Crizotinib (hydrochloride)_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Crizotinib (hydrochloride) perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Crizotinib (hydrochloride)_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.103572
MYH9 myosin, heavy chain 9, non-muscle 0.0714854
VIM vimentin 0.0644511
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0484062
BHLHE40 basic helix-loop-helix family, member e40 0.0450367
SERINC1 serine incorporator 1 0.0404806
EFNA5 ephrin-A5 0.0395155
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0394134
CALR calreticulin 0.0391841
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0389239
RBM25 RNA binding motif protein 25 0.0385799
PDIA4 protein disulfide isomerase family A, member 4 0.0376609
COL4A2 collagen, type IV, alpha 2 0.0376295
ERRFI1 ERBB receptor feedback inhibitor 1 0.0374209
FLNA filamin A, alpha 0.036677
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0362795
CANX calnexin 0.0357898
IGF2R insulin-like growth factor 2 receptor 0.034499
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0331741
GSE1 Gse1 coiled-coil protein 0.0329974
WDR33 WD repeat domain 33 0.0320903
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0320539
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0319965
TNRC6A trinucleotide repeat containing 6A 0.0319172
RPL3 ribosomal protein L3 0.0316823
SOD2 superoxide dismutase 2, mitochondrial 0.0313147
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.031211
GOLGB1 golgin B1 0.0310159
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0295103
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.0294994
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 0.0294975
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.0294034
RAB7A RAB7A, member RAS oncogene family 0.0293775
APP amyloid beta (A4) precursor protein 0.0290583
COL1A2 collagen, type I, alpha 2 0.0290402
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0290104
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0289585
SQSTM1 sequestosome 1 0.0288146
RAB10 RAB10, member RAS oncogene family 0.0285299
PTBP2 polypyrimidine tract binding protein 2 0.0282708
CLDN12 claudin 12 0.0281986
OGFRL1 opioid growth factor receptor-like 1 0.0281902
LAMB1 laminin, beta 1 0.0280962
ANO6 anoctamin 6 0.0277469
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.027727
CHMP4B charged multivesicular body protein 4B 0.0276155
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0275568
EPS8 epidermal growth factor receptor pathway substrate 8 0.0274006
VIRMA vir like m6A methyltransferase associated 0.0273851
APLP2 amyloid beta (A4) precursor-like protein 2 0.0266321
WASF2 WAS protein family, member 2 0.0265846
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0265784
GANAB glucosidase, alpha; neutral AB 0.0265687
COL6A1 collagen, type VI, alpha 1 0.0263819
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0262513
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0262335
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.0261039
ATP13A3 ATPase type 13A3 0.0260226
DCAF13 DDB1 and CUL4 associated factor 13 0.0258103
SFTPA2 surfactant protein A2 0.025388
ZNF143 zinc finger protein 143 0.0253099
CNOT8 CCR4-NOT transcription complex, subunit 8 0.0252284
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0251875
HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 0.0251008
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.024663
RND3 Rho family GTPase 3 0.0245962
CUL4A cullin 4A 0.0245457
TM4SF1 transmembrane 4 L six family member 1 0.0245374
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.024365
ABI1 abl-interactor 1 0.0242125
LSAMP limbic system-associated membrane protein 0.0240941
NACA nascent polypeptide-associated complex alpha subunit 0.0237296
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase 0.0235812
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0235292
LITAF lipopolysaccharide-induced TNF factor 0.0233782
ZNF451 zinc finger protein 451 0.0233205
FTL ferritin, light polypeptide 0.0232585
ELL2 elongation factor, RNA polymerase II, 2 0.0230994
ALK anaplastic lymphoma receptor tyrosine kinase 0.0230882
RELCH RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing 0.0230631
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0230319
ACVR1 activin A receptor, type I 0.0229837
STX18 syntaxin 18 0.0228882
KDM5C lysine (K)-specific demethylase 5C 0.0227804
THRAP3 thyroid hormone receptor associated protein 3 0.0227483
TRPS1 trichorhinophalangeal syndrome I 0.0225736
ACTR10 actin-related protein 10 homolog (S. cerevisiae) 0.0223822
SLC38A2 solute carrier family 38, member 2 0.0222229
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.021875
CLIC4 chloride intracellular channel 4 0.0217863
TP53BP1 tumor protein p53 binding protein 1 0.0216081
TMEM184B transmembrane protein 184B 0.0216
MICU1 mitochondrial calcium uptake 1 0.021545
UBQLN1 ubiquilin 1 0.0214702
IGFBP5 insulin-like growth factor binding protein 5 0.0214449
CALCOCO2 calcium binding and coiled-coil domain 2 0.0214436
FRMD4B FERM domain containing 4B 0.0213683
WWTR1 WW domain containing transcription regulator 1 0.0212236
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0212194
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0211387

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.188202
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.119881
TIMP3 TIMP metallopeptidase inhibitor 3 -0.116664
IGFBP3 insulin-like growth factor binding protein 3 -0.114124
HLA-B major histocompatibility complex, class I, B -0.112861
MT2A metallothionein 2A -0.0923556
ENO1 enolase 1, (alpha) -0.0892022
TMSB10 thymosin beta 10 -0.0873868
RTN4 reticulon 4 -0.085688
NRXN3 neurexin 3 -0.0739609
TGFBI transforming growth factor, beta-induced, 68kDa -0.0731082
TENT5A terminal nucleotidyltransferase 5A -0.066903
B2M beta-2-microglobulin -0.0600708
LOX lysyl oxidase -0.0595452
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0592279
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0561057
COL1A1 collagen, type I, alpha 1 -0.0535804
EGR1 early growth response 1 -0.0531178
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0526422
ESYT2 extended synaptotagmin-like protein 2 -0.0525189
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0508835
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0489201
SPAG9 sperm associated antigen 9 -0.0485371
EGFR epidermal growth factor receptor -0.0468154
PDIA3 protein disulfide isomerase family A, member 3 -0.0467118
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0465294
KMT2C lysine (K)-specific methyltransferase 2C -0.0460652
CHD9 chromodomain helicase DNA binding protein 9 -0.0458818
FTH1 ferritin, heavy polypeptide 1 -0.0454654
USP34 ubiquitin specific peptidase 34 -0.0450968
ZNF395 zinc finger protein 395 -0.0445287
CALD1 caldesmon 1 -0.0436552
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.041488
HIP1 huntingtin interacting protein 1 -0.0405557
TPM1 tropomyosin 1 (alpha) -0.0403996
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0402359
POTEF POTE ankyrin domain family, member F -0.0399532
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0396983
CDK6 cyclin-dependent kinase 6 -0.0395984
MBD5 methyl-CpG binding domain protein 5 -0.0394449
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0393683
PSD3 pleckstrin and Sec7 domain containing 3 -0.0386853
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0384649
STC1 stanniocalcin 1 -0.03791
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0375963
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0372895
ADM adrenomedullin -0.0360655
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0358483
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0355354
DPYD dihydropyrimidine dehydrogenase -0.0354519
ANKRD12 ankyrin repeat domain 12 -0.0351646
EIF1 eukaryotic translation initiation factor 1 -0.0351465
CALU calumenin -0.0347356
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0347151
GLIS3 GLIS family zinc finger 3 -0.0346377
IL6 interleukin 6 -0.0346334
CADM1 cell adhesion molecule 1 -0.034512
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0343861
RAD51B RAD51 paralog B -0.0343131
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0341652
NAV1 neuron navigator 1 -0.0340296
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0334777
ACTG1 actin gamma 1 -0.0332188
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0332179
PNRC1 proline-rich nuclear receptor coactivator 1 -0.032967
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0329072
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0326702
HMGA2 high mobility group AT-hook 2 -0.0318096
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0313392
RAI14 retinoic acid induced 14 -0.0311471
SYNPO synaptopodin -0.0311061
ADAM9 ADAM metallopeptidase domain 9 -0.0307405
MEF2A myocyte enhancer factor 2A -0.0306161
RAB1A RAB1A, member RAS oncogene family -0.0305142
PRRC2C proline-rich coiled-coil 2C -0.0301906
PDE10A phosphodiesterase 10A -0.0300909
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0295667
EXOC4 exocyst complex component 4 -0.0294134
RPL36 ribosomal protein L36 -0.0289964
KIF13A kinesin family member 13A -0.0289724
ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 -0.0289073
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) -0.0287384
BBX bobby sox homolog (Drosophila) -0.0286687
RPS6 ribosomal protein S6 -0.028462
QKI QKI, KH domain containing, RNA binding -0.0283075
C1D C1D nuclear receptor corepressor -0.0282878
BABAM2 BRISC and BRCA1 A complex member 2 -0.0282478
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0281643
ATXN1 ataxin 1 -0.0281396
MYOF myoferlin -0.0277304
VEGFC vascular endothelial growth factor C -0.0273824
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0272657
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0272226
DLG1 discs, large homolog 1 (Drosophila) -0.0272018
FAM3C family with sequence similarity 3, member C -0.0271994
KDM6A lysine (K)-specific demethylase 6A -0.0269769
MAP1B microtubule-associated protein 1B -0.0268795
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0267527
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0265663
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -0.026528