Clopidogrel_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clopidogrel perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clopidogrel_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.131358
PABPC1 poly(A) binding protein, cytoplasmic 1 0.118108
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.106793
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0828826
TXNRD1 thioredoxin reductase 1 0.0823863
TPM3 tropomyosin 3 0.0817299
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0759066
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0739982
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0655577
RTN4 reticulon 4 0.0632703
RBM25 RNA binding motif protein 25 0.0588731
PARD3 par-3 family cell polarity regulator 0.0579056
CCNL1 cyclin L1 0.0564162
WDR43 WD repeat domain 43 0.056416
PCBP2 poly(rC) binding protein 2 0.0539749
ERBIN erbb2 interacting protein 0.051298
ZFAND3 zinc finger, AN1-type domain 3 0.0499293
KTN1 kinectin 1 (kinesin receptor) 0.0495509
PDIA6 protein disulfide isomerase family A, member 6 0.0491864
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) 0.0487778
VIM vimentin 0.0466217
AKAP12 A kinase (PRKA) anchor protein 12 0.0463328
NUP58 nucleoporin 58 0.0459527
ADAM17 ADAM metallopeptidase domain 17 0.0455332
COPA coatomer protein complex, subunit alpha 0.0453937
RBM39 RNA binding motif protein 39 0.0446836
YBX1 Y box binding protein 1 0.0441854
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0426846
TPD52 tumor protein D52 0.0422376
ZNF292 zinc finger protein 292 0.0421527
ZNF207 zinc finger protein 207 0.041417
RPS12 ribosomal protein S12 0.0412738
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0410049
RNF145 ring finger protein 145 0.0409553
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0406516
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0396664
GLS2 glutaminase 2 (liver, mitochondrial) 0.0396561
VEZT vezatin, adherens junctions transmembrane protein 0.0389827
PM20D1 peptidase M20 domain containing 1 0.0387103
FGB fibrinogen beta chain 0.0383446
WAC WW domain containing adaptor with coiled-coil 0.0381853
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0377227
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0376176
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0370365
USP3 ubiquitin specific peptidase 3 0.0367581
RICTOR RPTOR independent companion of MTOR, complex 2 0.0363728
ENAH enabled homolog (Drosophila) 0.0363721
PUM1 pumilio RNA-binding family member 1 0.0360218
PDIA3 protein disulfide isomerase family A, member 3 0.0356006
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0355842
ADAM9 ADAM metallopeptidase domain 9 0.0355333
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0354489
PAWR PRKC, apoptosis, WT1, regulator 0.0354398
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0353322
PFN1 profilin 1 0.0351943
NCEH1 neutral cholesterol ester hydrolase 1 0.0343939
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0340643
PDLIM5 PDZ and LIM domain 5 0.0340015
PLS3 plastin 3 0.0326174
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0324729
NQO1 NAD(P)H dehydrogenase, quinone 1 0.032097
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0320824
KIF5B kinesin family member 5B 0.032067
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.031222
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0311704
MYOF myoferlin 0.0311378
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0309727
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0307378
YBX3 Y box binding protein 3 0.0305122
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0302538
TMEM87A transmembrane protein 87A 0.0302234
MBNL1 muscleblind-like splicing regulator 1 0.0301342
UBA6 ubiquitin-like modifier activating enzyme 6 0.0299114
ECT2 epithelial cell transforming 2 0.0295078
BCLAF1 BCL2-associated transcription factor 1 0.0293857
PUM2 pumilio RNA-binding family member 2 0.0293809
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 0.0292426
TPX2 TPX2, microtubule-associated 0.0291756
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0291745
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0290775
BIRC6 baculoviral IAP repeat containing 6 0.0289839
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0288112
MATR3 matrin 3 0.0285722
MORF4L1 mortality factor 4 like 1 0.0285698
CHN1 chimerin 1 0.0283689
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0283634
MACF1 microtubule-actin crosslinking factor 1 0.0279356
PNN pinin, desmosome associated protein 0.0279019
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0276699
RANBP9 RAN binding protein 9 0.0276414
CSDE1 cold shock domain containing E1, RNA-binding 0.0273805
NUP153 nucleoporin 153kDa 0.0272857
ANKRD28 ankyrin repeat domain 28 0.0271863
FMNL2 formin-like 2 0.0271231
QKI QKI, KH domain containing, RNA binding 0.0269412
NCKAP1 NCK-associated protein 1 0.0267357
SFPQ splicing factor proline/glutamine-rich 0.0266984
MIS18BP1 MIS18 binding protein 1 0.0266509
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0265115
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0262023

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.1657
ACTG1 actin gamma 1 -0.0923806
IER3 immediate early response 3 -0.0862275
IGF2 insulin-like growth factor 2 -0.0832603
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0808138
TPT1 tumor protein, translationally-controlled 1 -0.0704838
TM4SF1 transmembrane 4 L six family member 1 -0.0643961
THSD4 thrombospondin, type I, domain containing 4 -0.0572946
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0546395
CAVIN1 caveolae associated protein 1 -0.0437748
MT2A metallothionein 2A -0.043366
HLA-B major histocompatibility complex, class I, B -0.0422278
TFPI2 tissue factor pathway inhibitor 2 -0.0392754
RPL35A ribosomal protein L35a -0.039012
EIF1 eukaryotic translation initiation factor 1 -0.0374429
IGFBP3 insulin-like growth factor binding protein 3 -0.0369932
C15ORF48 chromosome 15 open reading frame 48 -0.0361675
PDE4D phosphodiesterase 4D, cAMP-specific -0.0324682
RPL34 ribosomal protein L34 -0.0316682
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0303934
RPS29 ribosomal protein S29 -0.0274715
RPL38 ribosomal protein L38 -0.0272539
S100A10 S100 calcium binding protein A10 -0.0267046
DOCK5 dedicator of cytokinesis 5 -0.0261349
RPS21 ribosomal protein S21 -0.025698
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0252784
HLA-E major histocompatibility complex, class I, E -0.0249537
SAMD4A sterile alpha motif domain containing 4A -0.0248757
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0238992
INTS6 integrator complex subunit 6 -0.0234355
BASP1 brain abundant, membrane attached signal protein 1 -0.0227316
PYGL phosphorylase, glycogen, liver -0.0224156
ZBTB20 zinc finger and BTB domain containing 20 -0.0216935
AHNAK AHNAK nucleoprotein -0.0213027
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0207149
S100A6 S100 calcium binding protein A6 -0.0206609
IGFBP4 insulin-like growth factor binding protein 4 -0.0205663
SVIL supervillin -0.0204651
LMNA lamin A/C -0.020023
KYNU kynureninase -0.0198884
CDK12 cyclin-dependent kinase 12 -0.0198432
RPS15 ribosomal protein S15 -0.0191318
RPL11 ribosomal protein L11 -0.0189802
CUX1 cut-like homeobox 1 -0.0188166
EGFR epidermal growth factor receptor -0.0187774
GLIS3 GLIS family zinc finger 3 -0.018467
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0183615
CD99 CD99 molecule -0.0182282
CMIP c-Maf inducing protein -0.0180589
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0179132
MYO1E myosin IE -0.017253
HLA-A major histocompatibility complex, class I, A -0.0172426
NNMT nicotinamide N-methyltransferase -0.0171576
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0170316
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0170228
HMGA2 high mobility group AT-hook 2 -0.0170027
RPS8 ribosomal protein S8 -0.0169795
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0169264
LOC112694756 uncharaterized LOC112694756 -0.016697
SMOC1 SPARC related modular calcium binding 1 -0.0165316
ATG7 autophagy related 7 -0.016485
PCNX4 pecanex 4 -0.0163963
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 -0.0161968
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0159351
UBB ubiquitin B -0.0158236
WNT2B wingless-type MMTV integration site family, member 2B -0.0158233
ANGPTL4 angiopoietin-like 4 -0.0157137
TNS3 tensin 3 -0.0156137
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0154956
GOLGB1 golgin B1 -0.0153676
AHNAK2 AHNAK nucleoprotein 2 -0.0153287
HLA-C major histocompatibility complex, class I, C -0.0152302
MAML3 mastermind-like 3 (Drosophila) -0.0149811
PTMA prothymosin, alpha -0.0147417
RPL31 ribosomal protein L31 -0.014694
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.014642
ARHGAP26 Rho GTPase activating protein 26 -0.0145617
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0145218
RPS23 ribosomal protein S23 -0.0143964
BICD1 bicaudal D homolog 1 (Drosophila) -0.0142752
TPM1 tropomyosin 1 (alpha) -0.0140455
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.014035
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0139793
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.0139355
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0138258
RPS24 ribosomal protein S24 -0.0137413
RSL1D1 ribosomal L1 domain containing 1 -0.0136413
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0136385
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0135281
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0134366
RPLP1 ribosomal protein, large, P1 -0.013375
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0133383
ANKLE2 ankyrin repeat and LEM domain containing 2 -0.0133337
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0131767
RPS11 ribosomal protein S11 -0.0131726
TAS2R14 taste receptor, type 2, member 14 -0.0131271
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0131003
ASTN2 astrotactin 2 -0.0130043
CDK13 cyclin-dependent kinase 13 -0.0128761
SH3KBP1 SH3-domain kinase binding protein 1 -0.0127712