Cyclosporin A_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.160309
LAMB3 laminin, beta 3 0.151553
VEGFA vascular endothelial growth factor A 0.135235
NDRG1 N-myc downstream regulated 1 0.131771
PLAU plasminogen activator, urokinase 0.123712
SPTBN1 spectrin, beta, non-erythrocytic 1 0.109864
FLNB filamin B, beta 0.102172
PLEC plectin 0.101296
APP amyloid beta (A4) precursor protein 0.0930177
LAMC2 laminin, gamma 2 0.0861599
ANKRD11 ankyrin repeat domain 11 0.0834048
TNIP1 TNFAIP3 interacting protein 1 0.0823131
SAMD4A sterile alpha motif domain containing 4A 0.0788586
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0745448
EEF2 eukaryotic translation elongation factor 2 0.0738384
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0728339
ANXA2 annexin A2 0.0723405
SPAG9 sperm associated antigen 9 0.0688223
SMAD3 SMAD family member 3 0.0683247
EIF1 eukaryotic translation initiation factor 1 0.065943
ACTG1 actin gamma 1 0.0655541
AHNAK2 AHNAK nucleoprotein 2 0.0648186
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0647571
TRIO trio Rho guanine nucleotide exchange factor 0.0647239
CCNY cyclin Y 0.0646607
GRB10 growth factor receptor-bound protein 10 0.0645363
FAM13A family with sequence similarity 13, member A 0.0642741
TMSB4X thymosin beta 4, X-linked 0.0637486
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0630901
BACE2 beta-site APP-cleaving enzyme 2 0.0621958
CALR calreticulin 0.0610909
DTNA dystrobrevin, alpha 0.0605498
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0603446
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.059661
BHLHE40 basic helix-loop-helix family, member e40 0.0595133
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0591493
PPARD peroxisome proliferator-activated receptor delta 0.059081
FLNA filamin A, alpha 0.0573468
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0568587
LOC112694756 uncharaterized LOC112694756 0.0559167
MACF1 microtubule-actin crosslinking factor 1 0.0538117
KRT8 keratin 8, type II 0.0537383
WSB1 WD repeat and SOCS box containing 1 0.0515775
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.051359
CANX calnexin 0.0513433
RBM39 RNA binding motif protein 39 0.0505532
EZR ezrin 0.0492943
KLF6 Kruppel-like factor 6 0.0480922
OGA O-GlcNAcase 0.046709
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0464379
CTNND1 catenin (cadherin-associated protein), delta 1 0.0464199
APLP2 amyloid beta (A4) precursor-like protein 2 0.0458464
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0457483
RAB1A RAB1A, member RAS oncogene family 0.0449443
JUP junction plakoglobin 0.0446057
AKAP13 A kinase (PRKA) anchor protein 13 0.0444697
HPCAL1 hippocalcin-like 1 0.0439406
RACK1 receptor for activated C kinase 1 0.0439247
COPA coatomer protein complex, subunit alpha 0.0429438
G0S2 G0/G1 switch 2 0.0428613
MYO5B myosin VB 0.0427983
TSC22D2 TSC22 domain family, member 2 0.042771
DDIT4 DNA-damage-inducible transcript 4 0.0421291
HSPA8 heat shock 70kDa protein 8 0.0419763
NPEPPS aminopeptidase puromycin sensitive 0.0419513
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0417202
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0416383
F3 coagulation factor III (thromboplastin, tissue factor) 0.0407949
PGK1 phosphoglycerate kinase 1 0.0402094
UBE2H ubiquitin-conjugating enzyme E2H 0.0400867
PDIA3 protein disulfide isomerase family A, member 3 0.0400164
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0391916
KRT18 keratin 18, type I 0.0391628
HELZ helicase with zinc finger 0.0391484
CSNK1A1 casein kinase 1, alpha 1 0.0390608
IGFBP3 insulin-like growth factor binding protein 3 0.0390566
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0388779
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0388579
ARRDC3 arrestin domain containing 3 0.0386126
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0384786
ANXA1 annexin A1 0.0382579
MED15 mediator complex subunit 15 0.0375738
ELL2 elongation factor, RNA polymerase II, 2 0.0369924
PRRC2C proline-rich coiled-coil 2C 0.0367641
UBA6 ubiquitin-like modifier activating enzyme 6 0.0365632
FOSL1 FOS-like antigen 1 0.036081
HSPG2 heparan sulfate proteoglycan 2 0.0359701
LASP1 LIM and SH3 protein 1 0.0355608
WAC WW domain containing adaptor with coiled-coil 0.035448
PICALM phosphatidylinositol binding clathrin assembly protein 0.0354336
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 0.0346535
SFTPA2 surfactant protein A2 0.0346456
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0342922
JUN jun proto-oncogene 0.0341788
RAB8B RAB8B, member RAS oncogene family 0.0339999
FUS FUS RNA binding protein 0.0339621
MCL1 myeloid cell leukemia 1 0.0338685
ACTN1 actinin, alpha 1 0.0338602
CEP250 centrosomal protein 250kDa 0.0338268
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0335231

decreased expression

Symbol Name Standardized Value
MMP7 matrix metallopeptidase 7 -0.102524
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0971321
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0897814
MT2A metallothionein 2A -0.07142
CP ceruloplasmin (ferroxidase) -0.0659561
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0618397
IFI27 interferon, alpha-inducible protein 27 -0.0553864
EFNA5 ephrin-A5 -0.054183
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0521601
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0472506
C15ORF48 chromosome 15 open reading frame 48 -0.0418695
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0392088
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0382862
TPT1 tumor protein, translationally-controlled 1 -0.0357762
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0346625
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0320017
PDE4D phosphodiesterase 4D, cAMP-specific -0.0316835
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0313407
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0298228
IFI6 interferon, alpha-inducible protein 6 -0.0297579
ZBTB20 zinc finger and BTB domain containing 20 -0.0292428
MX1 MX dynamin-like GTPase 1 -0.0284064
APOL1 apolipoprotein L, 1 -0.0283975
TMSB10 thymosin beta 10 -0.0281666
ISG15 ISG15 ubiquitin-like modifier -0.0280469
PCDH7 protocadherin 7 -0.0275034
HMGA1 high mobility group AT-hook 1 -0.0275033
BLZF1 basic leucine zipper nuclear factor 1 -0.0273056
IFI16 interferon, gamma-inducible protein 16 -0.027282
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0269548
RPLP1 ribosomal protein, large, P1 -0.0267028
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0263478
IFITM1 interferon induced transmembrane protein 1 -0.0255953
S100A6 S100 calcium binding protein A6 -0.0255414
RPS2 ribosomal protein S2 -0.0253137
MX2 MX dynamin-like GTPase 2 -0.0242663
LCN2 lipocalin 2 -0.0240079
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0238091
CDCP1 CUB domain containing protein 1 -0.023626
OSMR oncostatin M receptor -0.023365
SAMD9 sterile alpha motif domain containing 9 -0.0223521
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0219709
IFITM3 interferon induced transmembrane protein 3 -0.0217214
NRG3 neuregulin 3 -0.0215994
MAML2 mastermind-like 2 (Drosophila) -0.0215484
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0210013
PLAT plasminogen activator, tissue -0.0201955
CSTB cystatin B (stefin B) -0.0200756
GCC2 GRIP and coiled-coil domain containing 2 -0.0199769
RAD51B RAD51 paralog B -0.019582
RPS6 ribosomal protein S6 -0.0195292
LY6E lymphocyte antigen 6 complex, locus E -0.0191764
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.019028
PMP22 peripheral myelin protein 22 -0.0190235
SLC38A1 solute carrier family 38, member 1 -0.0189271
MBNL1 muscleblind-like splicing regulator 1 -0.0186146
S100A11 S100 calcium binding protein A11 -0.0185233
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0184551
SGPP2 sphingosine-1-phosphate phosphatase 2 -0.0183897
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0183162
DSTN destrin (actin depolymerizing factor) -0.0182196
TAPBP TAP binding protein (tapasin) -0.0180995
RPS24 ribosomal protein S24 -0.0180837
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0179474
BICC1 BicC family RNA binding protein 1 -0.0177472
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0173142
FTL ferritin, light polypeptide -0.0172728
DSG2 desmoglein 2 -0.0171496
NABP1 nucleic acid binding protein 1 -0.0171025
ITGA1 integrin, alpha 1 -0.0170963
GLIS3 GLIS family zinc finger 3 -0.0168759
RIGI RNA sensor RIG-I -0.0167702
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0166166
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4 -0.0165713
ADAM28 ADAM metallopeptidase domain 28 -0.0165437
IFIH1 interferon induced with helicase C domain 1 -0.0164197
CNRIP1 cannabinoid receptor interacting protein 1 -0.0159329
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0157286
SP100 SP100 nuclear antigen -0.0156682
TMC5 transmembrane channel-like 5 -0.0156668
RABGAP1L RAB GTPase activating protein 1-like -0.0156163
RPS19 ribosomal protein S19 -0.0156013
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0153315
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0153085
ANTXR2 anthrax toxin receptor 2 -0.01517
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0150648
DPYD dihydropyrimidine dehydrogenase -0.0149479
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0148988
RPL19 ribosomal protein L19 -0.0148035
RPS29 ribosomal protein S29 -0.0144502
UTRN utrophin -0.014399
IRAK3 interleukin-1 receptor-associated kinase 3 -0.0142046
XAF1 XIAP associated factor 1 -0.0140894
RNF213 ring finger protein 213 -0.0140697
EHBP1 EH domain binding protein 1 -0.0138375
VCAN versican -0.0138242
MBD5 methyl-CpG binding domain protein 5 -0.0138154
IFI44L interferon-induced protein 44-like -0.0133883
IFI44 interferon-induced protein 44 -0.0133497
NRP1 neuropilin 1 -0.0132607