Crizotinib (hydrochloride)_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Crizotinib (hydrochloride) perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Crizotinib (hydrochloride)_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.318077
AKAP12 A kinase (PRKA) anchor protein 12 0.178157
FN1 fibronectin 1 0.138952
FLNA filamin A, alpha 0.13595
CANX calnexin 0.10014
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0918174
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0900423
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0739864
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0730895
PGK1 phosphoglycerate kinase 1 0.0714897
MYH9 myosin, heavy chain 9, non-muscle 0.071292
ICAM1 intercellular adhesion molecule 1 0.0677013
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0630519
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0601435
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0541496
FMNL2 formin-like 2 0.0505789
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0495293
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0493958
SFTPA2 surfactant protein A2 0.0487536
RPS4X ribosomal protein S4, X-linked 0.0465128
SEPTIN9 septin 9 0.0432828
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0429614
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0427406
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0420081
SLC39A11 solute carrier family 39, member 11 0.0419485
RPS3 ribosomal protein S3 0.0418318
PLEC plectin 0.0416516
HSPA8 heat shock 70kDa protein 8 0.0414168
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0402326
SREBF2 sterol regulatory element binding transcription factor 2 0.0400131
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0394764
DSCAM Down syndrome cell adhesion molecule 0.0393914
BACE2 beta-site APP-cleaving enzyme 2 0.0393316
NLGN1 neuroligin 1 0.0390895
KAZN kazrin, periplakin interacting protein 0.0385565
CEP250 centrosomal protein 250kDa 0.0382619
EEF2 eukaryotic translation elongation factor 2 0.0372634
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.0370608
TNNC1 troponin C type 1 (slow) 0.034312
CTTN cortactin 0.033616
MSI2 musashi RNA-binding protein 2 0.031919
SOD2 superoxide dismutase 2, mitochondrial 0.0319145
SERINC1 serine incorporator 1 0.0311686
RPL4 ribosomal protein L4 0.0310395
MCL1 myeloid cell leukemia 1 0.031021
NFE2L1 nuclear factor, erythroid 2-like 1 0.0307996
RPL14 ribosomal protein L14 0.0305973
HLA-E major histocompatibility complex, class I, E 0.030579
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0302531
STK10 serine/threonine kinase 10 0.0295916
TCF20 transcription factor 20 (AR1) 0.0290394
AATF apoptosis antagonizing transcription factor 0.0289266
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0284989
TCOF1 Treacher Collins-Franceschetti syndrome 1 0.0283677
KDM3A lysine (K)-specific demethylase 3A 0.0282696
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0281001
PRELID2 PRELI domain containing 2 0.0278699
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0276997
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0274889
CCDC47 coiled-coil domain containing 47 0.0274783
LAMP2 lysosomal-associated membrane protein 2 0.0271553
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0271323
ALMS1 Alstrom syndrome protein 1 0.0269352
LSAMP limbic system-associated membrane protein 0.0268695
RPL13A ribosomal protein L13a 0.0263759
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0262035
CAMTA1 calmodulin binding transcription activator 1 0.0256068
MSN moesin 0.0253367
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0251215
ACLY ATP citrate lyase 0.0251104
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0247277
RPL7 ribosomal protein L7 0.0239482
DST dystonin 0.0239318
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0238632
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0238577
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.0237004
BHLHE40 basic helix-loop-helix family, member e40 0.0236094
FAM219A family with sequence similarity 219, member A 0.0234809
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0233994
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.023165
ACTN4 actinin, alpha 4 0.0231177
BZW1 basic leucine zipper and W2 domains 1 0.0230753
SND1 staphylococcal nuclease and tudor domain containing 1 0.0227105
ARHGAP5 Rho GTPase activating protein 5 0.022697
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0225952
HDLBP high density lipoprotein binding protein 0.022394
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0223302
ADAR adenosine deaminase, RNA-specific 0.0222866
SUCO SUN domain containing ossification factor 0.0222009
CALR calreticulin 0.0221428
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0219645
PMEL premelanosome protein 0.0214938
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0213636
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 0.0213598
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0213193
YME1L1 YME1-like 1 ATPase 0.0212793
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0210781
TGFBR1 transforming growth factor, beta receptor 1 0.0207179
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0207133
CLIC4 chloride intracellular channel 4 0.0205708

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.18478
POTEF POTE ankyrin domain family, member F -0.0964109
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.095703
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0662677
MT2A metallothionein 2A -0.0641868
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0615025
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0539157
FRMD5 FERM domain containing 5 -0.0487706
CCND1 cyclin D1 -0.0475144
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0436935
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0427918
NDRG1 N-myc downstream regulated 1 -0.0414991
FNDC3B fibronectin type III domain containing 3B -0.0401595
TMSB10 thymosin beta 10 -0.0393318
FTL ferritin, light polypeptide -0.0374498
HMGA1 high mobility group AT-hook 1 -0.0353037
ANKRD28 ankyrin repeat domain 28 -0.0345505
KMT2E lysine (K)-specific methyltransferase 2E -0.0343619
CYB5R3 cytochrome b5 reductase 3 -0.0331852
ACTG1 actin gamma 1 -0.0319809
RNF145 ring finger protein 145 -0.0295188
CCNL1 cyclin L1 -0.0293933
SEPTIN7 septin 7 -0.0292135
VDAC1 voltage-dependent anion channel 1 -0.0286014
RPLP1 ribosomal protein, large, P1 -0.0283595
MAML3 mastermind-like 3 (Drosophila) -0.027572
RPL35A ribosomal protein L35a -0.0271885
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0269242
BPTF bromodomain PHD finger transcription factor -0.0268694
JMJD1C jumonji domain containing 1C -0.0261498
QKI QKI, KH domain containing, RNA binding -0.0256821
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0254396
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0249845
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0245663
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0245321
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0244338
TAGLN2 transgelin 2 -0.024239
LOC112694756 uncharaterized LOC112694756 -0.0242176
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0239449
S100A9 S100 calcium binding protein A9 -0.0236269
PFN1 profilin 1 -0.0235004
PKM pyruvate kinase, muscle -0.0233001
TENM1 teneurin transmembrane protein 1 -0.0232653
PDCD10 programmed cell death 10 -0.022861
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0226711
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0223561
RBM39 RNA binding motif protein 39 -0.0214607
RPL36 ribosomal protein L36 -0.0214028
CHD1 chromodomain helicase DNA binding protein 1 -0.0212524
RHOBTB3 Rho-related BTB domain containing 3 -0.0212036
SEC24A SEC24 family member A -0.0210799
RHEB Ras homolog enriched in brain -0.0208754
CBX3 chromobox homolog 3 -0.020707
S100A10 S100 calcium binding protein A10 -0.0205908
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein -0.0204486
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0203785
RPL28 ribosomal protein L28 -0.0199071
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0199016
RSRC1 arginine/serine-rich coiled-coil 1 -0.0196222
EGR1 early growth response 1 -0.0195399
SOX10 SRY (sex determining region Y)-box 10 -0.0193768
CFAP20DC CFAP20 domain containing -0.0193712
AKAP9 A kinase (PRKA) anchor protein 9 -0.0191249
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like -0.0190529
LOC102724023 ES1 protein homolog, mitochondrial -0.0188679
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0187527
SOX6 SRY (sex determining region Y)-box 6 -0.0187449
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0185252
BZW2 basic leucine zipper and W2 domains 2 -0.0183734
CDK6 cyclin-dependent kinase 6 -0.0183416
PHF21A PHD finger protein 21A -0.0181277
RPLP2 ribosomal protein, large, P2 -0.0180498
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 -0.0179439
WWTR1 WW domain containing transcription regulator 1 -0.0179355
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0179222
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0179199
NOP58 NOP58 ribonucleoprotein -0.0179187
BICD1 bicaudal D homolog 1 (Drosophila) -0.0179159
CPEB2 cytoplasmic polyadenylation element binding protein 2 -0.0177814
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0176341
ARL15 ADP-ribosylation factor-like 15 -0.0176193
SHISA5 shisa family member 5 -0.0176163
MAML2 mastermind-like 2 (Drosophila) -0.017614
NEK1 NIMA-related kinase 1 -0.0175476
RPS6 ribosomal protein S6 -0.0174308
SRPK2 SRSF protein kinase 2 -0.0173124
TOB2 transducer of ERBB2, 2 -0.0171698
ZNF207 zinc finger protein 207 -0.0170822
IER3 immediate early response 3 -0.0168403
DDIT4 DNA-damage-inducible transcript 4 -0.0168135
LINC02798 long intergenic non-protein coding RNA 2798 -0.016611
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0165714
PHF14 PHD finger protein 14 -0.0165202
RPL34 ribosomal protein L34 -0.016498
RPS14 ribosomal protein S14 -0.0164903
FBXO32 F-box protein 32 -0.0161507
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0160401
SBF2 SET binding factor 2 -0.0159938
ZNF292 zinc finger protein 292 -0.0159914
ZMYND8 zinc finger, MYND-type containing 8 -0.0159693