Cyclosporin A_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.142393
EEF2 eukaryotic translation elongation factor 2 0.119277
ERRFI1 ERBB receptor feedback inhibitor 1 0.0798545
ANXA1 annexin A1 0.0681439
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0660319
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0609609
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0534714
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0491846
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0473249
ADAM17 ADAM metallopeptidase domain 17 0.0440209
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0410093
NCAPD2 non-SMC condensin I complex, subunit D2 0.0409854
RPL3 ribosomal protein L3 0.0396357
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0395618
TXNRD1 thioredoxin reductase 1 0.0391953
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0386451
CSNK1A1 casein kinase 1, alpha 1 0.0380758
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0376951
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0376559
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0354543
ARID1A AT rich interactive domain 1A (SWI-like) 0.0354191
TPM3 tropomyosin 3 0.0352259
CAMTA1 calmodulin binding transcription activator 1 0.0352061
SREBF2 sterol regulatory element binding transcription factor 2 0.034836
KMT2D lysine (K)-specific methyltransferase 2D 0.0347696
WNK1 WNK lysine deficient protein kinase 1 0.0340816
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0333692
EIF4B eukaryotic translation initiation factor 4B 0.0333513
VMP1 vacuole membrane protein 1 0.0331759
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0329052
CPOX coproporphyrinogen oxidase 0.0319594
SPATS2 spermatogenesis associated, serine-rich 2 0.0319075
SRRM2 serine/arginine repetitive matrix 2 0.0311454
PLEC plectin 0.0306968
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0305426
NONO non-POU domain containing, octamer-binding 0.0302462
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.0292652
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.028674
RRM2 ribonucleotide reductase M2 0.0282695
GABARAPL1 GABA(A) receptor-associated protein like 1 0.027475
BIRC6 baculoviral IAP repeat containing 6 0.0272608
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 0.0272178
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0268964
MED13L mediator complex subunit 13-like 0.0265642
ATP11A ATPase, class VI, type 11A 0.0262286
YEATS2 YEATS domain containing 2 0.0258655
FUS FUS RNA binding protein 0.0254901
EGR1 early growth response 1 0.025484
EGLN1 egl-9 family hypoxia-inducible factor 1 0.02502
CEP250 centrosomal protein 250kDa 0.0249959
USP9X ubiquitin specific peptidase 9, X-linked 0.0245819
LOC112694756 uncharaterized LOC112694756 0.0241909
HSPA8 heat shock 70kDa protein 8 0.0240861
UBA6 ubiquitin-like modifier activating enzyme 6 0.0240322
PNN pinin, desmosome associated protein 0.0239261
NUP58 nucleoporin 58 0.0237505
NFE2L1 nuclear factor, erythroid 2-like 1 0.0236204
KDM4C lysine (K)-specific demethylase 4C 0.0230414
PRRC2A proline-rich coiled-coil 2A 0.0229384
DCAF6 DDB1 and CUL4 associated factor 6 0.0227623
KLC1 kinesin light chain 1 0.0224228
MYH9 myosin, heavy chain 9, non-muscle 0.0223619
ARRDC3 arrestin domain containing 3 0.0222614
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0219776
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0219328
RAB6A RAB6A, member RAS oncogene family 0.0219297
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0219081
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.021883
YBX1 Y box binding protein 1 0.0217469
MACF1 microtubule-actin crosslinking factor 1 0.0217256
PREPL prolyl endopeptidase-like 0.0214997
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0214808
CDK19 cyclin-dependent kinase 19 0.0213925
SESN2 sestrin 2 0.0212925
KLHL24 kelch-like family member 24 0.0212708
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0212359
SETD5 SET domain containing 5 0.0208967
PCM1 pericentriolar material 1 0.0208837
MARS1 methionyl-tRNA synthetase 1 0.0208758
H1-0 H1.0 linker histone 0.0208449
CEP192 centrosomal protein 192kDa 0.0207699
CLDND1 claudin domain containing 1 0.0206841
MTCL1 microtubule crosslinking factor 1 0.0205776
FXR1 fragile X mental retardation, autosomal homolog 1 0.020517
LEMD3 LEM domain containing 3 0.0204309
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0201481
DCTN1 dynactin 1 0.0200917
TMEM41B transmembrane protein 41B 0.019837
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0197467
GIGYF2 GRB10 interacting GYF protein 2 0.0194436
TBK1 TANK-binding kinase 1 0.0193757
HSPA4 heat shock 70kDa protein 4 0.0192437
HELZ helicase with zinc finger 0.0191968
CALCOCO2 calcium binding and coiled-coil domain 2 0.0191746
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0190626
DBN1 drebrin 1 0.0190458
TFG TRK-fused gene 0.0189767
RAD23B RAD23 homolog B (S. cerevisiae) 0.0189643
NUMA1 nuclear mitotic apparatus protein 1 0.0189557
KPNB1 karyopherin (importin) beta 1 0.0189243

decreased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.194626
NLGN1 neuroligin 1 -0.141853
TMSB10 thymosin beta 10 -0.12621
PDE4D phosphodiesterase 4D, cAMP-specific -0.113444
PCDH7 protocadherin 7 -0.0878709
CELF2 CUGBP, Elav-like family member 2 -0.0855759
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0743669
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0739217
ZNF804A zinc finger protein 804A -0.0718708
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0712323
VIM vimentin -0.0602463
HMGA2 high mobility group AT-hook 2 -0.0547645
SMC4 structural maintenance of chromosomes 4 -0.0504631
DPYD dihydropyrimidine dehydrogenase -0.0496818
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0486117
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0446617
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.043704
AHNAK AHNAK nucleoprotein -0.0434353
CCND1 cyclin D1 -0.0424717
BIRC3 baculoviral IAP repeat containing 3 -0.0417416
CDK6 cyclin-dependent kinase 6 -0.0415085
SLC38A2 solute carrier family 38, member 2 -0.0403703
MYL12B myosin, light chain 12B, regulatory -0.0402601
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0393805
RPL35A ribosomal protein L35a -0.0385502
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0383716
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0372967
DLC1 DLC1 Rho GTPase activating protein -0.0368975
RPS6 ribosomal protein S6 -0.0361846
DST dystonin -0.0350488
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0342007
FTL ferritin, light polypeptide -0.0341231
NABP1 nucleic acid binding protein 1 -0.0332606
HMGA1 high mobility group AT-hook 1 -0.03286
CLDN1 claudin 1 -0.0310236
MYPN myopalladin -0.0302664
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0300778
RPLP1 ribosomal protein, large, P1 -0.0298668
CMIP c-Maf inducing protein -0.0297808
RASAL2 RAS protein activator like 2 -0.0291719
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0283791
EDN1 endothelin 1 -0.0281168
CEP112 centrosomal protein 112kDa -0.0274093
CCDC88A coiled-coil domain containing 88A -0.0273629
NAP1L1 nucleosome assembly protein 1-like 1 -0.0271186
TPT1 tumor protein, translationally-controlled 1 -0.026857
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0264648
TAS2R14 taste receptor, type 2, member 14 -0.025942
ADGRG6 adhesion G protein-coupled receptor G6 -0.0257229
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0256387
SYT1 synaptotagmin I -0.0252995
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.025083
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0247474
ZNF638 zinc finger protein 638 -0.0246595
CENPF centromere protein F, 350/400kDa -0.0243582
RPS24 ribosomal protein S24 -0.0242354
ACTG1 actin gamma 1 -0.0239587
ANKRD12 ankyrin repeat domain 12 -0.0238972
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0233155
SOS1 son of sevenless homolog 1 (Drosophila) -0.0232297
RPS27A ribosomal protein S27a -0.0231676
CCSER1 coiled-coil serine-rich protein 1 -0.0230646
NCEH1 neutral cholesterol ester hydrolase 1 -0.0226972
RIMS2 regulating synaptic membrane exocytosis 2 -0.0226345
CNRIP1 cannabinoid receptor interacting protein 1 -0.0225286
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0222629
LOC102724023 ES1 protein homolog, mitochondrial -0.0222391
TBCA tubulin folding cofactor A -0.022065
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0220173
EIF5B eukaryotic translation initiation factor 5B -0.0220003
RPS16 ribosomal protein S16 -0.0219308
PDGFC platelet derived growth factor C -0.0216128
EDARADD EDAR-associated death domain -0.0214934
ATP5F1B ATP synthase F1 subunit beta -0.0210781
NEGR1 neuronal growth regulator 1 -0.021078
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0210383
SCLT1 sodium channel and clathrin linker 1 -0.0207816
RANBP17 RAN binding protein 17 -0.0204569
EFNA5 ephrin-A5 -0.0203961
MMP12 matrix metallopeptidase 12 -0.0203218
CENPE centromere protein E, 312kDa -0.0201889
L3MBTL4 l(3)mbt-like 4 (Drosophila) -0.0200539
ERBIN erbb2 interacting protein -0.019828
ECT2 epithelial cell transforming 2 -0.0197735
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0195799
IFIH1 interferon induced with helicase C domain 1 -0.0194902
PHACTR4 phosphatase and actin regulator 4 -0.0194829
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.019394
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0193926
LMO7 LIM domain 7 -0.0193802
GNAS GNAS complex locus -0.0193302
LDHB lactate dehydrogenase B -0.0192744
SETX senataxin -0.0192109
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0191849
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0191384
VDAC1 voltage-dependent anion channel 1 -0.0191211
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0191161
NFE2L2 nuclear factor, erythroid 2-like 2 -0.019103
RPL28 ribosomal protein L28 -0.0190319
RPL4 ribosomal protein L4 -0.0189015