Clopidogrel_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clopidogrel perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clopidogrel_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor 0.231927
TXNRD1 thioredoxin reductase 1 0.0853091
SOD2 superoxide dismutase 2, mitochondrial 0.0738577
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0682807
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0682803
ASPH aspartate beta-hydroxylase 0.0607265
RPS3 ribosomal protein S3 0.0552027
LMO7 LIM domain 7 0.0525755
GCLC glutamate-cysteine ligase, catalytic subunit 0.045184
LDHA lactate dehydrogenase A 0.0417443
LAMC2 laminin, gamma 2 0.0409194
SLTM SAFB-like, transcription modulator 0.0401352
USP34 ubiquitin specific peptidase 34 0.0391518
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0378634
LAMB3 laminin, beta 3 0.0372944
TES testin LIM domain protein 0.0364591
MCL1 myeloid cell leukemia 1 0.0359002
TBC1D22A TBC1 domain family, member 22A 0.0354318
BIRC6 baculoviral IAP repeat containing 6 0.0348161
ANXA2 annexin A2 0.0340146
CAMTA1 calmodulin binding transcription activator 1 0.0333226
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0321324
PGK1 phosphoglycerate kinase 1 0.0316925
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0313374
PKM pyruvate kinase, muscle 0.0308408
PATJ PATJ crumbs cell polarity complex component 0.0307716
SRRM2 serine/arginine repetitive matrix 2 0.0305297
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0305225
ERRFI1 ERBB receptor feedback inhibitor 1 0.0303386
HDLBP high density lipoprotein binding protein 0.0301991
RICTOR RPTOR independent companion of MTOR, complex 2 0.0299915
PTPRM protein tyrosine phosphatase, receptor type, M 0.0297818
TPT1 tumor protein, translationally-controlled 1 0.0293725
ANKRD10 ankyrin repeat domain 10 0.0292162
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0289721
MKI67 marker of proliferation Ki-67 0.0287741
CAV1 caveolin 1, caveolae protein, 22kDa 0.0285789
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0283389
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0282173
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0278719
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0275848
TOP1 topoisomerase (DNA) I 0.0266739
FAM13A family with sequence similarity 13, member A 0.0262252
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0260268
NGLY1 N-glycanase 1 0.0258955
MT2A metallothionein 2A 0.0255417
DSPP dentin sialophosphoprotein 0.0253865
DOCK5 dedicator of cytokinesis 5 0.0253765
ZBTB20 zinc finger and BTB domain containing 20 0.0251225
CPE carboxypeptidase E 0.025096
RPS24 ribosomal protein S24 0.0249451
SEC31A SEC31 homolog A (S. cerevisiae) 0.0248912
PRRC2C proline-rich coiled-coil 2C 0.0246612
EIF4A2 eukaryotic translation initiation factor 4A2 0.0246597
BRWD1 bromodomain and WD repeat domain containing 1 0.0242997
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0240879
SLC38A1 solute carrier family 38, member 1 0.0234161
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0232426
THSD4 thrombospondin, type I, domain containing 4 0.0232
EIF1 eukaryotic translation initiation factor 1 0.0231267
AKAP13 A kinase (PRKA) anchor protein 13 0.0228559
SPAG9 sperm associated antigen 9 0.0223458
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0223357
PCBP2 poly(rC) binding protein 2 0.0222172
SEPTIN2 septin 2 0.0221565
MCTP1 multiple C2 domains, transmembrane 1 0.0218864
DSCAM Down syndrome cell adhesion molecule 0.0217972
RPS8 ribosomal protein S8 0.0216985
TMSB10 thymosin beta 10 0.0216623
CANX calnexin 0.0212431
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0211984
ZC3H11A zinc finger CCCH-type containing 11A 0.0209307
RPL37A ribosomal protein L37a 0.020886
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0206133
CSDE1 cold shock domain containing E1, RNA-binding 0.0205416
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0205134
RSF1 remodeling and spacing factor 1 0.0203238
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0196286
ARHGAP32 Rho GTPase activating protein 32 0.0194608
SAMD4A sterile alpha motif domain containing 4A 0.0194541
CTTN cortactin 0.0193113
ENSA endosulfine alpha 0.0192237
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0190945
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0190079
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0189912
MYOF myoferlin 0.0189894
TMCO3 transmembrane and coiled-coil domains 3 0.0189399
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0186025
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0185428
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0183326
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0183267
MYH9 myosin, heavy chain 9, non-muscle 0.0182902
OGA O-GlcNAcase 0.0182385
TMF1 TATA element modulatory factor 1 0.0181248
ANKHD1 ankyrin repeat and KH domain containing 1 0.0181201
ANKRD17 ankyrin repeat domain 17 0.018087
ARGLU1 arginine and glutamate rich 1 0.0179499
SCEL sciellin 0.0178685
CXCL8 chemokine (C-X-C motif) ligand 8 0.0175321
UBC ubiquitin C 0.0175199

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.25924
FTH1 ferritin, heavy polypeptide 1 -0.0367866
LOC112694756 uncharaterized LOC112694756 -0.0265263
ANKRD37 ankyrin repeat domain 37 -0.0191643
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0174984
EGR1 early growth response 1 -0.0131943
RAP1B RAP1B, member of RAS oncogene family -0.0119273
SEC61G Sec61 gamma subunit -0.0116472
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0102466
PDE8A phosphodiesterase 8A -0.0101953
P4HB prolyl 4-hydroxylase, beta polypeptide -0.00798174
IFI44L interferon-induced protein 44-like -0.00740909
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.00706813
NR1D1 nuclear receptor subfamily 1, group D, member 1 -0.00696255
IFI6 interferon, alpha-inducible protein 6 -0.00651786
GRAMD1B GRAM domain containing 1B -0.00642647
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 -0.00637901
IER3 immediate early response 3 -0.00588854
DTNA dystrobrevin, alpha -0.00563343
HILPDA hypoxia inducible lipid droplet-associated -0.00558844
KYNU kynureninase -0.00541613
HLA-B major histocompatibility complex, class I, B -0.00531989
ASTN2 astrotactin 2 -0.00508807
RPS15 ribosomal protein S15 -0.00506136
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0048666
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.00476004
CLOCK clock circadian regulator -0.00473749
IFI44 interferon-induced protein 44 -0.00470072
NT5E 5'-nucleotidase, ecto (CD73) -0.00467597
ADAM28 ADAM metallopeptidase domain 28 -0.00451291
PLS1 plastin 1 -0.00450743
RPL38 ribosomal protein L38 -0.00450269
PER1 period circadian clock 1 -0.00441105
FN1 fibronectin 1 -0.00429777
H2BC21 H2B clustered histone 21 -0.00429153
RNASEH2A ribonuclease H2, subunit A -0.00428559
MX1 MX dynamin-like GTPase 1 -0.0042848
WSB1 WD repeat and SOCS box containing 1 -0.0042829
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.00426356
CCND1 cyclin D1 -0.00423562
RNF24 ring finger protein 24 -0.00413495
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.00405578
HS6ST3 heparan sulfate 6-O-sulfotransferase 3 -0.00405157
FOXO3 forkhead box O3 -0.0040242
CDKN2A cyclin-dependent kinase inhibitor 2A -0.00399374
BRD2 bromodomain containing 2 -0.00396939
NPTX1 neuronal pentraxin I -0.00394578
ATF4 activating transcription factor 4 -0.00392897
EPS8 epidermal growth factor receptor pathway substrate 8 -0.00390491
IFI16 interferon, gamma-inducible protein 16 -0.00387126
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.00384486
IGF2 insulin-like growth factor 2 -0.00370165
DPYD dihydropyrimidine dehydrogenase -0.00368752
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.00367485
VIM vimentin -0.00356009
C3ORF52 chromosome 3 open reading frame 52 -0.0035412
WAC WW domain containing adaptor with coiled-coil -0.00352839
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.00340293
VAV3 vav 3 guanine nucleotide exchange factor -0.00338474
HSPB1 heat shock 27kDa protein 1 -0.00335798
RAB21 RAB21, member RAS oncogene family -0.00335178
PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase -0.00332343
LOC102724023 ES1 protein homolog, mitochondrial -0.00331842
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.00330707
PALLD palladin, cytoskeletal associated protein -0.00329715
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.00328766
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 -0.00318312
AREG amphiregulin -0.00315222
CABIN1 calcineurin binding protein 1 -0.00314617
BASP1 brain abundant, membrane attached signal protein 1 -0.00314112
RPL21 ribosomal protein L21 -0.00313982
ARL4C ADP-ribosylation factor-like 4C -0.00313706
KXD1 KxDL motif containing 1 -0.0031294
HMGB1 high mobility group box 1 -0.00309074
KCNK1 potassium channel, two pore domain subfamily K, member 1 -0.00306889
AKAP12 A kinase (PRKA) anchor protein 12 -0.00303092
CNOT3 CCR4-NOT transcription complex, subunit 3 -0.00301698
WTAP Wilms tumor 1 associated protein -0.0030013
GRAMD2B GRAM domain containing 2B -0.00296694
COLEC11 collectin sub-family member 11 -0.00294439
UBL4A ubiquitin-like 4A -0.00292804
PNRC1 proline-rich nuclear receptor coactivator 1 -0.00292779
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.00292584
HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 -0.00290363
PML promyelocytic leukemia -0.00288101
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 -0.00287493
MFHAS1 malignant fibrous histiocytoma amplified sequence 1 -0.00287086
XAF1 XIAP associated factor 1 -0.00285761
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.00285754
DGKH diacylglycerol kinase, eta -0.00285096
MFSD6 major facilitator superfamily domain containing 6 -0.00280839
ARRDC4 arrestin domain containing 4 -0.00279199
TRIM28 tripartite motif containing 28 -0.00278581
TMC6 transmembrane channel-like 6 -0.00273992
SMIM30 small integral membrane protein 30 -0.00273551
ADORA2A adenosine A2a receptor -0.00273426
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 -0.00273344
HSPA8 heat shock 70kDa protein 8 -0.00273087
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) -0.00273068
BCR breakpoint cluster region -0.00272912