Clonidine (hydrochloride)_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SAMD4A sterile alpha motif domain containing 4A 0.157336
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.137574
LAMB3 laminin, beta 3 0.126614
MYO1E myosin IE 0.104384
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0996698
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0904127
KYNU kynureninase 0.0880159
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.079356
MAST4 microtubule associated serine/threonine kinase family member 4 0.0770642
LAMC2 laminin, gamma 2 0.0756975
RSAD2 radical S-adenosyl methionine domain containing 2 0.0718061
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0701919
FNDC3B fibronectin type III domain containing 3B 0.0697929
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0684611
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0656623
MYH9 myosin, heavy chain 9, non-muscle 0.0640841
FN1 fibronectin 1 0.0626188
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0613657
LIMCH1 LIM and calponin homology domains 1 0.056844
FMN1 formin 1 0.0558352
F3 coagulation factor III (thromboplastin, tissue factor) 0.055627
GRB10 growth factor receptor-bound protein 10 0.0538553
PRELID2 PRELI domain containing 2 0.0537754
RIGI RNA sensor RIG-I 0.0534309
MCL1 myeloid cell leukemia 1 0.052815
GRAMD1B GRAM domain containing 1B 0.0521031
SMAD3 SMAD family member 3 0.0518672
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.051757
DOCK5 dedicator of cytokinesis 5 0.0516734
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0507287
LOC112694756 uncharaterized LOC112694756 0.0498159
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0492143
IGF1R insulin-like growth factor 1 receptor 0.0491123
LAMA4 laminin, alpha 4 0.0489991
OASL 2'-5'-oligoadenylate synthetase-like 0.04843
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0479916
SDC4 syndecan 4 0.0478623
MXD1 MAX dimerization protein 1 0.0474022
FNDC3A fibronectin type III domain containing 3A 0.0470179
BACE2 beta-site APP-cleaving enzyme 2 0.0465631
ASPH aspartate beta-hydroxylase 0.0439048
ARHGAP5 Rho GTPase activating protein 5 0.043857
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma 0.0425957
PLAUR plasminogen activator, urokinase receptor 0.0416876
IRAK2 interleukin-1 receptor-associated kinase 2 0.0413454
SH3KBP1 SH3-domain kinase binding protein 1 0.0410547
MAML3 mastermind-like 3 (Drosophila) 0.0409361
HOOK2 hook microtubule-tethering protein 2 0.0399483
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0390938
BMAL2 basic helix-loop-helix ARNT like 2 0.0390745
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0388901
PFKP phosphofructokinase, platelet 0.0382817
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0382484
KLC1 kinesin light chain 1 0.0381751
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0380596
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0380199
ARB2A ARB2 cotranscriptional regulator A 0.0377556
USP53 ubiquitin specific peptidase 53 0.037496
DTNA dystrobrevin, alpha 0.0374591
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0373496
RBM47 RNA binding motif protein 47 0.0372592
RIMKLB ribosomal modification protein rimK-like family member B 0.037123
AFF1 AF4/FMR2 family, member 1 0.0363767
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0361464
OSMR oncostatin M receptor 0.036107
IFIH1 interferon induced with helicase C domain 1 0.035248
EXT1 exostosin glycosyltransferase 1 0.0350638
RAD51B RAD51 paralog B 0.0348644
MSN moesin 0.0343987
SOD2 superoxide dismutase 2, mitochondrial 0.0342065
EGFR epidermal growth factor receptor 0.0341019
KIAA1328 KIAA1328 0.0331987
GRAMD2B GRAM domain containing 2B 0.0330832
CADM1 cell adhesion molecule 1 0.0329941
HILPDA hypoxia inducible lipid droplet-associated 0.0329279
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.032733
KRT17 keratin 17, type I 0.0325143
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0320909
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0320797
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0317481
APP amyloid beta (A4) precursor protein 0.0315905
FLNB filamin B, beta 0.0314873
BIRC3 baculoviral IAP repeat containing 3 0.0310833
SEC24A SEC24 family member A 0.0310565
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0308834
CALU calumenin 0.0308544
METTL15 methyltransferase like 15 0.0305803
GPC6 glypican 6 0.0305212
GLS2 glutaminase 2 (liver, mitochondrial) 0.0304177
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0301835
AKAP12 A kinase (PRKA) anchor protein 12 0.0299232
CEMIP cell migration inducing protein, hyaluronan binding 0.029779
RND3 Rho family GTPase 3 0.0297342
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0295809
AFF4 AF4/FMR2 family, member 4 0.0292997
IGFBP5 insulin-like growth factor binding protein 5 0.0292985
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0288932
TENM3 teneurin transmembrane protein 3 0.0287979
NSD1 nuclear receptor binding SET domain protein 1 0.0287047
TXNIP thioredoxin interacting protein 0.0286792

decreased expression

Symbol Name Standardized Value
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.123883
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.110546
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.107702
PTMA prothymosin, alpha -0.0988756
RPS6 ribosomal protein S6 -0.0916052
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0883226
LMO7 LIM domain 7 -0.0827456
ATOSA atos homolog A -0.0815666
IGFBP3 insulin-like growth factor binding protein 3 -0.0794375
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0776079
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0763267
RPS25 ribosomal protein S25 -0.0737928
MUC16 mucin 16, cell surface associated -0.071861
VIM vimentin -0.0666496
RPL37A ribosomal protein L37a -0.062981
TMSB10 thymosin beta 10 -0.0600551
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0568874
RIOK3 RIO kinase 3 -0.0568827
RPL31 ribosomal protein L31 -0.0564169
NDRG1 N-myc downstream regulated 1 -0.0546708
FTL ferritin, light polypeptide -0.0503853
POTEF POTE ankyrin domain family, member F -0.049365
RPL35A ribosomal protein L35a -0.048736
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0459767
SLC38A1 solute carrier family 38, member 1 -0.0458176
TPT1 tumor protein, translationally-controlled 1 -0.0454671
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0445795
RPS19 ribosomal protein S19 -0.044349
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced -0.0431362
LDHA lactate dehydrogenase A -0.0431248
RPL19 ribosomal protein L19 -0.0424121
KLF5 Kruppel-like factor 5 (intestinal) -0.0416635
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0414493
THOC2 THO complex 2 -0.0405182
NCOA3 nuclear receptor coactivator 3 -0.0389528
RPL15 ribosomal protein L15 -0.0385151
RPLP0 ribosomal protein, large, P0 -0.0384814
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0384582
RPLP1 ribosomal protein, large, P1 -0.0384326
EIF1 eukaryotic translation initiation factor 1 -0.0384322
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0384285
CAPN2 calpain 2, (m/II) large subunit -0.0383697
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0380911
PSD3 pleckstrin and Sec7 domain containing 3 -0.0377907
S100A8 S100 calcium binding protein A8 -0.0377779
RPL23 ribosomal protein L23 -0.0371249
ANXA1 annexin A1 -0.0369605
FDPS farnesyl diphosphate synthase -0.0368828
RPL9 ribosomal protein L9 -0.0364806
RPS13 ribosomal protein S13 -0.0364308
BRWD1 bromodomain and WD repeat domain containing 1 -0.0364131
ATXN2 ataxin 2 -0.0362288
GPBP1 GC-rich promoter binding protein 1 -0.0361891
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0361879
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0358508
CALR calreticulin -0.0356125
RPS29 ribosomal protein S29 -0.0354849
DENND1A DENN/MADD domain containing 1A -0.0352591
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0351669
H3-3B H3.3 histone B -0.0350219
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0340984
SREBF2 sterol regulatory element binding transcription factor 2 -0.0340562
JMJD1C jumonji domain containing 1C -0.0339071
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0337891
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0335807
RPLP2 ribosomal protein, large, P2 -0.0334848
TOP1 topoisomerase (DNA) I -0.0333444
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0333251
TRA2A transformer 2 alpha homolog (Drosophila) -0.0330492
KMT2E lysine (K)-specific methyltransferase 2E -0.0329485
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0327752
MYO6 myosin VI -0.0325718
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0325595
PDE4D phosphodiesterase 4D, cAMP-specific -0.032174
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.032123
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0318742
EZR ezrin -0.0318449
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0317167
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0316116
FOXO3 forkhead box O3 -0.0308787
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0308269
NACA nascent polypeptide-associated complex alpha subunit -0.0308135
HLA-B major histocompatibility complex, class I, B -0.0307151
MYOF myoferlin -0.030639
MTUS1 microtubule associated tumor suppressor 1 -0.0305667
RPS20 ribosomal protein S20 -0.0303103
RPL11 ribosomal protein L11 -0.0301982
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0300902
CLINT1 clathrin interactor 1 -0.029379
RPL12 ribosomal protein L12 -0.0293209
RPS12 ribosomal protein S12 -0.0289419
FNBP1L formin binding protein 1-like -0.0289255
RPL7 ribosomal protein L7 -0.0288329
TMEM41B transmembrane protein 41B -0.0287651
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0285905
ABHD17C abhydrolase domain containing 17C -0.0284617
RPL36A ribosomal protein L36a -0.0283791
GARS1 glycyl-tRNA synthetase 1 -0.0281524
EPSTI1 epithelial stromal interaction 1 (breast) -0.0281122
SMG7 SMG7 nonsense mediated mRNA decay factor -0.0280794