Cyclosporin A_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VEGFA vascular endothelial growth factor A 0.227195
PABPC1 poly(A) binding protein, cytoplasmic 1 0.130186
EEF2 eukaryotic translation elongation factor 2 0.0973478
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0906719
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0808588
RPL3 ribosomal protein L3 0.0658553
FLNB filamin B, beta 0.0572715
EGR1 early growth response 1 0.0567457
NCOR2 nuclear receptor corepressor 2 0.0530139
NUMA1 nuclear mitotic apparatus protein 1 0.0466302
FLNA filamin A, alpha 0.046151
BTBD3 BTB (POZ) domain containing 3 0.0447118
FN1 fibronectin 1 0.0443072
PRELID2 PRELI domain containing 2 0.0440369
MACF1 microtubule-actin crosslinking factor 1 0.0429991
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0413886
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 0.0403405
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0401848
BBX bobby sox homolog (Drosophila) 0.0398506
GSE1 Gse1 coiled-coil protein 0.0378921
SIK3 SIK family kinase 3 0.0377735
FNIP1 folliculin interacting protein 1 0.037056
CDK19 cyclin-dependent kinase 19 0.0358704
DBN1 drebrin 1 0.035807
CEP250 centrosomal protein 250kDa 0.0356611
TMSB4X thymosin beta 4, X-linked 0.0355807
ZMIZ1 zinc finger, MIZ-type containing 1 0.0353783
MED13L mediator complex subunit 13-like 0.035057
MYH9 myosin, heavy chain 9, non-muscle 0.0348491
BHLHE40 basic helix-loop-helix family, member e40 0.0344007
KMT2C lysine (K)-specific methyltransferase 2C 0.0341801
QKI QKI, KH domain containing, RNA binding 0.0340583
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0338919
TNIP1 TNFAIP3 interacting protein 1 0.0334575
MEST mesoderm specific transcript 0.033278
ARID1A AT rich interactive domain 1A (SWI-like) 0.0325525
USP9X ubiquitin specific peptidase 9, X-linked 0.032502
RAD23B RAD23 homolog B (S. cerevisiae) 0.032338
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0319254
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0316892
PTPRF protein tyrosine phosphatase, receptor type, F 0.0312588
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0308652
CSNK1A1 casein kinase 1, alpha 1 0.0306157
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0305013
ZNF516 zinc finger protein 516 0.0304934
SFTPA2 surfactant protein A2 0.0303034
SRRM2 serine/arginine repetitive matrix 2 0.0300186
PLEC plectin 0.0295483
RAD51B RAD51 paralog B 0.0295122
KIF1A kinesin family member 1A 0.0293934
MYOF myoferlin 0.0291119
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0287749
HIPK2 homeodomain interacting protein kinase 2 0.0277141
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0273227
THSD4 thrombospondin, type I, domain containing 4 0.0271102
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0270652
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0268321
FAM13A family with sequence similarity 13, member A 0.0267382
PRRC2A proline-rich coiled-coil 2A 0.0266219
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0261567
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0257359
NDRG1 N-myc downstream regulated 1 0.0253976
COPA coatomer protein complex, subunit alpha 0.0252671
MED15 mediator complex subunit 15 0.0248835
APLP2 amyloid beta (A4) precursor-like protein 2 0.0247509
SREBF2 sterol regulatory element binding transcription factor 2 0.0246792
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0246534
NUP58 nucleoporin 58 0.0242042
KDM4C lysine (K)-specific demethylase 4C 0.0241487
APP amyloid beta (A4) precursor protein 0.0241391
TRERF1 transcriptional regulating factor 1 0.0241329
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.024086
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0238912
NFYA nuclear transcription factor Y, alpha 0.0236451
ATXN2L ataxin 2-like 0.0231865
AKAP9 A kinase (PRKA) anchor protein 9 0.0231633
RYBP RING1 and YY1 binding protein 0.0229583
SMTN smoothelin 0.0227535
RAB6A RAB6A, member RAS oncogene family 0.0227317
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0225914
EGFR epidermal growth factor receptor 0.0225639
GSN gelsolin 0.0223924
FEM1C fem-1 homolog c (C. elegans) 0.0223898
NUDCD3 NudC domain containing 3 0.0223397
SQSTM1 sequestosome 1 0.0218272
DDIT4 DNA-damage-inducible transcript 4 0.0217191
IGF2 insulin-like growth factor 2 0.0214895
PDE10A phosphodiesterase 10A 0.0214751
PLS3 plastin 3 0.0214289
SKIL SKI-like proto-oncogene 0.0214183
FAR1 fatty acyl CoA reductase 1 0.0213517
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0213423
UBA6 ubiquitin-like modifier activating enzyme 6 0.0211602
FUS FUS RNA binding protein 0.0211159
ZNF451 zinc finger protein 451 0.021113
CLEC16A C-type lectin domain family 16, member A 0.0210999
SSBP3 single stranded DNA binding protein 3 0.0209734
TOP2B topoisomerase (DNA) II beta 180kDa 0.0208268
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.020774
KMT2E lysine (K)-specific methyltransferase 2E 0.0207426

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.261096
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.130389
PEG10 paternally expressed 10 -0.112672
MGP matrix Gla protein -0.0906677
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0872386
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0870577
RPLP1 ribosomal protein, large, P1 -0.0821344
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0813035
TMSB10 thymosin beta 10 -0.0717634
RPS6 ribosomal protein S6 -0.0676361
RPS24 ribosomal protein S24 -0.0667623
ENO1 enolase 1, (alpha) -0.0652841
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0639647
PTMA prothymosin, alpha -0.0639309
PRKG1 protein kinase, cGMP-dependent, type I -0.0605369
TPT1 tumor protein, translationally-controlled 1 -0.0602597
RPS8 ribosomal protein S8 -0.0573614
RPL26 ribosomal protein L26 -0.0569868
HMGB1 high mobility group box 1 -0.0559833
RPS27A ribosomal protein S27a -0.0559007
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0526459
UBC ubiquitin C -0.050868
LDHA lactate dehydrogenase A -0.0501448
RPLP2 ribosomal protein, large, P2 -0.0483539
IER3 immediate early response 3 -0.0479838
RPL12 ribosomal protein L12 -0.0467223
RPS2 ribosomal protein S2 -0.0463548
RBM25 RNA binding motif protein 25 -0.046082
MT2A metallothionein 2A -0.0448978
RPS4X ribosomal protein S4, X-linked -0.0445057
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0431425
PCBP2 poly(rC) binding protein 2 -0.0429669
RPL34 ribosomal protein L34 -0.0419796
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0405389
DEK DEK proto-oncogene -0.0397216
RPL23 ribosomal protein L23 -0.039313
AHNAK AHNAK nucleoprotein -0.0366993
FTL ferritin, light polypeptide -0.0363492
RPL31 ribosomal protein L31 -0.035766
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0355476
RPS20 ribosomal protein S20 -0.0353776
PDE4D phosphodiesterase 4D, cAMP-specific -0.0342757
RPS23 ribosomal protein S23 -0.0339339
HMGA2 high mobility group AT-hook 2 -0.0336449
RPL36 ribosomal protein L36 -0.0335898
RPL35A ribosomal protein L35a -0.0332593
COL1A2 collagen, type I, alpha 2 -0.0330214
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0324533
RANBP17 RAN binding protein 17 -0.0321333
RPL28 ribosomal protein L28 -0.0317784
ACTG1 actin gamma 1 -0.0314792
RPS25 ribosomal protein S25 -0.0313373
SEPTIN11 septin 11 -0.0310602
CENPE centromere protein E, 312kDa -0.0310329
RPS5 ribosomal protein S5 -0.031006
RPS3 ribosomal protein S3 -0.0305443
RPL37A ribosomal protein L37a -0.0303027
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0296421
RPS14 ribosomal protein S14 -0.0296158
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.029199
SMC4 structural maintenance of chromosomes 4 -0.0288032
RPL5 ribosomal protein L5 -0.0287769
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0285334
S100A9 S100 calcium binding protein A9 -0.0285311
EXOC6B exocyst complex component 6B -0.0284238
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0282582
FBXL17 F-box and leucine-rich repeat protein 17 -0.0280608
YBX1 Y box binding protein 1 -0.0280207
RPL13A ribosomal protein L13a -0.0277388
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0277074
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0275572
GMDS GDP-mannose 4,6-dehydratase -0.0274632
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0273048
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0272139
RPL8 ribosomal protein L8 -0.0271467
CADM2 cell adhesion molecule 2 -0.0266694
SOS1 son of sevenless homolog 1 (Drosophila) -0.026646
RPS16 ribosomal protein S16 -0.0266189
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0265102
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.026441
BCAS3 breast carcinoma amplified sequence 3 -0.0263352
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0259496
NOP58 NOP58 ribonucleoprotein -0.0257303
RPS13 ribosomal protein S13 -0.0255196
DUSP6 dual specificity phosphatase 6 -0.0252542
RPS29 ribosomal protein S29 -0.0250559
HMGA1 high mobility group AT-hook 1 -0.0249617
RPS21 ribosomal protein S21 -0.0249032
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0247888
ARB2A ARB2 cotranscriptional regulator A -0.0247875
CENPF centromere protein F, 350/400kDa -0.0246524
MATR3 matrin 3 -0.0245273
RPL19 ribosomal protein L19 -0.0243888
DIAPH3 diaphanous-related formin 3 -0.0242734
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0240703
TRA2A transformer 2 alpha homolog (Drosophila) -0.0240085
PCM1 pericentriolar material 1 -0.0239907
UBE3C ubiquitin protein ligase E3C -0.0238381
KPNB1 karyopherin (importin) beta 1 -0.0238315
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0235918