Clopidogrel_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clopidogrel perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clopidogrel_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.0950051
TRIO trio Rho guanine nucleotide exchange factor 0.0645106
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0600923
SPAG9 sperm associated antigen 9 0.0507133
SOD2 superoxide dismutase 2, mitochondrial 0.0435415
LDHA lactate dehydrogenase A 0.042493
ATP13A3 ATPase type 13A3 0.0390211
CADM1 cell adhesion molecule 1 0.0359632
ZNF292 zinc finger protein 292 0.0327688
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0306026
RASA2 RAS p21 protein activator 2 0.0302778
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0301154
CAMTA1 calmodulin binding transcription activator 1 0.0299014
MYH9 myosin, heavy chain 9, non-muscle 0.0297309
YBX1 Y box binding protein 1 0.0286318
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0274343
OGA O-GlcNAcase 0.0266127
MRTFA myocardin related transcription factor A 0.0262146
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0258152
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.025793
RLF rearranged L-myc fusion 0.0256503
ELL2 elongation factor, RNA polymerase II, 2 0.025333
RPS8 ribosomal protein S8 0.0251962
SQLE squalene epoxidase 0.0240413
FNDC3B fibronectin type III domain containing 3B 0.0239513
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0237408
RPS12 ribosomal protein S12 0.0237245
SMAD3 SMAD family member 3 0.0236093
ZFAND3 zinc finger, AN1-type domain 3 0.02342
MT1X metallothionein 1X 0.0229218
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0221516
RPS3 ribosomal protein S3 0.0221451
ANXA2 annexin A2 0.0219614
RAD21 RAD21 homolog (S. pombe) 0.0218367
FMNL2 formin-like 2 0.0218179
ARRDC3 arrestin domain containing 3 0.0207807
NAP1L1 nucleosome assembly protein 1-like 1 0.0206369
DLG1 discs, large homolog 1 (Drosophila) 0.0204479
TNIP1 TNFAIP3 interacting protein 1 0.0201929
KMT2E lysine (K)-specific methyltransferase 2E 0.0197946
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0197668
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0194235
CXCL8 chemokine (C-X-C motif) ligand 8 0.0193529
TFG TRK-fused gene 0.0190633
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0187858
EIF1 eukaryotic translation initiation factor 1 0.0187629
GOLGA4 golgin A4 0.0186687
ADAM17 ADAM metallopeptidase domain 17 0.0186601
WSB1 WD repeat and SOCS box containing 1 0.0185242
RPL7 ribosomal protein L7 0.0185103
CAVIN1 caveolae associated protein 1 0.0183813
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0181761
CLINT1 clathrin interactor 1 0.0181601
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0177131
RPL26 ribosomal protein L26 0.0174497
BHLHE40 basic helix-loop-helix family, member e40 0.0174254
KDM3A lysine (K)-specific demethylase 3A 0.017311
RIPK2 receptor-interacting serine-threonine kinase 2 0.0170088
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0169682
UBA6 ubiquitin-like modifier activating enzyme 6 0.0169149
BIRC6 baculoviral IAP repeat containing 6 0.0168876
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0168389
USP3 ubiquitin specific peptidase 3 0.0168288
RPL12 ribosomal protein L12 0.0166291
HIPK2 homeodomain interacting protein kinase 2 0.0164385
NAMPT nicotinamide phosphoribosyltransferase 0.0161377
RACK1 receptor for activated C kinase 1 0.0160161
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0160054
TM4SF1 transmembrane 4 L six family member 1 0.0158682
PTK2 protein tyrosine kinase 2 0.0156249
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0156226
QKI QKI, KH domain containing, RNA binding 0.0155968
RPL19 ribosomal protein L19 0.0155716
TRA2A transformer 2 alpha homolog (Drosophila) 0.0153819
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0153787
RPLP1 ribosomal protein, large, P1 0.0153167
HIP1 huntingtin interacting protein 1 0.0149558
TSC22D2 TSC22 domain family, member 2 0.0147551
MARCHF6 membrane associated ring-CH-type finger 6 0.0145406
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0145037
ESYT2 extended synaptotagmin-like protein 2 0.0143272
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 0.0143093
CALR calreticulin 0.0143001
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0141119
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0139469
RPL30 ribosomal protein L30 0.0138436
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) 0.0138177
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0137496
NKTR natural killer cell triggering receptor 0.0135273
PRRC1 proline-rich coiled-coil 1 0.0134691
FAM13B family with sequence similarity 13, member B 0.0132547
B2M beta-2-microglobulin 0.0131645
KIF1B kinesin family member 1B 0.0131617
NAV2 neuron navigator 2 0.0131438
RSRP1 arginine/serine-rich protein 1 0.0130934
RHEB Ras homolog enriched in brain 0.0129731
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0129452
TMSB4X thymosin beta 4, X-linked 0.0129362
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0129038
ELP2 elongator acetyltransferase complex subunit 2 0.0127964

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.307373
FN1 fibronectin 1 -0.17135
COL1A1 collagen, type I, alpha 1 -0.144052
CDH13 cadherin 13 -0.0823563
COL1A2 collagen, type I, alpha 2 -0.0734784
TGFBI transforming growth factor, beta-induced, 68kDa -0.058608
COL6A3 collagen, type VI, alpha 3 -0.0562966
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0539253
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0504238
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0488156
VEGFA vascular endothelial growth factor A -0.0470012
NDRG1 N-myc downstream regulated 1 -0.0467865
NKAIN3 Na+/K+ transporting ATPase interacting 3 -0.0452248
PSD3 pleckstrin and Sec7 domain containing 3 -0.0426328
FBN1 fibrillin 1 -0.0412958
DPYD dihydropyrimidine dehydrogenase -0.041205
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0395288
COL5A1 collagen, type V, alpha 1 -0.034743
F3 coagulation factor III (thromboplastin, tissue factor) -0.0338449
GLIS3 GLIS family zinc finger 3 -0.0334935
TRPS1 trichorhinophalangeal syndrome I -0.0331793
VCAN versican -0.0330623
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0326721
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.032226
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0307968
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0291846
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.029013
TMSB10 thymosin beta 10 -0.0288744
ACTG1 actin gamma 1 -0.0276747
ZBTB20 zinc finger and BTB domain containing 20 -0.0268918
ASPH aspartate beta-hydroxylase -0.026527
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0262384
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0256407
CALD1 caldesmon 1 -0.0252137
COL6A1 collagen, type VI, alpha 1 -0.025084
PDE4D phosphodiesterase 4D, cAMP-specific -0.0231965
CLMP CXADR-like membrane protein -0.0226527
MAP1B microtubule-associated protein 1B -0.0220208
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0220065
NRP1 neuropilin 1 -0.0201134
POTEF POTE ankyrin domain family, member F -0.019945
FOXP1 forkhead box P1 -0.0198807
HLA-B major histocompatibility complex, class I, B -0.0195727
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0195656
SLC38A2 solute carrier family 38, member 2 -0.0189702
IL6 interleukin 6 -0.017605
ADAM12 ADAM metallopeptidase domain 12 -0.0175152
COL6A2 collagen, type VI, alpha 2 -0.0173531
PDIA3 protein disulfide isomerase family A, member 3 -0.0172793
NAV1 neuron navigator 1 -0.0167685
GOLGB1 golgin B1 -0.0167616
SORBS2 sorbin and SH3 domain containing 2 -0.0167012
COL7A1 collagen, type VII, alpha 1 -0.0163854
ZFPM2 zinc finger protein, FOG family member 2 -0.016291
EGR1 early growth response 1 -0.0160624
ABI3BP ABI family, member 3 (NESH) binding protein -0.0159216
CNTN5 contactin 5 -0.0156824
NALF1 NALCN channel auxiliary factor 1 -0.0156071
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0152988
BNC2 basonuclin 2 -0.0152155
ARL4C ADP-ribosylation factor-like 4C -0.0150331
MAML2 mastermind-like 2 (Drosophila) -0.01461
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0145583
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -0.0144623
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0143839
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0139209
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0138273
TPM4 tropomyosin 4 -0.0138016
TENM3 teneurin transmembrane protein 3 -0.0131873
CCDC80 coiled-coil domain containing 80 -0.0130787
CTSB cathepsin B -0.0129967
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0128578
FTH1 ferritin, heavy polypeptide 1 -0.0127719
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0126272
HLA-A major histocompatibility complex, class I, A -0.0125821
CUX1 cut-like homeobox 1 -0.012519
EGFR epidermal growth factor receptor -0.0124586
COL8A1 collagen, type VIII, alpha 1 -0.0123058
HMCN1 hemicentin 1 -0.0122759
LTBP1 latent transforming growth factor beta binding protein 1 -0.0122262
OSMR oncostatin M receptor -0.012122
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0119909
PTPRG protein tyrosine phosphatase, receptor type, G -0.0119799
SETBP1 SET binding protein 1 -0.0119489
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0118806
PRKCA protein kinase C, alpha -0.0117989
AFF3 AF4/FMR2 family, member 3 -0.0117438
VCL vinculin -0.0117241
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.011666
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0112622
SOX4 SRY (sex determining region Y)-box 4 -0.0112219
RND3 Rho family GTPase 3 -0.011093
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0109496
LY6E lymphocyte antigen 6 complex, locus E -0.010903
ENO2 enolase 2 (gamma, neuronal) -0.0109008
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0107378
NREP neuronal regeneration related protein -0.0106137
LOX lysyl oxidase -0.0102832
C1R complement component 1, r subcomponent -0.0101665
CD99 CD99 molecule -0.0100591