Cyclosporin A_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.268665
EEF2 eukaryotic translation elongation factor 2 0.11488
NDRG1 N-myc downstream regulated 1 0.104027
VEGFA vascular endothelial growth factor A 0.0915883
FAM13A family with sequence similarity 13, member A 0.0872312
FNDC3B fibronectin type III domain containing 3B 0.0858232
MYH9 myosin, heavy chain 9, non-muscle 0.0709447
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0699985
WDR45B WD repeat domain 45B 0.0644673
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0623373
CEMIP cell migration inducing protein, hyaluronan binding 0.0622672
SEPTIN9 septin 9 0.0594874
ZMIZ1 zinc finger, MIZ-type containing 1 0.0566682
HELZ helicase with zinc finger 0.0539353
ERRFI1 ERBB receptor feedback inhibitor 1 0.0532936
AKAP12 A kinase (PRKA) anchor protein 12 0.0516291
DDIT4 DNA-damage-inducible transcript 4 0.0466213
RPL3 ribosomal protein L3 0.0446401
COPA coatomer protein complex, subunit alpha 0.0431193
WAC WW domain containing adaptor with coiled-coil 0.0431118
COL18A1 collagen, type XVIII, alpha 1 0.0424079
UBA6 ubiquitin-like modifier activating enzyme 6 0.0423316
NUP58 nucleoporin 58 0.0416865
SREBF2 sterol regulatory element binding transcription factor 2 0.041685
LPIN1 lipin 1 0.0416664
PLEC plectin 0.0414868
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0411479
NCOR2 nuclear receptor corepressor 2 0.0409451
STC1 stanniocalcin 1 0.0402983
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0398316
MACF1 microtubule-actin crosslinking factor 1 0.0383382
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0361581
NFE2L1 nuclear factor, erythroid 2-like 1 0.036053
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0358748
TNIP1 TNFAIP3 interacting protein 1 0.0350611
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0350426
SRRM2 serine/arginine repetitive matrix 2 0.0345891
BHLHE40 basic helix-loop-helix family, member e40 0.0336635
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.0330695
RAD23B RAD23 homolog B (S. cerevisiae) 0.0328708
SETD5 SET domain containing 5 0.0324093
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0319352
MEF2A myocyte enhancer factor 2A 0.0317062
NAMPT nicotinamide phosphoribosyltransferase 0.031564
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0311438
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0308682
SSBP3 single stranded DNA binding protein 3 0.0307133
ANKRD11 ankyrin repeat domain 11 0.0305675
TOP1 topoisomerase (DNA) I 0.0302304
HMGB2 high mobility group box 2 0.0300422
FLNB filamin B, beta 0.0296525
GPC5 glypican 5 0.0290765
SMAD3 SMAD family member 3 0.0290272
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.0284449
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0284243
CANX calnexin 0.0284187
ANXA2 annexin A2 0.0283839
HSPA8 heat shock 70kDa protein 8 0.0281934
DDR2 discoidin domain receptor tyrosine kinase 2 0.0279901
ESYT2 extended synaptotagmin-like protein 2 0.0279799
YEATS2 YEATS domain containing 2 0.0278445
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0271931
TOB1 transducer of ERBB2, 1 0.0271502
USP36 ubiquitin specific peptidase 36 0.026941
UBAP2L ubiquitin associated protein 2-like 0.0265485
FTH1 ferritin, heavy polypeptide 1 0.0264465
MED15 mediator complex subunit 15 0.0262782
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0261284
RPTOR regulatory associated protein of MTOR, complex 1 0.0259572
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0258362
VGF VGF nerve growth factor inducible 0.025491
PRRC2C proline-rich coiled-coil 2C 0.0254866
APP amyloid beta (A4) precursor protein 0.0252048
ADAM17 ADAM metallopeptidase domain 17 0.0250831
XPO1 exportin 1 0.0250273
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0249413
RARA retinoic acid receptor, alpha 0.0249257
NONO non-POU domain containing, octamer-binding 0.0245581
PRRC2B proline-rich coiled-coil 2B 0.0244437
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0242451
KMT2C lysine (K)-specific methyltransferase 2C 0.02423
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0242197
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0241566
ARHGDIA Rho GDP dissociation inhibitor (GDI) alpha 0.0240151
OGA O-GlcNAcase 0.0239977
PICALM phosphatidylinositol binding clathrin assembly protein 0.0239369
KDM3A lysine (K)-specific demethylase 3A 0.023837
ARRDC3 arrestin domain containing 3 0.0234868
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0234286
NFYA nuclear transcription factor Y, alpha 0.0233305
PKM pyruvate kinase, muscle 0.0232087
DENND4C DENN/MADD domain containing 4C 0.0230728
WDR43 WD repeat domain 43 0.0228783
SQSTM1 sequestosome 1 0.0227239
CASC3 cancer susceptibility candidate 3 0.0227192
MEF2D myocyte enhancer factor 2D 0.0223961
LIMCH1 LIM and calponin homology domains 1 0.0221263
SET SET nuclear proto-oncogene 0.0220689
DTNA dystrobrevin, alpha 0.0220507
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0220085

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.243429
LSAMP limbic system-associated membrane protein -0.154297
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.153353
SYT1 synaptotagmin I -0.115223
VCL vinculin -0.103687
FMN1 formin 1 -0.0919114
RPS6 ribosomal protein S6 -0.0755829
TLE4 transducin-like enhancer of split 4 -0.0750559
RPLP1 ribosomal protein, large, P1 -0.0727227
BPTF bromodomain PHD finger transcription factor -0.0713203
PTPRD protein tyrosine phosphatase, receptor type, D -0.0702429
TPT1 tumor protein, translationally-controlled 1 -0.0684679
RPS24 ribosomal protein S24 -0.0675645
RPL35A ribosomal protein L35a -0.0609941
MBD5 methyl-CpG binding domain protein 5 -0.0603253
RPL34 ribosomal protein L34 -0.0583763
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.058231
RPL38 ribosomal protein L38 -0.05702
KLHL13 kelch-like family member 13 -0.0559653
NALF1 NALCN channel auxiliary factor 1 -0.0553659
RPL19 ribosomal protein L19 -0.0550972
RPL23 ribosomal protein L23 -0.0521177
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0520863
NREP neuronal regeneration related protein -0.0499525
BCAS3 breast carcinoma amplified sequence 3 -0.0497244
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0492055
COL3A1 collagen, type III, alpha 1 -0.0491297
VMP1 vacuole membrane protein 1 -0.0435367
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0430025
PCDH9 protocadherin 9 -0.0422533
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0418363
TMSB10 thymosin beta 10 -0.0416526
SLIT2 slit homolog 2 (Drosophila) -0.0399947
SOS1 son of sevenless homolog 1 (Drosophila) -0.039221
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0391743
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0386831
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0384983
THBS1 thrombospondin 1 -0.0382059
RPL31 ribosomal protein L31 -0.0379744
RPS19 ribosomal protein S19 -0.0375941
IFI16 interferon, gamma-inducible protein 16 -0.037362
PTMA prothymosin, alpha -0.0366018
RPL12 ribosomal protein L12 -0.0361175
RPS23 ribosomal protein S23 -0.0360484
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0355877
DNAH14 dynein, axonemal, heavy chain 14 -0.035549
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0352504
RPL37A ribosomal protein L37a -0.0345275
ZBTB20 zinc finger and BTB domain containing 20 -0.0340158
MEIS2 Meis homeobox 2 -0.0339059
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0336682
PDZRN3 PDZ domain containing ring finger 3 -0.0331661
RPS12 ribosomal protein S12 -0.0326634
FTL ferritin, light polypeptide -0.0322591
RPS2 ribosomal protein S2 -0.0317221
EIF1 eukaryotic translation initiation factor 1 -0.0312861
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.030795
ACTG1 actin gamma 1 -0.03043
TCF12 transcription factor 12 -0.0303613
S100A9 S100 calcium binding protein A9 -0.0303505
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0299541
THSD4 thrombospondin, type I, domain containing 4 -0.0297954
NCAM2 neural cell adhesion molecule 2 -0.0297263
CCDC47 coiled-coil domain containing 47 -0.029706
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0295546
DPH6 diphthamine biosynthesis 6 -0.0294898
GREM2 gremlin 2, DAN family BMP antagonist -0.0294025
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0287064
CNTN4 contactin 4 -0.0286603
FHIT fragile histidine triad -0.028605
RPL9 ribosomal protein L9 -0.0285977
HAND2 heart and neural crest derivatives expressed 2 -0.0284189
TPST1 tyrosylprotein sulfotransferase 1 -0.0280249
GPATCH8 G patch domain containing 8 -0.0279633
TAS2R14 taste receptor, type 2, member 14 -0.0278217
ZNF804A zinc finger protein 804A -0.0277994
COL1A1 collagen, type I, alpha 1 -0.0277666
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0276279
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0274955
RPL27 ribosomal protein L27 -0.0274535
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0273239
PRKCA protein kinase C, alpha -0.0271876
RPL32 ribosomal protein L32 -0.0268704
RIGI RNA sensor RIG-I -0.0266565
DLC1 DLC1 Rho GTPase activating protein -0.0266525
NAP1L1 nucleosome assembly protein 1-like 1 -0.0258975
GATA3 GATA binding protein 3 -0.0258796
RPS14 ribosomal protein S14 -0.025766
IER3 immediate early response 3 -0.0256983
RPL4 ribosomal protein L4 -0.0256941
PDE4D phosphodiesterase 4D, cAMP-specific -0.025663
RPS8 ribosomal protein S8 -0.0256381
EFNA5 ephrin-A5 -0.0251756
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0250708
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0249552
MAPK10 mitogen-activated protein kinase 10 -0.0247354
TRIB2 tribbles pseudokinase 2 -0.0246045
TPM4 tropomyosin 4 -0.0245759
AUTS2 autism susceptibility candidate 2 -0.0245016
KCNT2 potassium channel, sodium activated subfamily T, member 2 -0.0243712