Clonidine (hydrochloride)_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL3A1 collagen, type III, alpha 1 0.0694617
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0500507
KDM3A lysine (K)-specific demethylase 3A 0.043935
TENM3 teneurin transmembrane protein 3 0.041587
EXT1 exostosin glycosyltransferase 1 0.0368992
ANKRD12 ankyrin repeat domain 12 0.0368567
MED13L mediator complex subunit 13-like 0.0365247
MYH9 myosin, heavy chain 9, non-muscle 0.0350319
MED12L mediator complex subunit 12-like 0.0346626
SQSTM1 sequestosome 1 0.0339899
PTMA prothymosin, alpha 0.032261
USP53 ubiquitin specific peptidase 53 0.0313148
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0312591
PCLO piccolo presynaptic cytomatrix protein 0.0303998
H1-0 H1.0 linker histone 0.0294766
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0291818
MBD5 methyl-CpG binding domain protein 5 0.029051
LYST lysosomal trafficking regulator 0.0289045
SEPTIN7 septin 7 0.0287592
EPHA5 EPH receptor A5 0.0284311
DIDO1 death inducer-obliterator 1 0.0273863
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0272092
SSBP3 single stranded DNA binding protein 3 0.0260054
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0255042
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0254419
ZNF385D zinc finger protein 385D 0.0253139
ILF3 interleukin enhancer binding factor 3, 90kDa 0.0248248
PEG10 paternally expressed 10 0.0244958
ADGRB3 adhesion G protein-coupled receptor B3 0.0243509
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0242769
HMCN1 hemicentin 1 0.0237683
UTRN utrophin 0.0236095
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0235279
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0234081
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0232196
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0229817
ASPH aspartate beta-hydroxylase 0.022528
PCBP3 poly(rC) binding protein 3 0.0223401
SAMD11 sterile alpha motif domain containing 11 0.0221552
FMNL2 formin-like 2 0.0216701
PHF3 PHD finger protein 3 0.0213953
VCL vinculin 0.021167
RPL37A ribosomal protein L37a 0.0209482
FIP1L1 factor interacting with PAPOLA and CPSF1 0.0208898
CCDC91 coiled-coil domain containing 91 0.0207884
FBXL17 F-box and leucine-rich repeat protein 17 0.0205719
H1-4 H1.4 linker histone, cluster member 0.0205574
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.0205572
TMSB4X thymosin beta 4, X-linked 0.0200574
RNF216 ring finger protein 216 0.0199691
PGPEP1L pyroglutamyl-peptidase I-like 0.0199521
TPT1 tumor protein, translationally-controlled 1 0.0196285
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.0196231
AKAP12 A kinase (PRKA) anchor protein 12 0.0196188
RICTOR RPTOR independent companion of MTOR, complex 2 0.0195255
DNAH14 dynein, axonemal, heavy chain 14 0.0194807
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0192825
CAVIN1 caveolae associated protein 1 0.0192132
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0190553
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0189931
TLK1 tousled-like kinase 1 0.0189731
CCDC138 coiled-coil domain containing 138 0.01895
NBEA neurobeachin 0.0189385
PHF14 PHD finger protein 14 0.0188727
SRP54 signal recognition particle 54kDa 0.018785
KIF1B kinesin family member 1B 0.0187034
RRBP1 ribosome binding protein 1 0.0185952
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0185259
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0183305
AGO3 argonaute RISC catalytic component 3 0.0182004
PSD3 pleckstrin and Sec7 domain containing 3 0.0181912
PRR16 proline rich 16 0.018058
LPGAT1 lysophosphatidylglycerol acyltransferase 1 0.0178275
RAD21 RAD21 homolog (S. pombe) 0.0177597
ATP6V1C1 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 0.0177243
NIPBL Nipped-B homolog (Drosophila) 0.0177123
TCOF1 Treacher Collins-Franceschetti syndrome 1 0.0176358
AFF1 AF4/FMR2 family, member 1 0.0176111
OTOGL otogelin-like 0.017583
CTNND1 catenin (cadherin-associated protein), delta 1 0.0174702
IGFBP3 insulin-like growth factor binding protein 3 0.0173978
PTPRF protein tyrosine phosphatase, receptor type, F 0.0173839
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0173533
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0172108
KTN1 kinectin 1 (kinesin receptor) 0.017202
ZNF638 zinc finger protein 638 0.0171631
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0170896
TPTE transmembrane phosphatase with tensin homology 0.0170607
GPC6 glypican 6 0.0169485
IVNS1ABP influenza virus NS1A binding protein 0.0169421
TOP1 topoisomerase (DNA) I 0.0168791
DSCAM Down syndrome cell adhesion molecule 0.0168738
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0167317
FOXN3 forkhead box N3 0.0166355
DCAF6 DDB1 and CUL4 associated factor 6 0.0166227
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0166066
UVRAG UV radiation resistance associated 0.0164268
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0164155
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0163291
GLS2 glutaminase 2 (liver, mitochondrial) 0.0163107

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.1371
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0909878
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0837067
TMSB10 thymosin beta 10 -0.082788
ADGRL2 adhesion G protein-coupled receptor L2 -0.079926
NRG1 neuregulin 1 -0.0795026
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0764956
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0747879
ITGAV integrin, alpha V -0.0612777
PGAP1 post-GPI attachment to proteins 1 -0.0608775
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0565277
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0554602
PLPP1 phospholipid phosphatase 1 -0.0535774
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0531489
ADGRV1 adhesion G protein-coupled receptor V1 -0.0529447
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0527947
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0521896
RPS6 ribosomal protein S6 -0.0500394
PCDH9 protocadherin 9 -0.0490851
PHIP pleckstrin homology domain interacting protein -0.0473415
TSC22D2 TSC22 domain family, member 2 -0.0468049
PRTG protogenin -0.046594
CHD1 chromodomain helicase DNA binding protein 1 -0.0451365
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0442057
POTEF POTE ankyrin domain family, member F -0.0440904
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0426993
ACTG1 actin gamma 1 -0.0426099
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0421542
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0413552
RPS16 ribosomal protein S16 -0.0406566
ZFPM2 zinc finger protein, FOG family member 2 -0.0406477
RPL11 ribosomal protein L11 -0.0394739
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0387605
PARD3B par-3 family cell polarity regulator beta -0.0384674
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0384114
EEF2 eukaryotic translation elongation factor 2 -0.0380235
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0362767
FIGN fidgetin -0.0353025
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0349051
CCN2 cellular communication network factor 2 -0.0341752
NTM neurotrimin -0.0332692
CENPE centromere protein E, 312kDa -0.0331658
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0329525
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0329208
TUBA1B tubulin, alpha 1b -0.0323333
PDIA3 protein disulfide isomerase family A, member 3 -0.0320382
RBM20 RNA binding motif protein 20 -0.0319937
TNRC6B trinucleotide repeat containing 6B -0.0319931
ANK2 ankyrin 2, neuronal -0.031954
PBX3 pre-B-cell leukemia homeobox 3 -0.0317613
MDK midkine (neurite growth-promoting factor 2) -0.0316881
DACH1 dachshund family transcription factor 1 -0.0315841
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0311538
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0307324
FOXP2 forkhead box P2 -0.0306883
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0302991
MKI67 marker of proliferation Ki-67 -0.0302452
RAB7A RAB7A, member RAS oncogene family -0.0295625
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0295529
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0291918
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0291345
KCTD16 potassium channel tetramerization domain containing 16 -0.0289412
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0289184
HSPB1 heat shock 27kDa protein 1 -0.0288828
KPNB1 karyopherin (importin) beta 1 -0.028532
CBX3 chromobox homolog 3 -0.0281163
VIM vimentin -0.0280486
RTN4 reticulon 4 -0.0280035
SETD5 SET domain containing 5 -0.0277702
ATP5F1B ATP synthase F1 subunit beta -0.0276927
PFN1 profilin 1 -0.0276574
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0272018
DMD dystrophin -0.0268291
AKAP13 A kinase (PRKA) anchor protein 13 -0.0267899
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -0.0267757
ISG15 ISG15 ubiquitin-like modifier -0.0267145
TUT4 terminal uridylyl transferase 4 -0.0263135
NUP153 nucleoporin 153kDa -0.0261666
LRRC4C leucine rich repeat containing 4C -0.0261002
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0259823
SIK2 salt-inducible kinase 2 -0.0259357
SREBF2 sterol regulatory element binding transcription factor 2 -0.0258039
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0256096
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0253954
WASF2 WAS protein family, member 2 -0.0248826
CKAP2 cytoskeleton associated protein 2 -0.0248403
ZFAND3 zinc finger, AN1-type domain 3 -0.0247076
ARHGAP15 Rho GTPase activating protein 15 -0.024671
RPL30 ribosomal protein L30 -0.0245536
NACA nascent polypeptide-associated complex alpha subunit -0.0244197
EMP1 epithelial membrane protein 1 -0.0242725
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5 -0.0242266
THBS1 thrombospondin 1 -0.024107
SRPK2 SRSF protein kinase 2 -0.0240602
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0237703
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0236987
BAZ1B bromodomain adjacent to zinc finger domain, 1B -0.0235896
KDM6B lysine (K)-specific demethylase 6B -0.0235896
TCF12 transcription factor 12 -0.0235245
CSRNP3 cysteine-serine-rich nuclear protein 3 -0.0233044