Clonidine (hydrochloride)_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.198061
PM20D1 peptidase M20 domain containing 1 0.146005
TM4SF1 transmembrane 4 L six family member 1 0.112088
MYH9 myosin, heavy chain 9, non-muscle 0.0931022
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0930148
ASPH aspartate beta-hydroxylase 0.0825659
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0752265
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.069064
MCL1 myeloid cell leukemia 1 0.0635812
FAM107B family with sequence similarity 107, member B 0.0624736
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0593156
CAVIN1 caveolae associated protein 1 0.0562737
ANGPTL4 angiopoietin-like 4 0.0550248
BASP1 brain abundant, membrane attached signal protein 1 0.0548158
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0526227
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0519001
RPS2 ribosomal protein S2 0.0485317
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.048503
NAP1L1 nucleosome assembly protein 1-like 1 0.0471072
TPT1 tumor protein, translationally-controlled 1 0.0455656
WWOX WW domain containing oxidoreductase 0.0446771
TPI1 triosephosphate isomerase 1 0.040376
PDE4D phosphodiesterase 4D, cAMP-specific 0.040139
HSPA8 heat shock 70kDa protein 8 0.0400563
TPM3 tropomyosin 3 0.0379124
SMOC1 SPARC related modular calcium binding 1 0.0355654
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0349191
RPL3 ribosomal protein L3 0.0345093
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0344096
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0333236
NIPBL Nipped-B homolog (Drosophila) 0.0331454
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0331299
DOCK5 dedicator of cytokinesis 5 0.0329891
ZSWIM6 zinc finger, SWIM-type containing 6 0.0326194
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0325463
BMP6 bone morphogenetic protein 6 0.0325438
PRRC2C proline-rich coiled-coil 2C 0.0320165
PLEC plectin 0.0299374
SAMD4A sterile alpha motif domain containing 4A 0.0296864
LAMC2 laminin, gamma 2 0.029316
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0291734
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0285497
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0278876
ELL2 elongation factor, RNA polymerase II, 2 0.0276477
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0273375
FLNA filamin A, alpha 0.0270822
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0268145
BRD2 bromodomain containing 2 0.0260095
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0255322
AHNAK AHNAK nucleoprotein 0.0251105
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0248065
RPL4 ribosomal protein L4 0.024569
RPS3 ribosomal protein S3 0.0242486
EGR1 early growth response 1 0.0242069
BLTP2 bridge-like lipid transfer protein family member 2 0.0238438
SFPQ splicing factor proline/glutamine-rich 0.0232964
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0231418
ACTG1 actin gamma 1 0.0231301
EIF1 eukaryotic translation initiation factor 1 0.0229828
AHNAK2 AHNAK nucleoprotein 2 0.0227587
C15ORF48 chromosome 15 open reading frame 48 0.022681
COTL1 coactosin-like F-actin binding protein 1 0.0224512
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0223551
RRM2 ribonucleotide reductase M2 0.0222749
TPR translocated promoter region, nuclear basket protein 0.0222094
NFE2L1 nuclear factor, erythroid 2-like 1 0.0222032
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0220601
MYL12B myosin, light chain 12B, regulatory 0.0217991
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0211973
STK17A serine/threonine kinase 17a 0.0210389
ACTN1 actinin, alpha 1 0.0208006
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0207958
GDI2 GDP dissociation inhibitor 2 0.0207686
RPL23 ribosomal protein L23 0.020767
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0206033
KYNU kynureninase 0.0202404
DSCAM Down syndrome cell adhesion molecule 0.0202303
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0201884
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0201486
NUMA1 nuclear mitotic apparatus protein 1 0.0201164
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0200466
MSN moesin 0.0199786
SON SON DNA binding protein 0.019885
PTPRF protein tyrosine phosphatase, receptor type, F 0.0198365
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0195677
ERRFI1 ERBB receptor feedback inhibitor 1 0.0195585
ANKRD11 ankyrin repeat domain 11 0.0194346
SRSF5 serine/arginine-rich splicing factor 5 0.0193375
CFAP298 cilia and flagella associated protein 298 0.0191535
NABP1 nucleic acid binding protein 1 0.0191195
TASOR2 transcription activation suppressor family member 2 0.0190755
SRRM2 serine/arginine repetitive matrix 2 0.0190698
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0189515
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0187722
BZW1 basic leucine zipper and W2 domains 1 0.0187495
PRSS23 protease, serine, 23 0.0187242
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.0185016
RAD21 RAD21 homolog (S. pombe) 0.0184441
MT1X metallothionein 1X 0.0184207
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0182603

decreased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 -0.230287
MT2A metallothionein 2A -0.220232
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.199843
FTL ferritin, light polypeptide -0.129482
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.127304
VIM vimentin -0.121323
TMSB10 thymosin beta 10 -0.106956
TXNRD1 thioredoxin reductase 1 -0.10582
IGF2 insulin-like growth factor 2 -0.102812
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.102296
IGFBP3 insulin-like growth factor binding protein 3 -0.0847419
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0569584
RPLP1 ribosomal protein, large, P1 -0.0561265
THSD4 thrombospondin, type I, domain containing 4 -0.051946
FNDC3B fibronectin type III domain containing 3B -0.0506696
POTEF POTE ankyrin domain family, member F -0.0503008
RPS29 ribosomal protein S29 -0.0467784
BABAM2 BRISC and BRCA1 A complex member 2 -0.0464503
ERBIN erbb2 interacting protein -0.0462933
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0445823
TPD52 tumor protein D52 -0.0438113
RPS6 ribosomal protein S6 -0.0423566
KCMF1 potassium channel modulatory factor 1 -0.0414034
CD99 CD99 molecule -0.0406527
ATP5F1B ATP synthase F1 subunit beta -0.0406122
RPL36 ribosomal protein L36 -0.0405864
EGFR epidermal growth factor receptor -0.0400171
PFN1 profilin 1 -0.0398174
ZFAND3 zinc finger, AN1-type domain 3 -0.0396425
PDIA3 protein disulfide isomerase family A, member 3 -0.0389786
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0376382
IGFBP4 insulin-like growth factor binding protein 4 -0.0371896
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0364684
RTN4 reticulon 4 -0.0360732
RPL28 ribosomal protein L28 -0.0359657
RPS19 ribosomal protein S19 -0.0359635
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0359181
PARD3 par-3 family cell polarity regulator -0.0347881
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0346761
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0345567
KMT2E lysine (K)-specific methyltransferase 2E -0.0341721
RPS25 ribosomal protein S25 -0.0338993
RPS27 ribosomal protein S27 -0.0338583
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0337371
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0333119
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0332092
NRG1 neuregulin 1 -0.032827
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0327792
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0326583
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0324695
FGB fibrinogen beta chain -0.0319709
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0314499
SVIL supervillin -0.0310616
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0309809
MAP1B microtubule-associated protein 1B -0.0309215
BHLHE40 basic helix-loop-helix family, member e40 -0.0308016
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0306572
TRIO trio Rho guanine nucleotide exchange factor -0.0300055
RPS16 ribosomal protein S16 -0.029904
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0298482
RNF145 ring finger protein 145 -0.0298257
RHOA ras homolog family member A -0.0294469
TPM1 tropomyosin 1 (alpha) -0.0290476
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0288494
KDM2A lysine (K)-specific demethylase 2A -0.0286592
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0280965
PKM pyruvate kinase, muscle -0.0278343
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0278028
RASAL2 RAS protein activator like 2 -0.0276358
BICC1 BicC family RNA binding protein 1 -0.0276224
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0273684
IL6 interleukin 6 -0.0273165
RPS23 ribosomal protein S23 -0.0271788
TPM4 tropomyosin 4 -0.0270869
RPL19 ribosomal protein L19 -0.0267911
WDR43 WD repeat domain 43 -0.0267644
YY1 YY1 transcription factor -0.0264395
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0263647
DENND4A DENN/MADD domain containing 4A -0.0263634
ZNF292 zinc finger protein 292 -0.0262695
HMGA1 high mobility group AT-hook 1 -0.0261544
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0261189
CA2 carbonic anhydrase II -0.026086
ZNF609 zinc finger protein 609 -0.0260426
MYADM myeloid-associated differentiation marker -0.025922
CUX1 cut-like homeobox 1 -0.0255997
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0255161
USP3 ubiquitin specific peptidase 3 -0.0255104
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0252806
S100A10 S100 calcium binding protein A10 -0.0250448
HSPB1 heat shock 27kDa protein 1 -0.0250077
NOP58 NOP58 ribonucleoprotein -0.0246141
SBF2 SET binding factor 2 -0.024614
PTK2 protein tyrosine kinase 2 -0.0245297
AK1 adenylate kinase 1 -0.0243547
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0240933
CYRIB CYFIP related Rac1 interactor B -0.0240215
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0239274
AKAP13 A kinase (PRKA) anchor protein 13 -0.0237953
COG5 component of oligomeric golgi complex 5 -0.0237818