Clopidogrel_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clopidogrel perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clopidogrel_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.161491
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.115765
ERRFI1 ERBB receptor feedback inhibitor 1 0.112828
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0989
ASPH aspartate beta-hydroxylase 0.0959447
SAMD4A sterile alpha motif domain containing 4A 0.0938725
GMDS GDP-mannose 4,6-dehydratase 0.0777063
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0744281
ATXN1 ataxin 1 0.0732086
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0710763
ENO1 enolase 1, (alpha) 0.0684402
RERE arginine-glutamic acid dipeptide (RE) repeats 0.066382
FNDC3B fibronectin type III domain containing 3B 0.0645527
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0642136
EHBP1 EH domain binding protein 1 0.0632563
FMNL2 formin-like 2 0.0618267
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0577184
DSPP dentin sialophosphoprotein 0.0552053
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0542618
GPC6 glypican 6 0.0529119
PDLIM5 PDZ and LIM domain 5 0.0524829
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0519241
DDIT4 DNA-damage-inducible transcript 4 0.050326
INTS6 integrator complex subunit 6 0.0495805
LRMDA leucine rich melanocyte differentiation associated 0.0485463
SOD2 superoxide dismutase 2, mitochondrial 0.0460884
TF transferrin 0.0460499
MAML2 mastermind-like 2 (Drosophila) 0.0457505
FRMD5 FERM domain containing 5 0.044663
ARFGEF3 ARFGEF family member 3 0.0439155
DST dystonin 0.0420959
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0410261
EXT1 exostosin glycosyltransferase 1 0.0403945
TRIO trio Rho guanine nucleotide exchange factor 0.0385945
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0384127
RAD51B RAD51 paralog B 0.0377723
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0377332
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0374458
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0360963
PEG3 paternally expressed 3 0.0360328
LDHA lactate dehydrogenase A 0.035937
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0356514
MACF1 microtubule-actin crosslinking factor 1 0.0353255
ZBTB20 zinc finger and BTB domain containing 20 0.0345197
SDC4 syndecan 4 0.0343945
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0343934
MSI2 musashi RNA-binding protein 2 0.0343429
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0338143
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0335345
FAM107B family with sequence similarity 107, member B 0.0325922
PRELID2 PRELI domain containing 2 0.0319094
DTNA dystrobrevin, alpha 0.0318844
KDM4C lysine (K)-specific demethylase 4C 0.0316141
H1-0 H1.0 linker histone 0.0307331
KIAA1217 KIAA1217 0.0299365
ATP10A ATPase, class V, type 10A 0.029853
PLIN2 perilipin 2 0.0297162
TNS1 tensin 1 0.0296459
AFDN afadin, adherens junction formation factor 0.0295383
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0289862
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0285504
FLNB filamin B, beta 0.0284241
MARCKS myristoylated alanine-rich protein kinase C substrate 0.028187
DSCAM Down syndrome cell adhesion molecule 0.0281857
NDRG1 N-myc downstream regulated 1 0.0280936
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0278845
MYH9 myosin, heavy chain 9, non-muscle 0.0277402
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0272442
LPP LIM domain containing preferred translocation partner in lipoma 0.0272114
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0270464
NPAS2 neuronal PAS domain protein 2 0.0261767
SLC38A2 solute carrier family 38, member 2 0.026088
ZHX2 zinc fingers and homeoboxes 2 0.0260613
RNF213 ring finger protein 213 0.0256619
SESTD1 SEC14 and spectrin domains 1 0.0255208
CLIC4 chloride intracellular channel 4 0.0248104
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0246594
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0245679
HPCAL1 hippocalcin-like 1 0.0244027
TBC1D22A TBC1 domain family, member 22A 0.0242657
CANX calnexin 0.0242301
ZNF638 zinc finger protein 638 0.0239771
KDM4B lysine (K)-specific demethylase 4B 0.0238692
HOOK2 hook microtubule-tethering protein 2 0.0236082
NAP1L1 nucleosome assembly protein 1-like 1 0.023534
KDM3A lysine (K)-specific demethylase 3A 0.0234535
RPS12 ribosomal protein S12 0.0233086
PLXDC2 plexin domain containing 2 0.0232375
IGF1R insulin-like growth factor 1 receptor 0.0230735
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0228623
DENND1A DENN/MADD domain containing 1A 0.0226653
DOCK4 dedicator of cytokinesis 4 0.0226502
PSD3 pleckstrin and Sec7 domain containing 3 0.022204
MTSS1 metastasis suppressor 1 0.0217624
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0217179
PGK1 phosphoglycerate kinase 1 0.0212247
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0210054
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0209466
USP34 ubiquitin specific peptidase 34 0.0208806
RUNX1 runt-related transcription factor 1 0.0208306

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.473437
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.186239
APOB apolipoprotein B -0.119407
C3 complement component 3 -0.106205
NKD1 naked cuticle homolog 1 (Drosophila) -0.054887
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0527126
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0517894
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0413661
ITGAV integrin, alpha V -0.040117
EGR1 early growth response 1 -0.0398464
BCL2L1 BCL2-like 1 -0.0327111
LMCD1 LIM and cysteine-rich domains 1 -0.032312
A2M alpha-2-macroglobulin -0.0302535
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0293512
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0247526
FTH1 ferritin, heavy polypeptide 1 -0.0244024
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0226832
MRTFA myocardin related transcription factor A -0.0225751
CFB complement factor B -0.0225353
ZNF644 zinc finger protein 644 -0.0222855
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0213083
NRIP1 nuclear receptor interacting protein 1 -0.0205555
VCL vinculin -0.0203328
RPL34 ribosomal protein L34 -0.0198249
ARHGAP9 Rho GTPase activating protein 9 -0.0195868
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0195668
FN1 fibronectin 1 -0.0195029
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18 -0.0191342
ACSS3 acyl-CoA synthetase short-chain family member 3 -0.0189041
PLAC8 placenta-specific 8 -0.0184984
TGFBI transforming growth factor, beta-induced, 68kDa -0.0181579
TXNRD1 thioredoxin reductase 1 -0.0181038
TM4SF1 transmembrane 4 L six family member 1 -0.0176657
RPL35A ribosomal protein L35a -0.0174451
APOA2 apolipoprotein A-II -0.0173802
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.0170367
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0168143
ELL2 elongation factor, RNA polymerase II, 2 -0.0167523
UBASH3B ubiquitin associated and SH3 domain containing B -0.0165666
MBNL3 muscleblind-like splicing regulator 3 -0.0160205
RTN4 reticulon 4 -0.0153772
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0152954
KIF5B kinesin family member 5B -0.0152769
YME1L1 YME1-like 1 ATPase -0.0149276
LYZ lysozyme -0.0146712
GCC2 GRIP and coiled-coil domain containing 2 -0.0144847
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0144349
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0141763
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.014053
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.013943
ADNP activity-dependent neuroprotector homeobox -0.0137614
SLC23A1 solute carrier family 23 (ascorbic acid transporter), member 1 -0.0134767
KLHL5 kelch-like family member 5 -0.0132528
FCHSD2 FCH and double SH3 domains 2 -0.0131201
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0131185
SAMD8 sterile alpha motif domain containing 8 -0.0130885
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0130073
TPM1 tropomyosin 1 (alpha) -0.0122977
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.01218
RPS23 ribosomal protein S23 -0.0120569
TRIM26 tripartite motif containing 26 -0.0120179
FTL ferritin, light polypeptide -0.0119147
SOS1 son of sevenless homolog 1 (Drosophila) -0.0118217
JMJD1C jumonji domain containing 1C -0.011657
BCLAF1 BCL2-associated transcription factor 1 -0.0115698
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0115648
ACOX3 acyl-CoA oxidase 3, pristanoyl -0.0115599
IER3 immediate early response 3 -0.0115408
GOLGA4 golgin A4 -0.0114943
PAWR PRKC, apoptosis, WT1, regulator -0.0112555
CDH2 cadherin 2, type 1, N-cadherin (neuronal) -0.0112288
TM9SF3 transmembrane 9 superfamily member 3 -0.0111964
PHF14 PHD finger protein 14 -0.0110317
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0110134
TMEM41B transmembrane protein 41B -0.0109885
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0108027
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0107919
BPTF bromodomain PHD finger transcription factor -0.0107676
NCOA7 nuclear receptor coactivator 7 -0.0107442
RRBP1 ribosome binding protein 1 -0.0106805
MBTD1 mbt domain containing 1 -0.0106308
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0104219
SYNJ2 synaptojanin 2 -0.0103251
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0101739
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 -0.0100484
CCND1 cyclin D1 -0.00997738
ZFAND6 zinc finger, AN1-type domain 6 -0.00996146
DLC1 DLC1 Rho GTPase activating protein -0.00989154
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) -0.00983
ZNF486 zinc finger protein 486 -0.00976346
SHTN1 shootin 1 -0.00969441
NCOA1 nuclear receptor coactivator 1 -0.00967337
ICAM1 intercellular adhesion molecule 1 -0.00965867
EIF5B eukaryotic translation initiation factor 5B -0.00965151
LUZP1 leucine zipper protein 1 -0.00964081
EEF2 eukaryotic translation elongation factor 2 -0.00962864
PDIA3 protein disulfide isomerase family A, member 3 -0.00962047
SRPK1 SRSF protein kinase 1 -0.00953699
RTKN rhotekin -0.00941342
EML4 echinoderm microtubule associated protein like 4 -0.00939473