Clonidine (hydrochloride)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.184693
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.172465
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.155545
MYH9 myosin, heavy chain 9, non-muscle 0.0834039
MCL1 myeloid cell leukemia 1 0.0691648
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.062108
TPI1 triosephosphate isomerase 1 0.0615629
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.059471
TPM3 tropomyosin 3 0.0589615
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0587519
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0536935
ELL2 elongation factor, RNA polymerase II, 2 0.0501263
HOMER1 homer scaffolding protein 1 0.0494402
HSPA8 heat shock 70kDa protein 8 0.0492113
INTS6 integrator complex subunit 6 0.0488821
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0484525
KRT18 keratin 18, type I 0.0475691
ZSWIM6 zinc finger, SWIM-type containing 6 0.0475524
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.045164
TPM2 tropomyosin 2 (beta) 0.0427671
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.041528
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0414436
SRSF5 serine/arginine-rich splicing factor 5 0.0404634
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0403763
NAP1L1 nucleosome assembly protein 1-like 1 0.0401053
PLEC plectin 0.0400367
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0394106
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0391079
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0388611
RPL3 ribosomal protein L3 0.0381937
CPNE1 copine I 0.0380391
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0379798
RPL23 ribosomal protein L23 0.0378535
RPS3 ribosomal protein S3 0.0375094
KTN1 kinectin 1 (kinesin receptor) 0.0358818
CTTN cortactin 0.0357731
SFPQ splicing factor proline/glutamine-rich 0.0354261
BRD2 bromodomain containing 2 0.033403
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0333861
ASPH aspartate beta-hydroxylase 0.0332597
DSPP dentin sialophosphoprotein 0.0327439
HSPH1 heat shock 105kDa/110kDa protein 1 0.0319626
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0317645
VCP valosin containing protein 0.0317401
TMSB10 thymosin beta 10 0.0310845
DST dystonin 0.0309091
MYL12B myosin, light chain 12B, regulatory 0.0309064
PTMA prothymosin, alpha 0.0304349
YBX3 Y box binding protein 3 0.0292614
CLTC clathrin, heavy chain (Hc) 0.0290672
ACTG1 actin gamma 1 0.0288316
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0285453
EIF4A1 eukaryotic translation initiation factor 4A1 0.0282087
EIF1 eukaryotic translation initiation factor 1 0.0279403
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0279051
SLC38A2 solute carrier family 38, member 2 0.0278186
NUMA1 nuclear mitotic apparatus protein 1 0.0275445
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0264339
STK4 serine/threonine kinase 4 0.0261805
CEP250 centrosomal protein 250kDa 0.0261793
CLTA clathrin, light chain A 0.0257865
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0256763
STC1 stanniocalcin 1 0.0253824
IER2 immediate early response 2 0.0251498
TRIM59 tripartite motif containing 59 0.0250166
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0249698
PRRC2C proline-rich coiled-coil 2C 0.0249556
NASP nuclear autoantigenic sperm protein (histone-binding) 0.02462
PDLIM5 PDZ and LIM domain 5 0.0241736
SET SET nuclear proto-oncogene 0.0241009
TPT1 tumor protein, translationally-controlled 1 0.023871
RPS8 ribosomal protein S8 0.0237248
STAU1 staufen double-stranded RNA binding protein 1 0.0235991
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0235569
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0233986
BZW1 basic leucine zipper and W2 domains 1 0.0233569
WNK1 WNK lysine deficient protein kinase 1 0.0233219
AHNAK AHNAK nucleoprotein 0.0232028
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0231976
CAVIN1 caveolae associated protein 1 0.0230821
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0228479
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0228165
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0226641
SRSF7 serine/arginine-rich splicing factor 7 0.0223757
PDIA4 protein disulfide isomerase family A, member 4 0.0222823
RPL26 ribosomal protein L26 0.0219934
CHD4 chromodomain helicase DNA binding protein 4 0.0219919
TM4SF1 transmembrane 4 L six family member 1 0.0219853
NONO non-POU domain containing, octamer-binding 0.0219795
RPS21 ribosomal protein S21 0.0218808
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0216865
ERRFI1 ERBB receptor feedback inhibitor 1 0.0216788
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0216612
RPL41 ribosomal protein L41 0.0216429
SPTBN1 spectrin, beta, non-erythrocytic 1 0.021568
RPS2 ribosomal protein S2 0.0213175
AEBP2 AE binding protein 2 0.0212228
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0206007
RPL7A ribosomal protein L7a 0.0205904
RPS17 ribosomal protein S17 0.0202825

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.212735
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0933493
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0851765
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0766271
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0743413
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0724377
KDM2A lysine (K)-specific demethylase 2A -0.0722728
RAD51B RAD51 paralog B -0.0722526
EGR1 early growth response 1 -0.0720025
POTEF POTE ankyrin domain family, member F -0.0673298
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0621086
TMEM165 transmembrane protein 165 -0.0606843
RSF1 remodeling and spacing factor 1 -0.0591964
PDE10A phosphodiesterase 10A -0.0582514
THSD4 thrombospondin, type I, domain containing 4 -0.055795
OSMR oncostatin M receptor -0.0546714
EML4 echinoderm microtubule associated protein like 4 -0.0541638
ZBTB20 zinc finger and BTB domain containing 20 -0.0540061
PTK2 protein tyrosine kinase 2 -0.0520702
BIRC6 baculoviral IAP repeat containing 6 -0.0504176
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0477672
SBF2 SET binding factor 2 -0.0469518
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0465746
NF1 neurofibromin 1 -0.0442498
EXOC4 exocyst complex component 4 -0.0434959
LATS2 large tumor suppressor kinase 2 -0.0434001
TAPBP TAP binding protein (tapasin) -0.042883
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0425462
BBX bobby sox homolog (Drosophila) -0.0420089
USP34 ubiquitin specific peptidase 34 -0.0419397
AFF3 AF4/FMR2 family, member 3 -0.0419138
TAS2R14 taste receptor, type 2, member 14 -0.0413808
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0409923
UBE2H ubiquitin-conjugating enzyme E2H -0.0406
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0388189
SENP6 SUMO1/sentrin specific peptidase 6 -0.0383111
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0379884
IGF2 insulin-like growth factor 2 -0.0379596
BABAM2 BRISC and BRCA1 A complex member 2 -0.037559
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0374933
ATXN1 ataxin 1 -0.0368958
RAB7A RAB7A, member RAS oncogene family -0.0353963
WDPCP WD repeat containing planar cell polarity effector -0.0353248
FTH1 ferritin, heavy polypeptide 1 -0.0351573
SMAD3 SMAD family member 3 -0.034902
ZNF292 zinc finger protein 292 -0.0348522
PHF21A PHD finger protein 21A -0.0346881
AKAP9 A kinase (PRKA) anchor protein 9 -0.0344957
BSG basigin (Ok blood group) -0.0342913
TFPI2 tissue factor pathway inhibitor 2 -0.0341338
FCHSD2 FCH and double SH3 domains 2 -0.0340032
BCAS3 breast carcinoma amplified sequence 3 -0.0335221
GATAD2B GATA zinc finger domain containing 2B -0.0334675
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0330796
EGFR epidermal growth factor receptor -0.0329569
SETD5 SET domain containing 5 -0.0324478
ATP5F1B ATP synthase F1 subunit beta -0.032284
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0320756
EPAS1 endothelial PAS domain protein 1 -0.0320642
THOC2 THO complex 2 -0.0317381
ZMYND8 zinc finger, MYND-type containing 8 -0.031402
NOP58 NOP58 ribonucleoprotein -0.0313353
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0306337
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0306157
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0305288
NCOR1 nuclear receptor corepressor 1 -0.030401
PFN1 profilin 1 -0.030287
COG5 component of oligomeric golgi complex 5 -0.0301106
CAMKMT calmodulin-lysine N-methyltransferase -0.0300874
TXNRD1 thioredoxin reductase 1 -0.0298864
SRPK1 SRSF protein kinase 1 -0.0298485
MMP12 matrix metallopeptidase 12 -0.029583
NCOA7 nuclear receptor coactivator 7 -0.0295753
HMGA2 high mobility group AT-hook 2 -0.0295742
NBAS neuroblastoma amplified sequence -0.0293635
WASF2 WAS protein family, member 2 -0.0288953
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 -0.0285524
KMT2A lysine (K)-specific methyltransferase 2A -0.0282927
RNF38 ring finger protein 38 -0.0282814
GOLGA4 golgin A4 -0.0281809
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0281782
COPA coatomer protein complex, subunit alpha -0.0278492
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.02764
KCMF1 potassium channel modulatory factor 1 -0.0274144
TFG TRK-fused gene -0.0274128
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0272988
HMGA1 high mobility group AT-hook 1 -0.0272352
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0271609
PDIA3 protein disulfide isomerase family A, member 3 -0.0269602
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0262413
PLSCR1 phospholipid scramblase 1 -0.02617
EHBP1 EH domain binding protein 1 -0.0261515
CCNL1 cyclin L1 -0.0256514
TRIP12 thyroid hormone receptor interactor 12 -0.025624
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0256101
ATXN2 ataxin 2 -0.0255376
ICAM1 intercellular adhesion molecule 1 -0.025504
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0254885
RAP1B RAP1B, member of RAS oncogene family -0.0251119
FOXJ3 forkhead box J3 -0.0250253