Cyclosporin A_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.123267
FN1 fibronectin 1 0.120416
CD109 CD109 molecule 0.116121
COPA coatomer protein complex, subunit alpha 0.0712273
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0676703
KMT2C lysine (K)-specific methyltransferase 2C 0.0628176
CABIN1 calcineurin binding protein 1 0.0618993
BHLHE40 basic helix-loop-helix family, member e40 0.0609451
EEF2 eukaryotic translation elongation factor 2 0.0605684
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0594607
VGF VGF nerve growth factor inducible 0.0540813
ICAM1 intercellular adhesion molecule 1 0.0538781
NUP58 nucleoporin 58 0.0518007
VEGFA vascular endothelial growth factor A 0.0514482
ESYT2 extended synaptotagmin-like protein 2 0.0491026
INSIG1 insulin induced gene 1 0.0490319
NAV2 neuron navigator 2 0.0489989
IGFBP3 insulin-like growth factor binding protein 3 0.048892
SREBF2 sterol regulatory element binding transcription factor 2 0.0475278
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0472688
MYH9 myosin, heavy chain 9, non-muscle 0.0460041
MACF1 microtubule-actin crosslinking factor 1 0.0457108
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.044843
NBAS neuroblastoma amplified sequence 0.0441381
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0432754
ASPH aspartate beta-hydroxylase 0.0426555
EGR1 early growth response 1 0.0425803
KMT2E lysine (K)-specific methyltransferase 2E 0.0420458
APP amyloid beta (A4) precursor protein 0.0405198
PTK2 protein tyrosine kinase 2 0.0405034
MIDEAS mitotic deacetylase associated SANT domain protein 0.0392628
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0388273
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0375606
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0375147
P4HB prolyl 4-hydroxylase, beta polypeptide 0.037036
LOC112694756 uncharaterized LOC112694756 0.0365823
MRTFA myocardin related transcription factor A 0.0362754
FLNB filamin B, beta 0.0361458
TAC4 tachykinin 4 (hemokinin) 0.0360992
FMNL2 formin-like 2 0.0360855
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0356823
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.035642
SFTPA2 surfactant protein A2 0.034863
ACTN1 actinin, alpha 1 0.0346515
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0344577
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0344128
SETD5 SET domain containing 5 0.034313
ZYX zyxin 0.0336319
UBE2H ubiquitin-conjugating enzyme E2H 0.0335677
CDK19 cyclin-dependent kinase 19 0.0333808
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0331463
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0331322
PLEC plectin 0.0321317
DSCAM Down syndrome cell adhesion molecule 0.0319377
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.031825
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0314589
PHF21A PHD finger protein 21A 0.0314285
SEPTIN9 septin 9 0.0306635
ZMIZ1 zinc finger, MIZ-type containing 1 0.0302885
MED15 mediator complex subunit 15 0.0302793
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0301122
TBC1D22A TBC1 domain family, member 22A 0.0298922
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0298357
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0296548
CSNK1A1 casein kinase 1, alpha 1 0.0295563
RBM33 RNA binding motif protein 33 0.0292906
CHSY1 chondroitin sulfate synthase 1 0.0284279
UBA6 ubiquitin-like modifier activating enzyme 6 0.0282041
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0281146
PKM pyruvate kinase, muscle 0.0277938
PRELID2 PRELI domain containing 2 0.0274769
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0274698
EP300 E1A binding protein p300 0.0274029
APLP2 amyloid beta (A4) precursor-like protein 2 0.0272735
RPL3 ribosomal protein L3 0.0272236
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0270058
FLNA filamin A, alpha 0.0270002
PTPRF protein tyrosine phosphatase, receptor type, F 0.0268882
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0268381
CDC73 cell division cycle 73 0.0265577
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0264699
POM121 POM121 transmembrane nucleoporin 0.0262106
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0255232
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0252622
NPC1 Niemann-Pick disease, type C1 0.0247589
SRRM2 serine/arginine repetitive matrix 2 0.024727
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0244242
SRPK2 SRSF protein kinase 2 0.0242555
AFDN afadin, adherens junction formation factor 0.0240894
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0240775
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0239528
CEP250 centrosomal protein 250kDa 0.0239159
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0238415
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0237939
SSBP3 single stranded DNA binding protein 3 0.0236752
TMEM178B transmembrane protein 178B 0.0236072
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0235797
HELZ helicase with zinc finger 0.0234873
STXBP1 syntaxin binding protein 1 0.0234808
TPR translocated promoter region, nuclear basket protein 0.0233626

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.113772
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.085977
VIM vimentin -0.0841139
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.081884
NLGN1 neuroligin 1 -0.0597498
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0589434
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0569753
TMSB10 thymosin beta 10 -0.045923
IFI16 interferon, gamma-inducible protein 16 -0.0446159
GPC6 glypican 6 -0.0412537
IER3 immediate early response 3 -0.0375233
MACROD2 MACRO domain containing 2 -0.036735
NAV3 neuron navigator 3 -0.03487
RPLP1 ribosomal protein, large, P1 -0.0310253
FRMD4A FERM domain containing 4A -0.0306239
S100A6 S100 calcium binding protein A6 -0.0283655
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0276917
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0273864
HMCN1 hemicentin 1 -0.0241644
MT2A metallothionein 2A -0.0210771
FMN1 formin 1 -0.0208167
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0207969
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0202734
AHNAK AHNAK nucleoprotein -0.0202044
FRMD5 FERM domain containing 5 -0.0197358
EHBP1 EH domain binding protein 1 -0.0196156
IGFBP5 insulin-like growth factor binding protein 5 -0.0194308
HMGA2 high mobility group AT-hook 2 -0.0190849
TMEM123 transmembrane protein 123 -0.0182185
DCT dopachrome tautomerase -0.0177466
ACTG1 actin gamma 1 -0.0176393
IFITM3 interferon induced transmembrane protein 3 -0.0173141
PTMA prothymosin, alpha -0.0169357
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0169131
TPT1 tumor protein, translationally-controlled 1 -0.0167807
MMP16 matrix metallopeptidase 16 (membrane-inserted) -0.0166398
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0165936
LSAMP limbic system-associated membrane protein -0.0164236
PDIA4 protein disulfide isomerase family A, member 4 -0.016196
RPL35A ribosomal protein L35a -0.0160271
IFI6 interferon, alpha-inducible protein 6 -0.0157063
HMGB1 high mobility group box 1 -0.0156169
LOC102724023 ES1 protein homolog, mitochondrial -0.0155106
GNAS GNAS complex locus -0.0154084
PTPRD protein tyrosine phosphatase, receptor type, D -0.0152526
PDE4B phosphodiesterase 4B, cAMP-specific -0.0151542
NPR2 natriuretic peptide receptor 2 -0.015153
S100A9 S100 calcium binding protein A9 -0.0150543
SCFD2 sec1 family domain containing 2 -0.0150398
DPYD dihydropyrimidine dehydrogenase -0.0150317
NEGR1 neuronal growth regulator 1 -0.0149873
NHSL1 NHS-like 1 -0.0146406
CTSD cathepsin D -0.0145609
PTCHD4 patched domain containing 4 -0.0144975
IFITM1 interferon induced transmembrane protein 1 -0.0142452
BSG basigin (Ok blood group) -0.0142439
OSMR oncostatin M receptor -0.0141247
NBEA neurobeachin -0.0140066
FHIT fragile histidine triad -0.0139222
CAV1 caveolin 1, caveolae protein, 22kDa -0.0138319
COL1A2 collagen, type I, alpha 2 -0.0134988
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0134116
RPS24 ribosomal protein S24 -0.0133023
AGMO alkylglycerol monooxygenase -0.0131311
EBF1 early B-cell factor 1 -0.0130007
CDK14 cyclin-dependent kinase 14 -0.0129979
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0129766
SOX5 SRY (sex determining region Y)-box 5 -0.0129444
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0127215
FTL ferritin, light polypeptide -0.0125691
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0124417
DMD dystrophin -0.0124277
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0123252
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 -0.0122743
ATXN7L1 ataxin 7-like 1 -0.0121337
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0121079
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0120805
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0120576
TNNC1 troponin C type 1 (slow) -0.0118574
NRG1 neuregulin 1 -0.0116984
PAX3 paired box 3 -0.0116612
CENPF centromere protein F, 350/400kDa -0.011563
BICD1 bicaudal D homolog 1 (Drosophila) -0.0111254
SPIDR scaffolding protein involved in DNA repair -0.0110451
HBP1 HMG-box transcription factor 1 -0.0108861
COL19A1 collagen, type XIX, alpha 1 -0.0108683
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0106453
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0104957
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0104565
RANBP17 RAN binding protein 17 -0.0104345
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0104097
NPAS2 neuronal PAS domain protein 2 -0.0103503
IFITM2 interferon induced transmembrane protein 2 -0.0102178
AKAP9 A kinase (PRKA) anchor protein 9 -0.0101265
CCND1 cyclin D1 -0.0101248
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 -0.0101021
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0100516
FGF13 fibroblast growth factor 13 -0.00994893
SSH2 slingshot protein phosphatase 2 -0.00982788
NRXN3 neurexin 3 -0.00978932