Clotrimazole_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clotrimazole perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clotrimazole_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.105853
NTM neurotrimin 0.0933183
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0868425
DST dystonin 0.0852116
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0825612
TSC22D2 TSC22 domain family, member 2 0.0790155
PDE4D phosphodiesterase 4D, cAMP-specific 0.0708393
RPS12 ribosomal protein S12 0.0619504
TRIO trio Rho guanine nucleotide exchange factor 0.0591314
USP25 ubiquitin specific peptidase 25 0.0519259
PARD3B par-3 family cell polarity regulator beta 0.0504189
GLS2 glutaminase 2 (liver, mitochondrial) 0.049661
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0485944
JMJD1C jumonji domain containing 1C 0.0479553
TRPS1 trichorhinophalangeal syndrome I 0.0472585
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0467474
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0467064
TJP1 tight junction protein 1 0.0443347
FOXP2 forkhead box P2 0.0438172
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0436736
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0433062
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0430809
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0427478
RB1CC1 RB1-inducible coiled-coil 1 0.0417282
ANK2 ankyrin 2, neuronal 0.0411874
MEF2A myocyte enhancer factor 2A 0.0406847
NFIA nuclear factor I/A 0.0399548
KMT2E lysine (K)-specific methyltransferase 2E 0.038382
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 0.037078
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0368533
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0359923
ZSWIM6 zinc finger, SWIM-type containing 6 0.0355987
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0355817
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.034648
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0343973
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0335672
EFNA5 ephrin-A5 0.0331715
GOLGA4 golgin A4 0.0330417
CELF2 CUGBP, Elav-like family member 2 0.0325739
ZNF608 zinc finger protein 608 0.03224
EXT1 exostosin glycosyltransferase 1 0.0321838
EEF2 eukaryotic translation elongation factor 2 0.0320421
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0317761
ADGRL3 adhesion G protein-coupled receptor L3 0.0314585
SOS1 son of sevenless homolog 1 (Drosophila) 0.0306834
AKAP9 A kinase (PRKA) anchor protein 9 0.0306206
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0300828
COL5A2 collagen, type V, alpha 2 0.0296615
SFPQ splicing factor proline/glutamine-rich 0.0293085
OSBPL10 oxysterol binding protein-like 10 0.029029
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0289048
FIGN fidgetin 0.0285888
PUM2 pumilio RNA-binding family member 2 0.0284867
RBM25 RNA binding motif protein 25 0.0280946
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 0.0279426
NFIB nuclear factor I/B 0.0279028
YAP1 Yes-associated protein 1 0.0278706
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0278057
UTRN utrophin 0.027548
RTTN rotatin 0.0273983
CDH19 cadherin 19, type 2 0.0273972
BRD2 bromodomain containing 2 0.0272495
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0272191
DSCAM Down syndrome cell adhesion molecule 0.0268407
PCDH18 protocadherin 18 0.026795
SAMD4A sterile alpha motif domain containing 4A 0.0266971
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0266966
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0266957
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0265025
KMT2C lysine (K)-specific methyltransferase 2C 0.0264797
MT2A metallothionein 2A 0.0262374
RREB1 ras responsive element binding protein 1 0.0259958
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.025969
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0258033
ASPH aspartate beta-hydroxylase 0.0254834
RYBP RING1 and YY1 binding protein 0.0253627
SRPK2 SRSF protein kinase 2 0.0253452
ZFYVE16 zinc finger, FYVE domain containing 16 0.0252525
BNC2 basonuclin 2 0.0249534
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0246214
MBIP MAP3K12 binding inhibitory protein 1 0.0246145
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0245498
SET SET nuclear proto-oncogene 0.024521
WAC WW domain containing adaptor with coiled-coil 0.024455
TPM3 tropomyosin 3 0.0241648
EEF1G eukaryotic translation elongation factor 1 gamma 0.0241616
RPL36 ribosomal protein L36 0.024026
NCKAP1 NCK-associated protein 1 0.0237304
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0236402
TTC3 tetratricopeptide repeat domain 3 0.0235446
RPS2 ribosomal protein S2 0.0234734
OSBPL8 oxysterol binding protein-like 8 0.0234653
ARB2A ARB2 cotranscriptional regulator A 0.0233302
ZNF638 zinc finger protein 638 0.023297
MARCHF7 membrane associated ring-CH-type finger 7 0.0232412
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0232291
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.022912
ZZZ3 zinc finger, ZZ-type containing 3 0.0228731
NUMB numb homolog (Drosophila) 0.0228136
EIF4A2 eukaryotic translation initiation factor 4A2 0.0226853

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.193889
GPC3 glypican 3 -0.150047
COL3A1 collagen, type III, alpha 1 -0.141336
VIM vimentin -0.13887
COL1A2 collagen, type I, alpha 2 -0.123366
COL11A1 collagen, type XI, alpha 1 -0.113638
PTMA prothymosin, alpha -0.109791
GNAS GNAS complex locus -0.0874125
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0710853
PGK1 phosphoglycerate kinase 1 -0.0699915
PEG10 paternally expressed 10 -0.0685572
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0629273
RPS16 ribosomal protein S16 -0.0625186
KDM3A lysine (K)-specific demethylase 3A -0.0558607
H1-0 H1.0 linker histone -0.0529299
RPL35A ribosomal protein L35a -0.0525291
RAD21 RAD21 homolog (S. pombe) -0.0520914
ACTG1 actin gamma 1 -0.0504989
MRPS30 mitochondrial ribosomal protein S30 -0.049707
PCDH9 protocadherin 9 -0.0489575
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0487273
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0458137
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0458113
SNX6 sorting nexin 6 -0.0457066
CAVIN1 caveolae associated protein 1 -0.0456091
TENM3 teneurin transmembrane protein 3 -0.0425
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0422221
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0414786
CALU calumenin -0.0407004
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0403519
MDK midkine (neurite growth-promoting factor 2) -0.0401532
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0397706
RPLP0 ribosomal protein, large, P0 -0.0391131
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0390979
ISG15 ISG15 ubiquitin-like modifier -0.0388951
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0385705
SPTSSA serine palmitoyltransferase, small subunit A -0.0385085
MYL12B myosin, light chain 12B, regulatory -0.0379682
SOX2 SRY (sex determining region Y)-box 2 -0.0372748
EMP1 epithelial membrane protein 1 -0.0371443
CADM2 cell adhesion molecule 2 -0.0358866
ZNF385D zinc finger protein 385D -0.0352169
SAMD11 sterile alpha motif domain containing 11 -0.0348511
RAI1 retinoic acid induced 1 -0.0345695
GSE1 Gse1 coiled-coil protein -0.0341925
SFTPA2 surfactant protein A2 -0.0341377
ADNP activity-dependent neuroprotector homeobox -0.0334174
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0333014
MED12L mediator complex subunit 12-like -0.0332515
RPS8 ribosomal protein S8 -0.0330858
LOC112694756 uncharaterized LOC112694756 -0.0327077
ITGAV integrin, alpha V -0.0327025
STRN3 striatin, calmodulin binding protein 3 -0.0325158
UPP1 uridine phosphorylase 1 -0.0325031
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -0.0321719
HSPB1 heat shock 27kDa protein 1 -0.0315527
CAMTA1 calmodulin binding transcription activator 1 -0.0315348
HMCN1 hemicentin 1 -0.0312932
PCDH7 protocadherin 7 -0.0308833
KLHL5 kelch-like family member 5 -0.0305997
TPT1 tumor protein, translationally-controlled 1 -0.0305448
ADGRL2 adhesion G protein-coupled receptor L2 -0.0304775
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0291916
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0291798
KIF4A kinesin family member 4A -0.0283302
FST follistatin -0.0281727
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0280777
PRPF6 pre-mRNA processing factor 6 -0.0279312
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) -0.0277533
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 -0.0270006
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0267879
MKI67 marker of proliferation Ki-67 -0.0265971
RPN2 ribophorin II -0.0265931
ENO1 enolase 1, (alpha) -0.0264132
S100A10 S100 calcium binding protein A10 -0.0264069
SQSTM1 sequestosome 1 -0.0258414
MAP4 microtubule-associated protein 4 -0.0255177
FKBP10 FK506 binding protein 10, 65 kDa -0.0255142
CENPF centromere protein F, 350/400kDa -0.0254771
AHNAK AHNAK nucleoprotein -0.0253103
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0252996
GABARAP GABA(A) receptor-associated protein -0.0251982
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0250223
RAB1A RAB1A, member RAS oncogene family -0.0250194
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0249326
BRMS1L breast cancer metastasis-suppressor 1-like -0.0246815
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0246106
RSL1D1 ribosomal L1 domain containing 1 -0.0245908
SMYD3 SET and MYND domain containing 3 -0.0242716
CNRIP1 cannabinoid receptor interacting protein 1 -0.0242658
SPAG9 sperm associated antigen 9 -0.0242453
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0240931
RAB2A RAB2A, member RAS oncogene family -0.0239482
TCEA1 transcription elongation factor A (SII), 1 -0.0239104
EIF1 eukaryotic translation initiation factor 1 -0.0238882
APOE apolipoprotein E -0.0236772
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0236715
SLC30A8 solute carrier family 30 (zinc transporter), member 8 -0.0235565
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0235492
ARF1 ADP-ribosylation factor 1 -0.0234808