Clonidine (hydrochloride)_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clonidine (hydrochloride) perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clonidine (hydrochloride)_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAT1 FAT atypical cadherin 1 0.0891184
ANXA1 annexin A1 0.0759299
DSPP dentin sialophosphoprotein 0.0646602
RAD51B RAD51 paralog B 0.0640491
NCEH1 neutral cholesterol ester hydrolase 1 0.0611557
LMO7 LIM domain 7 0.0601259
MYH9 myosin, heavy chain 9, non-muscle 0.0569538
EGFR epidermal growth factor receptor 0.0553029
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0512036
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0470098
LAMA4 laminin, alpha 4 0.0466577
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0458701
RPL3 ribosomal protein L3 0.0457398
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0448822
LAMC2 laminin, gamma 2 0.0437366
HSPA8 heat shock 70kDa protein 8 0.0418851
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0415855
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0414329
SEPTIN9 septin 9 0.041246
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0395084
DOCK5 dedicator of cytokinesis 5 0.0373121
ITPRID2 ITPR interacting domain containing 2 0.0358574
BCL2L1 BCL2-like 1 0.035229
EHBP1 EH domain binding protein 1 0.0311461
CTSB cathepsin B 0.0309773
VCL vinculin 0.0308823
OSBPL10 oxysterol binding protein-like 10 0.0308724
CPOX coproporphyrinogen oxidase 0.0303107
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0300658
LAMB3 laminin, beta 3 0.0289751
H1-4 H1.4 linker histone, cluster member 0.0288763
EPHA2 EPH receptor A2 0.0283595
NTSR1 neurotensin receptor 1 (high affinity) 0.0281178
FHL2 four and a half LIM domains 2 0.0280867
FBXL17 F-box and leucine-rich repeat protein 17 0.0266854
DST dystonin 0.025981
ATXN1 ataxin 1 0.0258273
CLDND1 claudin domain containing 1 0.0256236
RPS2 ribosomal protein S2 0.0251671
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0250526
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0247879
GCLC glutamate-cysteine ligase, catalytic subunit 0.0245693
ZBTB20 zinc finger and BTB domain containing 20 0.024488
MYOF myoferlin 0.0241155
SERINC5 serine incorporator 5 0.0240099
SRRM2 serine/arginine repetitive matrix 2 0.0224032
MBNL1 muscleblind-like splicing regulator 1 0.0222285
PRELID2 PRELI domain containing 2 0.0219819
MACROD2 MACRO domain containing 2 0.0219059
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0217751
IER2 immediate early response 2 0.0216299
H1-2 H1.2 linker histone, cluster member 0.0213735
PDE4D phosphodiesterase 4D, cAMP-specific 0.0212336
PATJ PATJ crumbs cell polarity complex component 0.0210521
ADGRA3 adhesion G protein-coupled receptor A3 0.0206563
PLAUR plasminogen activator, urokinase receptor 0.020646
PRKN parkin RBR E3 ubiquitin protein ligase 0.0203744
RPL4 ribosomal protein L4 0.0202798
YME1L1 YME1-like 1 ATPase 0.020261
RSL1D1 ribosomal L1 domain containing 1 0.0202211
ATL2 atlastin GTPase 2 0.0201702
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0201252
ZNF146 zinc finger protein 146 0.0200238
SAMD5 sterile alpha motif domain containing 5 0.0198799
SLC30A10 solute carrier family 30, member 10 0.0198193
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 0.0198095
RPL41 ribosomal protein L41 0.0197011
TTC17 tetratricopeptide repeat domain 17 0.0194083
DOCK1 dedicator of cytokinesis 1 0.0193578
DSG2 desmoglein 2 0.0192116
EFNA5 ephrin-A5 0.0192
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0191037
PYGL phosphorylase, glycogen, liver 0.0188596
MBD5 methyl-CpG binding domain protein 5 0.0187027
CEP290 centrosomal protein 290kDa 0.0186689
TENM3 teneurin transmembrane protein 3 0.0185923
SPTLC2 serine palmitoyltransferase, long chain base subunit 2 0.0184877
DPY19L1 dpy-19-like 1 (C. elegans) 0.0183023
EFNB2 ephrin-B2 0.0182793
TRIM44 tripartite motif containing 44 0.0181035
FTO fat mass and obesity associated 0.0179563
TPT1 tumor protein, translationally-controlled 1 0.0178475
KLC1 kinesin light chain 1 0.0178286
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 0.0177877
HDAC4 histone deacetylase 4 0.0176944
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.0175969
ECT2 epithelial cell transforming 2 0.0174356
SAMD12 sterile alpha motif domain containing 12 0.017197
SAMD4A sterile alpha motif domain containing 4A 0.0171327
GOLGB1 golgin B1 0.0171273
NUMA1 nuclear mitotic apparatus protein 1 0.017123
SFTPA2 surfactant protein A2 0.0169092
GNAT3 guanine nucleotide binding protein, alpha transducing 3 0.0167586
ARRDC3 arrestin domain containing 3 0.0166988
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.016588
TES testin LIM domain protein 0.0165534
EVA1C eva-1 homolog C (C. elegans) 0.0165115
NT5E 5'-nucleotidase, ecto (CD73) 0.0164878
EXOC4 exocyst complex component 4 0.0162073
TPI1 triosephosphate isomerase 1 0.0161909

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.166135
PTMA prothymosin, alpha -0.135548
EEF2 eukaryotic translation elongation factor 2 -0.124868
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.12269
TMSB10 thymosin beta 10 -0.109508
FRAS1 Fraser extracellular matrix complex subunit 1 -0.106433
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.10628
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.104871
ACTG1 actin gamma 1 -0.0957478
EGR1 early growth response 1 -0.0951629
UBC ubiquitin C -0.0798943
PCBP2 poly(rC) binding protein 2 -0.0791434
NDRG1 N-myc downstream regulated 1 -0.0789407
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.078843
GOLGA4 golgin A4 -0.0775716
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0728232
RPS27A ribosomal protein S27a -0.0694787
AREG amphiregulin -0.0665794
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0658492
HILPDA hypoxia inducible lipid droplet-associated -0.0637778
RPS6 ribosomal protein S6 -0.0636661
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0623332
RPL5 ribosomal protein L5 -0.061048
COG5 component of oligomeric golgi complex 5 -0.0606897
RREB1 ras responsive element binding protein 1 -0.0599988
RBM25 RNA binding motif protein 25 -0.0592952
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0560736
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0556385
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.054281
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0535241
ESYT2 extended synaptotagmin-like protein 2 -0.0518349
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0505009
RPL37A ribosomal protein L37a -0.0497882
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0474662
S100A6 S100 calcium binding protein A6 -0.0473179
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0470581
RPS29 ribosomal protein S29 -0.0470078
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0459177
IER3 immediate early response 3 -0.0444153
LDHA lactate dehydrogenase A -0.0442724
WAC WW domain containing adaptor with coiled-coil -0.0442026
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0441106
FTH1 ferritin, heavy polypeptide 1 -0.0435353
SBF2 SET binding factor 2 -0.0429093
RAB6A RAB6A, member RAS oncogene family -0.0425077
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0422443
ENO1 enolase 1, (alpha) -0.0420642
SETD5 SET domain containing 5 -0.0417788
BIRC6 baculoviral IAP repeat containing 6 -0.041555
KMT2E lysine (K)-specific methyltransferase 2E -0.0414839
POTEF POTE ankyrin domain family, member F -0.041389
RCOR1 REST corepressor 1 -0.0409365
ITGB4 integrin, beta 4 -0.0405346
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0403624
RPS8 ribosomal protein S8 -0.0402009
RPL35A ribosomal protein L35a -0.03999
RPS3 ribosomal protein S3 -0.0397587
ZNF207 zinc finger protein 207 -0.0396979
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0395426
RAB7A RAB7A, member RAS oncogene family -0.0394706
RPS24 ribosomal protein S24 -0.0390336
EZR ezrin -0.0384518
PUM2 pumilio RNA-binding family member 2 -0.0384299
TOP1 topoisomerase (DNA) I -0.0384148
BRWD1 bromodomain and WD repeat domain containing 1 -0.0379086
SREBF2 sterol regulatory element binding transcription factor 2 -0.0375821
MTDH metadherin -0.0371131
HMGA1 high mobility group AT-hook 1 -0.037084
ANXA11 annexin A11 -0.0370413
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0368051
FERMT1 fermitin family member 1 -0.0367589
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0363753
KDM4B lysine (K)-specific demethylase 4B -0.0356832
SCFD1 sec1 family domain containing 1 -0.0356502
IGF2 insulin-like growth factor 2 -0.035599
NEMF nuclear export mediator factor -0.0353137
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0350686
KMT2C lysine (K)-specific methyltransferase 2C -0.0344004
RPS25 ribosomal protein S25 -0.0338895
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.033818
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0337463
NAV2 neuron navigator 2 -0.0336836
ATP5F1B ATP synthase F1 subunit beta -0.0329577
RPL9 ribosomal protein L9 -0.0328293
ANXA2 annexin A2 -0.032268
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0321635
RBM33 RNA binding motif protein 33 -0.0318315
ANKRD12 ankyrin repeat domain 12 -0.0316587
MSI2 musashi RNA-binding protein 2 -0.031648
CBX3 chromobox homolog 3 -0.0311317
RBM39 RNA binding motif protein 39 -0.0310233
S100A10 S100 calcium binding protein A10 -0.0309575
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 -0.0308926
FMNL2 formin-like 2 -0.0308235
STRN3 striatin, calmodulin binding protein 3 -0.0307826
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0306965
RPL36 ribosomal protein L36 -0.0306625
GSK3B glycogen synthase kinase 3 beta -0.0305283
HDAC2 histone deacetylase 2 -0.0304003
IGFBP3 insulin-like growth factor binding protein 3 -0.0299954