Cyclosporin A_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.13622
MBNL2 muscleblind-like splicing regulator 2 0.10636
DSCAM Down syndrome cell adhesion molecule 0.0844837
NDRG1 N-myc downstream regulated 1 0.0797911
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0770611
PDIA3 protein disulfide isomerase family A, member 3 0.0688776
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0674378
SREBF2 sterol regulatory element binding transcription factor 2 0.0639918
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0601669
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0594877
TXNIP thioredoxin interacting protein 0.0593477
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0555893
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0555882
CANX calnexin 0.0533822
RNF149 ring finger protein 149 0.0497799
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.048922
PTBP3 polypyrimidine tract binding protein 3 0.0478808
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0475104
VEGFA vascular endothelial growth factor A 0.0437413
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0429891
MACC1 metastasis associated in colon cancer 1 0.0417633
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0406067
MYH9 myosin, heavy chain 9, non-muscle 0.0403824
RUNX1 runt-related transcription factor 1 0.0376006
BHLHE40 basic helix-loop-helix family, member e40 0.037396
COPA coatomer protein complex, subunit alpha 0.037279
BTBD9 BTB (POZ) domain containing 9 0.0361609
CALR calreticulin 0.0353301
PTEN phosphatase and tensin homolog 0.035153
ZMYND8 zinc finger, MYND-type containing 8 0.0350822
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0350274
BCLAF1 BCL2-associated transcription factor 1 0.0350084
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0344479
H1-0 H1.0 linker histone 0.034119
ZMYM2 zinc finger, MYM-type 2 0.034057
B2M beta-2-microglobulin 0.0338846
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0336627
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0336105
AHI1 Abelson helper integration site 1 0.0330738
MCTP2 multiple C2 domains, transmembrane 2 0.0315069
FNDC3A fibronectin type III domain containing 3A 0.0314975
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0309463
RNF43 ring finger protein 43 0.030809
KMT2E lysine (K)-specific methyltransferase 2E 0.0305083
NCOR1 nuclear receptor corepressor 1 0.0304469
MKI67 marker of proliferation Ki-67 0.0302428
TMED2 transmembrane emp24 domain trafficking protein 2 0.0296498
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.0295247
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0294061
SEC31A SEC31 homolog A (S. cerevisiae) 0.0292206
RAB1A RAB1A, member RAS oncogene family 0.029089
DIAPH3 diaphanous-related formin 3 0.0288463
STK24 serine/threonine kinase 24 0.0286647
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0282713
OGA O-GlcNAcase 0.0280325
TMPRSS4 transmembrane protease, serine 4 0.0277899
CLTC clathrin, heavy chain (Hc) 0.0276883
FNIP1 folliculin interacting protein 1 0.0275417
AFF1 AF4/FMR2 family, member 1 0.0274368
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0271097
DENND4C DENN/MADD domain containing 4C 0.0270547
IL20RA interleukin 20 receptor, alpha 0.0268732
HELZ helicase with zinc finger 0.0268609
GOLGA4 golgin A4 0.0268059
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 0.0263655
MEIS2 Meis homeobox 2 0.0262989
YEATS2 YEATS domain containing 2 0.0261628
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0261589
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0258876
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0256988
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0256573
SBF2 SET binding factor 2 0.0255991
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0253731
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0253547
FDPS farnesyl diphosphate synthase 0.0252402
NEBL nebulette 0.025215
RAB6A RAB6A, member RAS oncogene family 0.024881
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0248131
LOC112694756 uncharaterized LOC112694756 0.0247044
PTPRF protein tyrosine phosphatase, receptor type, F 0.0244129
ERRFI1 ERBB receptor feedback inhibitor 1 0.0243394
TMEM51 transmembrane protein 51 0.0243271
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0238545
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0238489
EPB41 erythrocyte membrane protein band 4.1 0.0237938
NAMPT nicotinamide phosphoribosyltransferase 0.0237812
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0237386
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0236582
TMEM39A transmembrane protein 39A 0.0236543
COPG1 coatomer protein complex, subunit gamma 1 0.0236113
ESRP1 epithelial splicing regulatory protein 1 0.023567
ANKRD11 ankyrin repeat domain 11 0.0235021
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0234736
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0233936
RHOBTB3 Rho-related BTB domain containing 3 0.0233519
SUCO SUN domain containing ossification factor 0.0232787
AOPEP aminopeptidase O (putative) 0.0231641
TTC3 tetratricopeptide repeat domain 3 0.0230896
ARGLU1 arginine and glutamate rich 1 0.022859
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0227704

decreased expression

Symbol Name Standardized Value
EPSTI1 epithelial stromal interaction 1 (breast) -0.131805
INTS6 integrator complex subunit 6 -0.110568
RNF213 ring finger protein 213 -0.103284
SP100 SP100 nuclear antigen -0.098378
GMDS GDP-mannose 4,6-dehydratase -0.0966261
RIGI RNA sensor RIG-I -0.0951468
STS steroid sulfatase (microsomal), isozyme S -0.0948764
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0910773
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0887797
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0862989
ANXA2 annexin A2 -0.0854068
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.083887
VCL vinculin -0.0833038
MX1 MX dynamin-like GTPase 1 -0.0796883
PLSCR2 phospholipid scramblase 2 -0.0752896
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0727184
LYZ lysozyme -0.0725372
XAF1 XIAP associated factor 1 -0.0707316
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0672523
TSHZ2 teashirt zinc finger homeobox 2 -0.0645136
MX2 MX dynamin-like GTPase 2 -0.0642079
NPSR1 neuropeptide S receptor 1 -0.0634762
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0611806
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0577416
LCN2 lipocalin 2 -0.055542
AREG amphiregulin -0.0540506
IFI6 interferon, alpha-inducible protein 6 -0.0539618
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0494881
C6ORF132 chromosome 6 open reading frame 132 -0.0493755
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0487644
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0469844
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0466633
CATSPERB catsper channel auxiliary subunit beta -0.0464704
LMO7 LIM domain 7 -0.0462807
TPT1 tumor protein, translationally-controlled 1 -0.0461264
TM4SF19 transmembrane 4 L six family member 19 -0.0453879
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0453357
RABGAP1L RAB GTPase activating protein 1-like -0.0447618
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0442312
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0418064
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0413495
TM4SF1 transmembrane 4 L six family member 1 -0.0404705
ARHGAP26 Rho GTPase activating protein 26 -0.0402134
MAML2 mastermind-like 2 (Drosophila) -0.0391069
MUC20 mucin 20, cell surface associated -0.0390996
PMP22 peripheral myelin protein 22 -0.037902
POF1B premature ovarian failure, 1B -0.0375481
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.0370688
IFIH1 interferon induced with helicase C domain 1 -0.0363532
EXT1 exostosin glycosyltransferase 1 -0.0362481
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.03617
PLSCR1 phospholipid scramblase 1 -0.0360352
IGFBP3 insulin-like growth factor binding protein 3 -0.0354422
NABP1 nucleic acid binding protein 1 -0.0350727
MCL1 myeloid cell leukemia 1 -0.034164
ACTG1 actin gamma 1 -0.032629
LPP LIM domain containing preferred translocation partner in lipoma -0.0311454
SAMD9 sterile alpha motif domain containing 9 -0.0309942
ETV6 ets variant 6 -0.0302518
UBAP2 ubiquitin associated protein 2 -0.0295377
TMSB10 thymosin beta 10 -0.0293982
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0290506
IFI27 interferon, alpha-inducible protein 27 -0.0289196
NCEH1 neutral cholesterol ester hydrolase 1 -0.0287689
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 -0.0283885
PERP PERP, TP53 apoptosis effector -0.0283361
TNS4 tensin 4 -0.0282925
FBXO39 F-box protein 39 -0.0279745
LAMA4 laminin, alpha 4 -0.0275059
PRKCA protein kinase C, alpha -0.0272221
RAB7A RAB7A, member RAS oncogene family -0.0271519
NCOA7 nuclear receptor coactivator 7 -0.026035
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0260322
PHF3 PHD finger protein 3 -0.026026
CEMIP cell migration inducing protein, hyaluronan binding -0.0253646
LAP3 leucine aminopeptidase 3 -0.0249394
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 -0.024502
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0244423
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0239385
FTL ferritin, light polypeptide -0.0238157
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.023595
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0235791
AKAP13 A kinase (PRKA) anchor protein 13 -0.0235407
IFITM3 interferon induced transmembrane protein 3 -0.0228777
ANKRD10 ankyrin repeat domain 10 -0.0228242
CUX1 cut-like homeobox 1 -0.0225398
SAMD9L sterile alpha motif domain containing 9-like -0.0225286
IER3 immediate early response 3 -0.0223752
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 -0.0223328
PTMA prothymosin, alpha -0.0222394
POU2F2 POU class 2 homeobox 2 -0.0222279
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0221508
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0221235
ZNFX1 zinc finger, NFX1-type containing 1 -0.0220547
BCL2L1 BCL2-like 1 -0.0219464
USP53 ubiquitin specific peptidase 53 -0.0219205
MCTP1 multiple C2 domains, transmembrane 1 -0.0217401
EPB41L1 erythrocyte membrane protein band 4.1-like 1 -0.0214176
MSI2 musashi RNA-binding protein 2 -0.0212847
OASL 2'-5'-oligoadenylate synthetase-like -0.0209791