Cyclosporin A_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 0.204272
NDRG1 N-myc downstream regulated 1 0.11417
CEP250 centrosomal protein 250kDa 0.113485
GRB10 growth factor receptor-bound protein 10 0.0828852
NCOA3 nuclear receptor coactivator 3 0.076138
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0740098
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0672526
VEGFA vascular endothelial growth factor A 0.0662522
ACSS2 acyl-CoA synthetase short-chain family member 2 0.064369
FBXL20 F-box and leucine-rich repeat protein 20 0.063353
ITCH itchy E3 ubiquitin protein ligase 0.0628926
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0606616
ESYT2 extended synaptotagmin-like protein 2 0.0559157
RAB6A RAB6A, member RAS oncogene family 0.054252
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0535484
SREBF2 sterol regulatory element binding transcription factor 2 0.0490435
TPD52 tumor protein D52 0.0476256
FAM13A family with sequence similarity 13, member A 0.0423742
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.042314
CCNY cyclin Y 0.0421926
TMEM123 transmembrane protein 123 0.0413502
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0406135
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0404872
DTNA dystrobrevin, alpha 0.0390829
ZHX2 zinc fingers and homeoboxes 2 0.0388403
WSB1 WD repeat and SOCS box containing 1 0.0382423
ZNF292 zinc finger protein 292 0.0377857
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0375145
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0373254
KDM3A lysine (K)-specific demethylase 3A 0.0373139
HOOK2 hook microtubule-tethering protein 2 0.0368431
KDM2A lysine (K)-specific demethylase 2A 0.0362586
FLNB filamin B, beta 0.0361437
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 0.0359777
GNPDA1 glucosamine-6-phosphate deaminase 1 0.035862
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.035178
COPA coatomer protein complex, subunit alpha 0.0349623
KDM5B lysine (K)-specific demethylase 5B 0.0345706
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0333876
SLC22A23 solute carrier family 22, member 23 0.033368
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0332335
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0324979
AKAP9 A kinase (PRKA) anchor protein 9 0.0317851
MYH9 myosin, heavy chain 9, non-muscle 0.0314283
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0313062
SRP54 signal recognition particle 54kDa 0.0303206
CANX calnexin 0.0302817
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0298272
EGFR epidermal growth factor receptor 0.029781
PLEC plectin 0.0289624
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0287344
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 0.0286286
RICTOR RPTOR independent companion of MTOR, complex 2 0.0275222
GOLGA4 golgin A4 0.0274801
TRIO trio Rho guanine nucleotide exchange factor 0.0272559
PRELID2 PRELI domain containing 2 0.0271868
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0271428
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0271408
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0266348
NCOA6 nuclear receptor coactivator 6 0.0265654
SCFD1 sec1 family domain containing 1 0.0261551
KIF1A kinesin family member 1A 0.0261049
TOP6BL TOP6B like initiator of meiotic double strand breaks 0.0258571
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0258034
BAIAP2L1 BAI1-associated protein 2-like 1 0.0254913
ZFAND3 zinc finger, AN1-type domain 3 0.0254496
LPP LIM domain containing preferred translocation partner in lipoma 0.0253199
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.0252667
KMT2E lysine (K)-specific methyltransferase 2E 0.0252535
SQSTM1 sequestosome 1 0.025102
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 0.0249583
ANKRD11 ankyrin repeat domain 11 0.0247397
TMEM165 transmembrane protein 165 0.0246907
BACE2 beta-site APP-cleaving enzyme 2 0.0245523
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.024463
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.024361
MACF1 microtubule-actin crosslinking factor 1 0.0240758
FNBP4 formin binding protein 4 0.0240702
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0240674
SEC23A Sec23 homolog A (S. cerevisiae) 0.0239359
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0237341
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.023655
TTC3 tetratricopeptide repeat domain 3 0.0236495
PDIA3 protein disulfide isomerase family A, member 3 0.0232032
EMSY EMSY transcriptional repressor, BRCA2 interacting 0.0231578
MYO9B myosin IXB 0.0229216
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0225386
FDPS farnesyl diphosphate synthase 0.0225068
CLMN calmin (calponin-like, transmembrane) 0.0224457
FOXO3 forkhead box O3 0.0224173
TAC4 tachykinin 4 (hemokinin) 0.0222546
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0219846
TOM1L1 target of myb1 (chicken)-like 1 0.021966
ZCCHC7 zinc finger, CCHC domain containing 7 0.0218943
USO1 USO1 vesicle transport factor 0.0218601
INHBA inhibin, beta A 0.0217393
RBM39 RNA binding motif protein 39 0.0215393
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0213615
FNIP1 folliculin interacting protein 1 0.0210648
TMEM41B transmembrane protein 41B 0.0209743

decreased expression

Symbol Name Standardized Value
RPL23 ribosomal protein L23 -0.240724
RPL19 ribosomal protein L19 -0.168587
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.121001
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0843506
CATSPERB catsper channel auxiliary subunit beta -0.0817824
CDK12 cyclin-dependent kinase 12 -0.0732237
THSD4 thrombospondin, type I, domain containing 4 -0.0682373
TRPS1 trichorhinophalangeal syndrome I -0.0581546
ASPH aspartate beta-hydroxylase -0.056941
TMSB10 thymosin beta 10 -0.0545076
VMP1 vacuole membrane protein 1 -0.0532604
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0496982
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.045572
S100A9 S100 calcium binding protein A9 -0.0423847
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0410369
RIMS2 regulating synaptic membrane exocytosis 2 -0.0399994
SMYD3 SET and MYND domain containing 3 -0.0384413
NTN4 netrin 4 -0.0372975
ERBB2 erb-b2 receptor tyrosine kinase 2 -0.0364123
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0347796
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.034675
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0340566
POTEF POTE ankyrin domain family, member F -0.033672
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0315899
RPS3 ribosomal protein S3 -0.0309841
AHR aryl hydrocarbon receptor -0.0305444
CCND1 cyclin D1 -0.0303176
ANKRD36C ankyrin repeat domain 36C -0.0302081
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0301925
RPL12 ribosomal protein L12 -0.0298673
CDH15 cadherin 15, type 1, M-cadherin (myotubule) -0.0296677
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0292496
DUSP4 dual specificity phosphatase 4 -0.0289612
PRR11 proline rich 11 -0.028586
S100A8 S100 calcium binding protein A8 -0.0285142
IL1RAPL2 interleukin 1 receptor accessory protein-like 2 -0.0283909
MYL12B myosin, light chain 12B, regulatory -0.0270204
ENAH enabled homolog (Drosophila) -0.0266425
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0264532
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0250665
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 -0.0250184
ACACA acetyl-CoA carboxylase alpha -0.024989
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0248284
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) -0.0248035
OSMR oncostatin M receptor -0.0245311
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0241122
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0238452
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.0238021
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0234844
VAV3 vav 3 guanine nucleotide exchange factor -0.0234047
CD24 CD24 molecule -0.0232122
RPL32 ribosomal protein L32 -0.0229657
LY6E lymphocyte antigen 6 complex, locus E -0.0228857
MT2A metallothionein 2A -0.0227025
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0226259
RPS8 ribosomal protein S8 -0.022592
PBX3 pre-B-cell leukemia homeobox 3 -0.0223722
TP53INP2 tumor protein p53 inducible nuclear protein 2 -0.0220925
AUTS2 autism susceptibility candidate 2 -0.0220277
TC2N tandem C2 domains, nuclear -0.0219875
S100P S100 calcium binding protein P -0.0219085
TUBA1B tubulin, alpha 1b -0.0213319
RPL35A ribosomal protein L35a -0.0212286
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0210736
CBX3 chromobox homolog 3 -0.0210255
RPS24 ribosomal protein S24 -0.0208624
FOXP1 forkhead box P1 -0.0207706
DYNLRB1 dynein, light chain, roadblock-type 1 -0.0205837
NCOA7 nuclear receptor coactivator 7 -0.0204886
RPS19 ribosomal protein S19 -0.0204264
RPL11 ribosomal protein L11 -0.02019
RPS21 ribosomal protein S21 -0.0198134
SGMS1 sphingomyelin synthase 1 -0.0197598
RPL35 ribosomal protein L35 -0.0196933
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.019658
SYAP1 synapse associated protein 1 -0.0196556
MED13L mediator complex subunit 13-like -0.019521
RPS14 ribosomal protein S14 -0.0195008
BCAS1 breast carcinoma amplified sequence 1 -0.0194183
NRIP1 nuclear receptor interacting protein 1 -0.0194134
MDK midkine (neurite growth-promoting factor 2) -0.0193171
NCAM2 neural cell adhesion molecule 2 -0.0187436
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 -0.0186236
RPS5 ribosomal protein S5 -0.0185013
TTC6 tetratricopeptide repeat domain 6 -0.0184983
ANKRD30A ankyrin repeat domain 30A -0.0182363
S100A14 S100 calcium binding protein A14 -0.0182362
CNRIP1 cannabinoid receptor interacting protein 1 -0.0182233
RPS17 ribosomal protein S17 -0.018132
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0180172
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0178689
CEMIP2 cell migration inducing hyaluronidase 2 -0.0178134
TPT1 tumor protein, translationally-controlled 1 -0.017709
ADAM10 ADAM metallopeptidase domain 10 -0.0176763
TPI1 triosephosphate isomerase 1 -0.0176547
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0176501
CLDN7 claudin 7 -0.0176034
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 -0.0175702
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0175518
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0168285