Clopidogrel_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clopidogrel perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clopidogrel_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0951116
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0911096
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0832263
VIM vimentin 0.0831466
TSC22D2 TSC22 domain family, member 2 0.0651269
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0627959
RPS12 ribosomal protein S12 0.0627297
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0621909
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0586727
SPAG9 sperm associated antigen 9 0.0566819
PTMA prothymosin, alpha 0.0549655
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.046525
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.0444968
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0443618
SMC4 structural maintenance of chromosomes 4 0.042732
MKI67 marker of proliferation Ki-67 0.0425835
RPLP0 ribosomal protein, large, P0 0.0419133
FBXO11 F-box protein 11 0.0409457
SETD5 SET domain containing 5 0.0407951
SRP54 signal recognition particle 54kDa 0.0406508
RPL31 ribosomal protein L31 0.0387879
CLASP2 cytoplasmic linker associated protein 2 0.0385661
YAP1 Yes-associated protein 1 0.0384358
DST dystonin 0.0380576
CENPE centromere protein E, 312kDa 0.0378068
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0377082
KMT2E lysine (K)-specific methyltransferase 2E 0.0364352
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.0354186
RTN4 reticulon 4 0.0351436
PCBP2 poly(rC) binding protein 2 0.0348101
NAMPT nicotinamide phosphoribosyltransferase 0.0346749
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0345957
SOX5 SRY (sex determining region Y)-box 5 0.0343966
YBX1 Y box binding protein 1 0.0338865
LCORL ligand dependent nuclear receptor corepressor-like 0.0335302
PFN1 profilin 1 0.0328072
RPS6 ribosomal protein S6 0.0324488
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0323482
RPL23 ribosomal protein L23 0.0322204
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.032157
MACF1 microtubule-actin crosslinking factor 1 0.0321059
TPX2 TPX2, microtubule-associated 0.0317976
ADAM9 ADAM metallopeptidase domain 9 0.0310723
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0309659
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0308457
CKAP2 cytoskeleton associated protein 2 0.0308214
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.030769
TRPS1 trichorhinophalangeal syndrome I 0.0307591
CCNA2 cyclin A2 0.0305834
KMT2C lysine (K)-specific methyltransferase 2C 0.0304601
ANKRD28 ankyrin repeat domain 28 0.0304488
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.030193
MORF4L2 mortality factor 4 like 2 0.0299258
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0297767
PDGFC platelet derived growth factor C 0.0297586
H1-0 H1.0 linker histone 0.0297181
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0296285
COPA coatomer protein complex, subunit alpha 0.0295821
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0295281
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0293049
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0288952
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0287748
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0287365
ANK2 ankyrin 2, neuronal 0.0287123
SGO2 shugoshin 2 0.028595
NUSAP1 nucleolar and spindle associated protein 1 0.0280249
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.02793
TNPO1 transportin 1 0.0275692
RAI1 retinoic acid induced 1 0.0274843
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0271799
ZCCHC7 zinc finger, CCHC domain containing 7 0.0271113
UBA2 ubiquitin-like modifier activating enzyme 2 0.0270803
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0270684
CKAP5 cytoskeleton associated protein 5 0.0270469
RPL19 ribosomal protein L19 0.0270189
FIGN fidgetin 0.0269962
ATF7IP activating transcription factor 7 interacting protein 0.0269016
RNF145 ring finger protein 145 0.0267995
RPL12 ribosomal protein L12 0.026685
TCEA1 transcription elongation factor A (SII), 1 0.0266766
THOC2 THO complex 2 0.026658
ARHGAP15 Rho GTPase activating protein 15 0.0266575
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0266234
BHLHE40 basic helix-loop-helix family, member e40 0.0266127
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0262544
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0262522
ZMYM2 zinc finger, MYM-type 2 0.0262237
RSF1 remodeling and spacing factor 1 0.026202
RPL26 ribosomal protein L26 0.026017
RPL28 ribosomal protein L28 0.0258748
B2M beta-2-microglobulin 0.0257414
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0257348
ADGRL2 adhesion G protein-coupled receptor L2 0.0257266
PDE4D phosphodiesterase 4D, cAMP-specific 0.0256008
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0255632
RAD23B RAD23 homolog B (S. cerevisiae) 0.0255171
NOP58 NOP58 ribonucleoprotein 0.0254936
GPBP1 GC-rich promoter binding protein 1 0.0252787
TMSB4X thymosin beta 4, X-linked 0.0252757
COG5 component of oligomeric golgi complex 5 0.0252146

decreased expression

Symbol Name Standardized Value
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.11062
CADM2 cell adhesion molecule 2 -0.0786662
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.076484
COL11A1 collagen, type XI, alpha 1 -0.0722601
HMCN1 hemicentin 1 -0.0573416
PCLO piccolo presynaptic cytomatrix protein -0.0557362
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0531173
COL1A2 collagen, type I, alpha 2 -0.0506241
SLIT2 slit homolog 2 (Drosophila) -0.0496536
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0456324
PLPP1 phospholipid phosphatase 1 -0.0399064
COL3A1 collagen, type III, alpha 1 -0.0382762
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0378901
GPC3 glypican 3 -0.0378663
NCOR1 nuclear receptor corepressor 1 -0.0375821
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0371681
PEG10 paternally expressed 10 -0.034419
ACTG1 actin gamma 1 -0.0331901
ENAH enabled homolog (Drosophila) -0.0327289
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0320574
CSMD3 CUB and Sushi multiple domains 3 -0.0312652
ACTN4 actinin, alpha 4 -0.0311835
LOC112694756 uncharaterized LOC112694756 -0.0308973
TENM3 teneurin transmembrane protein 3 -0.0306154
UPP1 uridine phosphorylase 1 -0.0301919
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0301274
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0293739
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0280165
CABLES1 Cdk5 and Abl enzyme substrate 1 -0.0278678
SORBS2 sorbin and SH3 domain containing 2 -0.0278256
ANXA1 annexin A1 -0.0275239
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0273754
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0269415
COL5A2 collagen, type V, alpha 2 -0.0266175
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.026148
CDH10 cadherin 10, type 2 (T2-cadherin) -0.025559
ZEB2 zinc finger E-box binding homeobox 2 -0.0254851
EEF2 eukaryotic translation elongation factor 2 -0.0254409
ANKRD12 ankyrin repeat domain 12 -0.0253586
AUTS2 autism susceptibility candidate 2 -0.0252703
DNAH14 dynein, axonemal, heavy chain 14 -0.0252625
ENO1 enolase 1, (alpha) -0.0250973
NTM neurotrimin -0.0249758
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0249472
PARD3B par-3 family cell polarity regulator beta -0.0247685
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0244985
EPHA3 EPH receptor A3 -0.0244433
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0242444
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0242166
SYT1 synaptotagmin I -0.0239914
CAVIN1 caveolae associated protein 1 -0.0236762
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0235889
MYO10 myosin X -0.0233065
MAP4 microtubule-associated protein 4 -0.0229836
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0226872
TMEM64 transmembrane protein 64 -0.0226559
FUS FUS RNA binding protein -0.0226039
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 -0.0225357
ZNF292 zinc finger protein 292 -0.0223452
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0222732
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0222171
TAS2R14 taste receptor, type 2, member 14 -0.0220925
LIN28B lin-28 homolog B (C. elegans) -0.0215863
FLNA filamin A, alpha -0.0213254
VGLL3 vestigial-like family member 3 -0.0212571
THBS1 thrombospondin 1 -0.0210984
NIBAN1 niban apoptosis regulator 1 -0.0205664
BRMS1L breast cancer metastasis-suppressor 1-like -0.020562
IVNS1ABP influenza virus NS1A binding protein -0.0201867
HNRNPL heterogeneous nuclear ribonucleoprotein L -0.0200997
TFRC transferrin receptor -0.0200386
WASF2 WAS protein family, member 2 -0.0197295
USP25 ubiquitin specific peptidase 25 -0.0195208
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -0.0193193
ICE1 interactor of little elongation complex ELL subunit 1 -0.0193084
FER fer (fps/fes related) tyrosine kinase -0.0190853
CDK6 cyclin-dependent kinase 6 -0.0190724
MTCL1 microtubule crosslinking factor 1 -0.0188288
FAM171B family with sequence similarity 171, member B -0.0186026
SKI SKI proto-oncogene -0.018571
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like -0.0184513
MDN1 MDN1, midasin homolog (yeast) -0.0183559
PCDH11Y protocadherin 11 Y-linked -0.0183035
ARID1A AT rich interactive domain 1A (SWI-like) -0.0182657
BMPR1A bone morphogenetic protein receptor, type IA -0.0182619
NEBL nebulette -0.0181333
SLC38A2 solute carrier family 38, member 2 -0.018085
BAZ2B bromodomain adjacent to zinc finger domain, 2B -0.0180818
GANAB glucosidase, alpha; neutral AB -0.0180727
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 -0.0178611
PUM1 pumilio RNA-binding family member 1 -0.0177739
BAZ1B bromodomain adjacent to zinc finger domain, 1B -0.0176548
ZMYM4 zinc finger, MYM-type 4 -0.0174719
CLIP2 CAP-GLY domain containing linker protein 2 -0.017461
USH2A Usher syndrome 2A (autosomal recessive, mild) -0.0173428
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0172774
YAF2 YY1 associated factor 2 -0.0172252
BICD1 bicaudal D homolog 1 (Drosophila) -0.0169288
MED13L mediator complex subunit 13-like -0.0168427
DOCK5 dedicator of cytokinesis 5 -0.0167389