Clonidine (hydrochloride)_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.214338
MYH9 myosin, heavy chain 9, non-muscle 0.200377
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.187608
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.134301
MT2A metallothionein 2A 0.124536
PLEC plectin 0.115193
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.11089
PABPC1 poly(A) binding protein, cytoplasmic 1 0.110711
COL6A3 collagen, type VI, alpha 3 0.105687
MSN moesin 0.103608
COL5A1 collagen, type V, alpha 1 0.0994493
MAP1B microtubule-associated protein 1B 0.0899122
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0885427
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0879469
MYO10 myosin X 0.0877774
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0849724
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.082113
SEPTIN9 septin 9 0.0797165
AKAP12 A kinase (PRKA) anchor protein 12 0.0783474
ASPH aspartate beta-hydroxylase 0.07762
DST dystonin 0.0770797
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0673878
COL6A2 collagen, type VI, alpha 2 0.0652748
TMSB10 thymosin beta 10 0.0652207
TRIO trio Rho guanine nucleotide exchange factor 0.0647491
NALF1 NALCN channel auxiliary factor 1 0.0621655
TPI1 triosephosphate isomerase 1 0.0610029
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0592315
AHNAK AHNAK nucleoprotein 0.0578039
TPM3 tropomyosin 3 0.0577149
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0575504
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0544695
EIF1 eukaryotic translation initiation factor 1 0.054469
NAV1 neuron navigator 1 0.0530061
ANGPTL4 angiopoietin-like 4 0.0527748
KTN1 kinectin 1 (kinesin receptor) 0.0524147
PDIA3 protein disulfide isomerase family A, member 3 0.0522696
MT1X metallothionein 1X 0.050744
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.050413
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0499694
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0498168
HSPA8 heat shock 70kDa protein 8 0.047692
ACTN1 actinin, alpha 1 0.0473923
ENO1 enolase 1, (alpha) 0.0472691
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0469883
CD44 CD44 molecule (Indian blood group) 0.0465631
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0462721
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0455416
MPRIP myosin phosphatase Rho interacting protein 0.0449162
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0445938
STC1 stanniocalcin 1 0.0442844
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0440487
PRSS23 protease, serine, 23 0.043858
LAMB3 laminin, beta 3 0.0426487
RRM2 ribonucleotide reductase M2 0.0425647
TIMP1 TIMP metallopeptidase inhibitor 1 0.0418672
CLIC4 chloride intracellular channel 4 0.0412172
PLAUR plasminogen activator, urokinase receptor 0.0411585
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0409637
WWOX WW domain containing oxidoreductase 0.0403933
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0401741
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0394074
ANKRD11 ankyrin repeat domain 11 0.0389734
TNS1 tensin 1 0.038794
PDIA6 protein disulfide isomerase family A, member 6 0.038269
COL7A1 collagen, type VII, alpha 1 0.0380225
MCL1 myeloid cell leukemia 1 0.0378651
PTPRM protein tyrosine phosphatase, receptor type, M 0.0378628
CENPF centromere protein F, 350/400kDa 0.0369533
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0364798
G0S2 G0/G1 switch 2 0.0363796
CAPRIN2 caprin family member 2 0.0362128
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0360589
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0355006
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0354309
DSPP dentin sialophosphoprotein 0.0348894
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0347623
MACF1 microtubule-actin crosslinking factor 1 0.0343983
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0342091
SFPQ splicing factor proline/glutamine-rich 0.034182
NAP1L1 nucleosome assembly protein 1-like 1 0.0341111
AFF3 AF4/FMR2 family, member 3 0.0334664
NFE2L1 nuclear factor, erythroid 2-like 1 0.0334645
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0331594
RPL3 ribosomal protein L3 0.0329763
HILPDA hypoxia inducible lipid droplet-associated 0.0325868
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0324055
WNK1 WNK lysine deficient protein kinase 1 0.0322422
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0314973
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.031385
SET SET nuclear proto-oncogene 0.0311415
ZSWIM6 zinc finger, SWIM-type containing 6 0.0310411
EGFR epidermal growth factor receptor 0.031038
LMNA lamin A/C 0.0309124
FAM13A family with sequence similarity 13, member A 0.0307618
JUN jun proto-oncogene 0.0304397
RPS6 ribosomal protein S6 0.0302345
B2M beta-2-microglobulin 0.0299759
NCOR2 nuclear receptor corepressor 2 0.0297071
FAT1 FAT atypical cadherin 1 0.0296301

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.239279
FN1 fibronectin 1 -0.172127
VIM vimentin -0.159313
IGF2 insulin-like growth factor 2 -0.131967
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.104308
FNDC3B fibronectin type III domain containing 3B -0.0870466
CDH13 cadherin 13 -0.0827716
CDCP1 CUB domain containing protein 1 -0.0636248
COL6A1 collagen, type VI, alpha 1 -0.0580364
ANKRD28 ankyrin repeat domain 28 -0.0501939
LOX lysyl oxidase -0.0498172
SBF2 SET binding factor 2 -0.048712
PDE10A phosphodiesterase 10A -0.0463194
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0438623
OSMR oncostatin M receptor -0.0428123
SDK1 sidekick cell adhesion molecule 1 -0.0423818
GLIS3 GLIS family zinc finger 3 -0.0415215
NDRG1 N-myc downstream regulated 1 -0.0406133
APOLD1 apolipoprotein L domain containing 1 -0.0404125
COL1A1 collagen, type I, alpha 1 -0.0382055
CD109 CD109 molecule -0.0374394
TAS2R14 taste receptor, type 2, member 14 -0.0366534
TENM2 teneurin transmembrane protein 2 -0.0350901
IGFBP3 insulin-like growth factor binding protein 3 -0.034395
NGLY1 N-glycanase 1 -0.0343837
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0341894
ANKRD12 ankyrin repeat domain 12 -0.033998
RPS24 ribosomal protein S24 -0.033581
ZBTB20 zinc finger and BTB domain containing 20 -0.0334826
RPLP1 ribosomal protein, large, P1 -0.0329334
HMGA2 high mobility group AT-hook 2 -0.0328976
TMEM165 transmembrane protein 165 -0.032752
GOLGA4 golgin A4 -0.0322704
FBXL2 F-box and leucine-rich repeat protein 2 -0.0320027
BIRC6 baculoviral IAP repeat containing 6 -0.0307088
BTG1 B-cell translocation gene 1, anti-proliferative -0.0304416
SEC31A SEC31 homolog A (S. cerevisiae) -0.0302586
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0290673
LCORL ligand dependent nuclear receptor corepressor-like -0.0276802
TGFBI transforming growth factor, beta-induced, 68kDa -0.026255
ANTXR2 anthrax toxin receptor 2 -0.0261599
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0259533
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0254175
RPL38 ribosomal protein L38 -0.0253831
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0252699
ANXA2 annexin A2 -0.0248683
ZMYND8 zinc finger, MYND-type containing 8 -0.0247597
RPS16 ribosomal protein S16 -0.0246202
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0245837
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0238151
IGF1R insulin-like growth factor 1 receptor -0.0236952
FMN1 formin 1 -0.0233747
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0233235
FTH1 ferritin, heavy polypeptide 1 -0.0232875
RPL35A ribosomal protein L35a -0.0231406
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.0229707
TNNC1 troponin C type 1 (slow) -0.0229373
IGFBP4 insulin-like growth factor binding protein 4 -0.0227037
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0225191
WDR45B WD repeat domain 45B -0.0223085
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0222699
SGO2 shugoshin 2 -0.0221971
CLMP CXADR-like membrane protein -0.0220444
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0215488
EYA1 EYA transcriptional coactivator and phosphatase 1 -0.0213719
ALDH1A3 aldehyde dehydrogenase 1 family, member A3 -0.0209111
TMEM263 transmembrane protein 263 -0.0202679
TPT1 tumor protein, translationally-controlled 1 -0.020236
RNF149 ring finger protein 149 -0.0201529
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0200073
PNISR PNN-interacting serine/arginine-rich protein -0.0198541
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0198221
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0196724
ELL2 elongation factor, RNA polymerase II, 2 -0.0194958
SREBF2 sterol regulatory element binding transcription factor 2 -0.0193934
AFF4 AF4/FMR2 family, member 4 -0.0193064
RPL39 ribosomal protein L39 -0.0192822
TENT4A terminal nucleotidyltransferase 4A -0.0192025
PPP1R13L protein phosphatase 1, regulatory subunit 13 like -0.0187617
ACTG1 actin gamma 1 -0.0186978
ITCH itchy E3 ubiquitin protein ligase -0.0185343
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0183945
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0182905
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 -0.0182243
NECTIN2 nectin cell adhesion molecule 2 -0.0181195
PCNX4 pecanex 4 -0.0179937
FOXJ3 forkhead box J3 -0.0179351
CEP350 centrosomal protein 350kDa -0.0179085
POM121 POM121 transmembrane nucleoporin -0.0177271
BHLHE40 basic helix-loop-helix family, member e40 -0.0174985
KDM2A lysine (K)-specific demethylase 2A -0.0173481
ENOSF1 enolase superfamily member 1 -0.0172934
SCLT1 sodium channel and clathrin linker 1 -0.0171882
OGA O-GlcNAcase -0.0171789
FNIP1 folliculin interacting protein 1 -0.017159
TAOK1 TAO kinase 1 -0.0169886
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0169781
DCAF10 DDB1 and CUL4 associated factor 10 -0.016762
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0167605
SERINC2 serine incorporator 2 -0.0166314