
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0235649
MED13 mediator complex subunit 13 0.023198
EEF2 eukaryotic translation elongation factor 2 0.0231761
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0227193
TPM4 tropomyosin 4 0.0225844
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0225754
ACTN1 actinin, alpha 1 0.0225753
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0217841
HOMER1 homer scaffolding protein 1 0.0217196
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0217064
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.021657
SIK2 salt-inducible kinase 2 0.0216297
TENM4 teneurin transmembrane protein 4 0.0215475
ITGAV integrin, alpha V 0.0212722
NFE2L1 nuclear factor, erythroid 2-like 1 0.0212645
B2M beta-2-microglobulin 0.0211271
ITPRID2 ITPR interacting domain containing 2 0.02106
SET SET nuclear proto-oncogene 0.0209657
EGFR epidermal growth factor receptor 0.0208863
BRD2 bromodomain containing 2 0.0208479
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0208409
RPL35A ribosomal protein L35a 0.020785
RIGI RNA sensor RIG-I 0.0206803
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0204588
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0204335
CRH corticotropin releasing hormone 0.0203621
COL4A1 collagen, type IV, alpha 1 0.0203235
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0203127
RPS27A ribosomal protein S27a 0.0201456
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0200765
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0200533
PNN pinin, desmosome associated protein 0.020009
BCAS3 breast carcinoma amplified sequence 3 0.0199909
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0199647
RPS17 ribosomal protein S17 0.0197403
CHD4 chromodomain helicase DNA binding protein 4 0.0197283
TBX2 T-box 2 0.0191739
EEF1G eukaryotic translation elongation factor 1 gamma 0.0190438
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0189708
LIMA1 LIM domain and actin binding 1 0.0188697
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0188002
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.018748
FHL2 four and a half LIM domains 2 0.0182864
LOC102724023 ES1 protein homolog, mitochondrial 0.0182264
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0181128
SLIT2 slit homolog 2 (Drosophila) 0.0180938
RPL26 ribosomal protein L26 0.0180048
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0177536
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0177118
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0176596
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0174432
ZNF644 zinc finger protein 644 0.0173662
FLNA filamin A, alpha 0.01656

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.507233
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.113008
NRG1 neuregulin 1 -0.106475
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0927591
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0907959
MAP1B microtubule-associated protein 1B -0.0652185
SOS1 son of sevenless homolog 1 (Drosophila) -0.0609303
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0601295
VIM vimentin -0.0593296
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.055036
NDRG1 N-myc downstream regulated 1 -0.0541021
COL1A1 collagen, type I, alpha 1 -0.050753
LIMCH1 LIM and calponin homology domains 1 -0.0503745
HELZ helicase with zinc finger -0.045833
GDF15 growth differentiation factor 15 -0.0443358
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0435094
FAM13A family with sequence similarity 13, member A -0.0422804
ZBTB20 zinc finger and BTB domain containing 20 -0.0415526
AKAP12 A kinase (PRKA) anchor protein 12 -0.0410138
SYT1 synaptotagmin I -0.0405686
COL4A5 collagen, type IV, alpha 5 -0.0368371
GOLGA4 golgin A4 -0.0364152
COL3A1 collagen, type III, alpha 1 -0.0356882
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0355749
WDR45B WD repeat domain 45B -0.0352113
MEF2A myocyte enhancer factor 2A -0.0347663
NPEPPS aminopeptidase puromycin sensitive -0.0337947
ZNF804A zinc finger protein 804A -0.0337103
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0327601
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0326864
ZNF292 zinc finger protein 292 -0.0325258
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0313501
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0308009
CDH10 cadherin 10, type 2 (T2-cadherin) -0.030683
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0302529
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0290994
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0289713
BRWD1 bromodomain and WD repeat domain containing 1 -0.028625
MAML2 mastermind-like 2 (Drosophila) -0.0283744
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0279886
LCORL ligand dependent nuclear receptor corepressor-like -0.0277834
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0272288
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0268708
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0266284
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0264298
GLG1 golgi glycoprotein 1 -0.0258898
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0258605
TENT5A terminal nucleotidyltransferase 5A -0.0258026
USP3 ubiquitin specific peptidase 3 -0.0254114
AHR aryl hydrocarbon receptor -0.0253198
NCAM2 neural cell adhesion molecule 2 -0.025123
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0249423
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0249153
COPA coatomer protein complex, subunit alpha -0.0247769
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0246847
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0246141
SRP54 signal recognition particle 54kDa -0.0244311
SEC31A SEC31 homolog A (S. cerevisiae) -0.0242348
CD36 CD36 molecule (thrombospondin receptor) -0.0240609
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0239483
CLINT1 clathrin interactor 1 -0.0236045
STC1 stanniocalcin 1 -0.0235693
SETD5 SET domain containing 5 -0.0235616
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0235052
CADM1 cell adhesion molecule 1 -0.0233597
SSH2 slingshot protein phosphatase 2 -0.022655
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0223936
KDM2A lysine (K)-specific demethylase 2A -0.0223843
NBEA neurobeachin -0.0223573
USP34 ubiquitin specific peptidase 34 -0.0222889
UNC5C unc-5 homolog C (C. elegans) -0.0221965
MARCHF6 membrane associated ring-CH-type finger 6 -0.0219687
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0219389
FNBP1 formin binding protein 1 -0.0217772
DCAF7 DDB1 and CUL4 associated factor 7 -0.0216716
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0216282
MBD5 methyl-CpG binding domain protein 5 -0.0215291
GPC5 glypican 5 -0.0214356
CDC27 cell division cycle 27 -0.0212858
HIP1 huntingtin interacting protein 1 -0.0212451
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0211682
ACBD3 acyl-CoA binding domain containing 3 -0.0210799
C1ORF21 chromosome 1 open reading frame 21 -0.021036
RTN4 reticulon 4 -0.020898
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 -0.0208805
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0208003
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0206526
NREP neuronal regeneration related protein -0.0205589
IARS1 isoleucyl-tRNA synthetase 1 -0.0205505
SPAG9 sperm associated antigen 9 -0.0205358
SEC24D SEC24 family member D -0.0204664
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0203021
DLC1 DLC1 Rho GTPase activating protein -0.020272
CDH2 cadherin 2, type 1, N-cadherin (neuronal) -0.0202687
USP9Y ubiquitin specific peptidase 9, Y-linked -0.0201252
GNA13 guanine nucleotide binding protein (G protein), alpha 13 -0.0201249
DLG1 discs, large homolog 1 (Drosophila) -0.0201002
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0200949
PIBF1 progesterone immunomodulatory binding factor 1 -0.0198983
WSB1 WD repeat and SOCS box containing 1 -0.0198354