Clopidogrel_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clopidogrel perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clopidogrel_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.0772932
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0456274
RAD51B RAD51 paralog B 0.0448331
TRIO trio Rho guanine nucleotide exchange factor 0.0419515
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0392557
KTN1 kinectin 1 (kinesin receptor) 0.0375149
TPM3 tropomyosin 3 0.0314134
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.028785
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0272729
PCBP2 poly(rC) binding protein 2 0.0263453
ERRFI1 ERBB receptor feedback inhibitor 1 0.0257106
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0242589
MARCHF4 membrane associated ring-CH-type finger 4 0.0236019
ZCCHC7 zinc finger, CCHC domain containing 7 0.0234874
RPS12 ribosomal protein S12 0.0230703
RTN4 reticulon 4 0.0223752
ZFAND3 zinc finger, AN1-type domain 3 0.0223466
OGA O-GlcNAcase 0.0218964
RPS3 ribosomal protein S3 0.0216844
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0210482
SFPQ splicing factor proline/glutamine-rich 0.0208486
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0207102
GRAMD1B GRAM domain containing 1B 0.0206966
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0198947
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0196911
XPO1 exportin 1 0.0192887
MCL1 myeloid cell leukemia 1 0.0189539
NAP1L1 nucleosome assembly protein 1-like 1 0.0187651
CSNK1A1 casein kinase 1, alpha 1 0.0187431
WSB1 WD repeat and SOCS box containing 1 0.018582
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0185788
COPA coatomer protein complex, subunit alpha 0.0185014
VIM vimentin 0.0184498
RPL37 ribosomal protein L37 0.0182345
STAT1 signal transducer and activator of transcription 1, 91kDa 0.01761
ZNF638 zinc finger protein 638 0.0172167
RUSC2 RUN and SH3 domain containing 2 0.0171422
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0166178
ATP11A ATPase, class VI, type 11A 0.0165773
ANO6 anoctamin 6 0.0165349
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0164978
FBXO11 F-box protein 11 0.0164428
RBM25 RNA binding motif protein 25 0.0164329
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0163623
BIRC6 baculoviral IAP repeat containing 6 0.0162727
ZNF292 zinc finger protein 292 0.0161554
GPHN gephyrin 0.0160451
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.015963
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0159235
RPS8 ribosomal protein S8 0.0158745
TMEM41B transmembrane protein 41B 0.0156455
PHIP pleckstrin homology domain interacting protein 0.0155234
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0154615
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0152433
RPS18 ribosomal protein S18 0.0152361
ANKRD36 ankyrin repeat domain 36 0.0151142
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0150874
CCNL1 cyclin L1 0.0150319
YBX1 Y box binding protein 1 0.0149977
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0149852
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0148947
ADAM17 ADAM metallopeptidase domain 17 0.0147847
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 0.0144621
PGK1 phosphoglycerate kinase 1 0.0144047
JMJD1C jumonji domain containing 1C 0.0143722
BBX bobby sox homolog (Drosophila) 0.0140842
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0139784
MYH9 myosin, heavy chain 9, non-muscle 0.0136656
PNN pinin, desmosome associated protein 0.0136143
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0135889
RNF145 ring finger protein 145 0.013557
VMP1 vacuole membrane protein 1 0.0135109
PPME1 protein phosphatase methylesterase 1 0.0134886
GATAD2B GATA zinc finger domain containing 2B 0.0134485
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0134047
USP34 ubiquitin specific peptidase 34 0.0133839
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0133546
SET SET nuclear proto-oncogene 0.0132792
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0130991
CTTNBP2NL CTTNBP2 N-terminal like 0.013014
PTK2 protein tyrosine kinase 2 0.0130127
COG5 component of oligomeric golgi complex 5 0.0129435
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0128153
MACF1 microtubule-actin crosslinking factor 1 0.0127942
SMC4 structural maintenance of chromosomes 4 0.0126247
TAS2R14 taste receptor, type 2, member 14 0.0126242
CSDE1 cold shock domain containing E1, RNA-binding 0.0125603
NFE2L2 nuclear factor, erythroid 2-like 2 0.0125287
ATXN2 ataxin 2 0.0125174
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0125031
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.0124833
RPL37A ribosomal protein L37a 0.0124315
TNPO3 transportin 3 0.0124091
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0124047
R3HDM2 R3H domain containing 2 0.012397
SMYD3 SET and MYND domain containing 3 0.0123203
EXOC4 exocyst complex component 4 0.0123152
PLCB4 phospholipase C, beta 4 0.0121128
ADAM9 ADAM metallopeptidase domain 9 0.0120993
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0120916

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.226316
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0381497
ACTG1 actin gamma 1 -0.035302
TMSB10 thymosin beta 10 -0.0325628
PTMA prothymosin, alpha -0.0324323
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0270826
HLA-B major histocompatibility complex, class I, B -0.0238514
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0234268
RPS15 ribosomal protein S15 -0.020817
RPS21 ribosomal protein S21 -0.0189663
POTEF POTE ankyrin domain family, member F -0.01808
IFI6 interferon, alpha-inducible protein 6 -0.0179712
IGF2 insulin-like growth factor 2 -0.0176662
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0153184
DEK DEK proto-oncogene -0.014812
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0147172
RPL8 ribosomal protein L8 -0.0146886
TPT1 tumor protein, translationally-controlled 1 -0.0145078
NCOA7 nuclear receptor coactivator 7 -0.0143923
RPL34 ribosomal protein L34 -0.0139749
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0134168
CCND1 cyclin D1 -0.0131599
RPL35A ribosomal protein L35a -0.0128778
EGR1 early growth response 1 -0.0127481
RPL38 ribosomal protein L38 -0.0126062
RSL1D1 ribosomal L1 domain containing 1 -0.0124063
EEF2 eukaryotic translation elongation factor 2 -0.0123588
TUBB tubulin, beta class I -0.0123197
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.011978
FUS FUS RNA binding protein -0.0114899
OSMR oncostatin M receptor -0.0112994
GNAS GNAS complex locus -0.0112372
H1-0 H1.0 linker histone -0.0112214
TM4SF1 transmembrane 4 L six family member 1 -0.0110167
RYR3 ryanodine receptor 3 -0.0107213
IER3 immediate early response 3 -0.0104912
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0103844
TPM2 tropomyosin 2 (beta) -0.0102688
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0100915
S100A10 S100 calcium binding protein A10 -0.00992952
BASP1 brain abundant, membrane attached signal protein 1 -0.0098251
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.00982264
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.00938563
GOLGB1 golgin B1 -0.00930986
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.00928931
KHSRP KH-type splicing regulatory protein -0.00913792
HMGA2 high mobility group AT-hook 2 -0.00877463
CANX calnexin -0.00857104
CAVIN1 caveolae associated protein 1 -0.00854322
PDE10A phosphodiesterase 10A -0.00827063
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.00816357
TCEAL4 transcription elongation factor A (SII)-like 4 -0.00815706
MARCKS myristoylated alanine-rich protein kinase C substrate -0.00794714
VCL vinculin -0.00783711
FTH1 ferritin, heavy polypeptide 1 -0.00780983
TPM4 tropomyosin 4 -0.00777875
SRP72 signal recognition particle 72kDa -0.0076694
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0076536
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.00762813
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.00755968
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.00754095
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.00744504
JUN jun proto-oncogene -0.00741304
DHFR dihydrofolate reductase -0.007358
STAU1 staufen double-stranded RNA binding protein 1 -0.00727467
EIF4A1 eukaryotic translation initiation factor 4A1 -0.00725226
ASTN2 astrotactin 2 -0.00715084
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.00713435
NLGN1 neuroligin 1 -0.00708777
IFIH1 interferon induced with helicase C domain 1 -0.0069937
IQGAP1 IQ motif containing GTPase activating protein 1 -0.00687259
EPAS1 endothelial PAS domain protein 1 -0.00682033
STC1 stanniocalcin 1 -0.00668463
LMAN1 lectin, mannose-binding, 1 -0.00663278
UBB ubiquitin B -0.00662238
RPS10 ribosomal protein S10 -0.00658142
COL5A2 collagen, type V, alpha 2 -0.00655946
C15ORF48 chromosome 15 open reading frame 48 -0.00652511
HLA-C major histocompatibility complex, class I, C -0.00650768
AHNAK AHNAK nucleoprotein -0.00648407
NOLC1 nucleolar and coiled-body phosphoprotein 1 -0.00646839
RPL11 ribosomal protein L11 -0.00642307
TFPI2 tissue factor pathway inhibitor 2 -0.00640199
CD2AP CD2-associated protein -0.00627368
ZNF217 zinc finger protein 217 -0.00624505
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.00615361
RIMS2 regulating synaptic membrane exocytosis 2 -0.00607616
PDIA3 protein disulfide isomerase family A, member 3 -0.0060759
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.00604832
BMP5 bone morphogenetic protein 5 -0.00590446
RPL32 ribosomal protein L32 -0.00588583
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0058151
FSCN1 fascin actin-bundling protein 1 -0.00578358
ATN1 atrophin 1 -0.0057497
PRH1 proline-rich protein HaeIII subfamily 1 -0.00566159
AKAP12 A kinase (PRKA) anchor protein 12 -0.00564921
ATP5F1B ATP synthase F1 subunit beta -0.00564701
BNC2 basonuclin 2 -0.00563931
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.005554
CUX1 cut-like homeobox 1 -0.005536