Clotrimazole_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Clotrimazole perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Clotrimazole_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.114268
VIM vimentin 0.095175
CDH13 cadherin 13 0.0915864
AKAP9 A kinase (PRKA) anchor protein 9 0.0839241
EGFR epidermal growth factor receptor 0.0827958
NRXN3 neurexin 3 0.0819436
ASPH aspartate beta-hydroxylase 0.0782297
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0781854
EXT1 exostosin glycosyltransferase 1 0.0770777
ERRFI1 ERBB receptor feedback inhibitor 1 0.070909
TMEM158 transmembrane protein 158 (gene/pseudogene) 0.065291
COL6A2 collagen, type VI, alpha 2 0.0600559
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0598794
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0562818
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0562418
AKAP12 A kinase (PRKA) anchor protein 12 0.0546461
SAMD4A sterile alpha motif domain containing 4A 0.051942
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0518134
STC1 stanniocalcin 1 0.0515324
HMGA2 high mobility group AT-hook 2 0.0512236
TMSB10 thymosin beta 10 0.0507965
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0493924
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0489046
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0474077
SDC4 syndecan 4 0.0458717
GLIS3 GLIS family zinc finger 3 0.0455146
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.044135
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.043715
BACE2 beta-site APP-cleaving enzyme 2 0.0430427
RAI14 retinoic acid induced 14 0.0414383
FNDC3A fibronectin type III domain containing 3A 0.0414194
INTS6 integrator complex subunit 6 0.0409175
VMP1 vacuole membrane protein 1 0.0406429
RND3 Rho family GTPase 3 0.039486
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0394267
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0390724
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0386452
EHBP1 EH domain binding protein 1 0.0384245
ANXA2 annexin A2 0.0383569
ZEB2 zinc finger E-box binding homeobox 2 0.0382796
USP34 ubiquitin specific peptidase 34 0.0374369
GOLGB1 golgin B1 0.0370059
FAM13A family with sequence similarity 13, member A 0.036926
EXOC4 exocyst complex component 4 0.0363024
RPS19 ribosomal protein S19 0.0359964
ERBIN erbb2 interacting protein 0.0357948
ZCCHC7 zinc finger, CCHC domain containing 7 0.0357295
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0356692
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0356163
RAB2A RAB2A, member RAS oncogene family 0.0355419
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.034937
ALK anaplastic lymphoma receptor tyrosine kinase 0.0344728
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0344036
COL6A3 collagen, type VI, alpha 3 0.0342358
MYO10 myosin X 0.0341666
ARHGAP24 Rho GTPase activating protein 24 0.0339743
FRMD4A FERM domain containing 4A 0.0331537
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0331032
RICTOR RPTOR independent companion of MTOR, complex 2 0.0330473
WSB1 WD repeat and SOCS box containing 1 0.0325627
PTPRM protein tyrosine phosphatase, receptor type, M 0.0323102
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0317019
OSMR oncostatin M receptor 0.0316958
UBE3C ubiquitin protein ligase E3C 0.0312999
CUL3 cullin 3 0.0312091
ZNF207 zinc finger protein 207 0.0310718
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.030892
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0307249
DSCAM Down syndrome cell adhesion molecule 0.0307128
SON SON DNA binding protein 0.0303649
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0302079
SQSTM1 sequestosome 1 0.0294334
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0292455
COL7A1 collagen, type VII, alpha 1 0.0291717
TSC22D1 TSC22 domain family, member 1 0.0288507
ANTXR2 anthrax toxin receptor 2 0.028833
CLIP2 CAP-GLY domain containing linker protein 2 0.0287395
FBXW11 F-box and WD repeat domain containing 11 0.0284345
ATXN1 ataxin 1 0.0283898
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0282789
PCM1 pericentriolar material 1 0.0282666
SPAG9 sperm associated antigen 9 0.0281547
ZSWIM6 zinc finger, SWIM-type containing 6 0.0280333
VEGFC vascular endothelial growth factor C 0.0278524
FAF1 Fas (TNFRSF6) associated factor 1 0.0278081
MYO9A myosin IXA 0.0277861
ABLIM3 actin binding LIM protein family, member 3 0.0276518
IGF2 insulin-like growth factor 2 0.0276421
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0275899
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.0274805
MACF1 microtubule-actin crosslinking factor 1 0.0273278
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) 0.0273067
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 0.0272858
VCL vinculin 0.0271915
KTN1 kinectin 1 (kinesin receptor) 0.0271629
RPS17 ribosomal protein S17 0.0271361
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0270654
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0267631
PTK2 protein tyrosine kinase 2 0.0267042
TRIO trio Rho guanine nucleotide exchange factor 0.0266281

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.140293
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0971188
FN1 fibronectin 1 -0.0933023
COL1A1 collagen, type I, alpha 1 -0.0897325
MT2A metallothionein 2A -0.0808266
MAP1B microtubule-associated protein 1B -0.0644514
COL6A1 collagen, type VI, alpha 1 -0.0634222
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0611066
POTEF POTE ankyrin domain family, member F -0.0553658
COL1A2 collagen, type I, alpha 2 -0.0526937
PTMA prothymosin, alpha -0.0514551
KMT2E lysine (K)-specific methyltransferase 2E -0.0512021
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0511631
ACTG1 actin gamma 1 -0.0503637
IGFBP3 insulin-like growth factor binding protein 3 -0.0489448
PKM pyruvate kinase, muscle -0.0475406
MYH9 myosin, heavy chain 9, non-muscle -0.0439584
MIER1 mesoderm induction early response 1, transcriptional regulator -0.0438252
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.043505
PDIA3 protein disulfide isomerase family A, member 3 -0.0424726
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0421158
PTN pleiotrophin -0.0416273
H3-3B H3.3 histone B -0.0410245
IGFBP7 insulin-like growth factor binding protein 7 -0.0405695
EGR1 early growth response 1 -0.0404568
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0399458
CALR calreticulin -0.0398202
LDHA lactate dehydrogenase A -0.0382174
MKI67 marker of proliferation Ki-67 -0.0377767
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0376507
HMGB1 high mobility group box 1 -0.0352588
ZNF395 zinc finger protein 395 -0.0349378
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0346852
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0344436
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0337223
GOLPH3 golgi phosphoprotein 3 (coat-protein) -0.0334871
IARS1 isoleucyl-tRNA synthetase 1 -0.0328958
P4HB prolyl 4-hydroxylase, beta polypeptide -0.03274
BSG basigin (Ok blood group) -0.0325556
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.031899
NFIX nuclear factor I/X (CCAAT-binding transcription factor) -0.0313542
NT5C2 5'-nucleotidase, cytosolic II -0.0308367
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0301862
ITCH itchy E3 ubiquitin protein ligase -0.0300728
NDFIP1 Nedd4 family interacting protein 1 -0.030055
FAM13B family with sequence similarity 13, member B -0.0297808
F3 coagulation factor III (thromboplastin, tissue factor) -0.0295085
CCNI cyclin I -0.0294362
SSBP2 single-stranded DNA binding protein 2 -0.0291458
SF3B3 splicing factor 3b, subunit 3, 130kDa -0.0290608
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0289644
WDPCP WD repeat containing planar cell polarity effector -0.0289548
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0286486
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0280619
SKIC3 SKI3 subunit of superkiller complex -0.0279988
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.027907
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.027736
MAML2 mastermind-like 2 (Drosophila) -0.0276159
FNBP1 formin binding protein 1 -0.0272808
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0270546
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0268575
PHF21A PHD finger protein 21A -0.026838
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0267245
PIAS1 protein inhibitor of activated STAT, 1 -0.0267203
VGLL4 vestigial-like family member 4 -0.0263898
CXCL3 chemokine (C-X-C motif) ligand 3 -0.0263004
TFG TRK-fused gene -0.0262923
CALU calumenin -0.026266
SEPTIN7 septin 7 -0.0259177
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0257108
HMGB2 high mobility group box 2 -0.0251778
APOLD1 apolipoprotein L domain containing 1 -0.0249195
RPL9 ribosomal protein L9 -0.0248442
CKAP2 cytoskeleton associated protein 2 -0.0244863
SREBF2 sterol regulatory element binding transcription factor 2 -0.0243725
TANK TRAF family member-associated NFKB activator -0.0243
USP33 ubiquitin specific peptidase 33 -0.0242678
RNASEH2A ribonuclease H2, subunit A -0.0242287
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast) -0.0241225
XPO1 exportin 1 -0.0240014
RPL28 ribosomal protein L28 -0.0239381
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0238149
PPME1 protein phosphatase methylesterase 1 -0.0237584
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0236884
NRBP1 nuclear receptor binding protein 1 -0.0236161
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0235543
NACA nascent polypeptide-associated complex alpha subunit -0.0235154
NCOA7 nuclear receptor coactivator 7 -0.0230687
PTMS parathymosin -0.0230225
ANLN anillin, actin binding protein -0.0228829
SCLT1 sodium channel and clathrin linker 1 -0.0228285
KIF5B kinesin family member 5B -0.0227352
MARCHF6 membrane associated ring-CH-type finger 6 -0.0227019
TPX2 TPX2, microtubule-associated -0.0225492
GGNBP2 gametogenetin binding protein 2 -0.022421
TMEM123 transmembrane protein 123 -0.0222845
WDR45B WD repeat domain 45B -0.0222656
LCORL ligand dependent nuclear receptor corepressor-like -0.0222411
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0220942
PCOLCE procollagen C-endopeptidase enhancer -0.0220381